evm.TU.contig_38760 (Carica papaya)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 evm.TU.contig_38760 T258116_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
evm.TU.contig_38760.1 MADS box 10 54

Links

Other MADS box family TFs
Other Carica papaya TFs

75 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30128.m008984 Ricinus communis 30128.m008984 I 0.000
30199.m000879 Ricinus communis 30199.m000879 I 0.702
cassava19828.m1 Manihot esculenta cassava19828.m1 I 0.000
Ciclev10006519m.g Citrus clementina Ciclev10006519m.g I 0.000
Ciclev10013728m.g Citrus clementina Ciclev10013728m.g I 0.000
evm.TU.contig_25049.5 Carica papaya evm.TU.contig_25049.5 I 0.809
evm.TU.contig_26058.1 Carica papaya evm.TU.contig_26058.1 I 0.778
evm.TU.contig_27586 Carica papaya evm.TU.contig_27586 I 0.955
evm.TU.contig_28448.4 Carica papaya evm.TU.contig_28448.4 I 0.867
evm.TU.contig_38146 Carica papaya evm.TU.contig_38146 I 0.773
evm.TU.contig_40499.2 Carica papaya evm.TU.contig_40499.2 I 0.867
gene18029-v1.0-hybrid Fragaria vesca gene18029-v1.0-hybrid I 0.729
gene22967-v1.0-hybrid Fragaria vesca gene22967-v1.0-hybrid I 0.708
Pm003257 Prunus mume Pm003257 I 0.000
Pm004396 Prunus mume Pm004396 I 0.778
POPTR_0013s00350 Populus trichocarpa POPTR_0013s00350 I 0.000
POPTR_0013s01880 Populus trichocarpa POPTR_0013s01880 I 0.000
PRUPE_ppa018168mg Prunus persica PRUPE_ppa018168mg I 0.778
PRUPE_ppa019749mg Prunus persica PRUPE_ppa019749mg I 0.000
SapurV1A.0066s0310 Salix purpurea SapurV1A.0066s0310 I 0.702
TCM_025670 Theobroma cacao TCM_025670 I 0.000
TCM_025671 Theobroma cacao TCM_025671 I 0.000
TCM_026842 Theobroma cacao TCM_026842 I 0.711
TCM_026845 Theobroma cacao TCM_026845 I 0.000
TCM_042799 Theobroma cacao TCM_042799 I 0.000
TCM_042848 Theobroma cacao TCM_042848 N 0.000
VIT_14s0060g00300 Vitis vinifera VIT_14s0060g00300 I 0.000