CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Thhalv10027901m.g
(
Eutrema salsugineum
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
Thhalv10027901m.g
T299309_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Thhalv10027901m
NAC/NAM
9
144
PVGFRFRPTDCEISNYFLTRKALGQPMNTRIVPEECHDIFSRRPRDLPGYPREKHWYFYCRKLKDQVTTTTNTSSHNIWTQIEEETDVLDAKNNDALVGIKRSFTLVENDEESDDIYLSDEEEPPKYNWFMDEISL
Links
Other
NAC/NAM
family TFs
Other
Eutrema salsugineum
TFs
17 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
29692.m000540
Ricinus communis
29692.m000540
N
0.000
AMTR_s00010p00148880
Amborella trichopoda
AMTR_s00010p00148880
N
0.000
GAI
Arabidopsis thaliana
AT1G14920
N
0.000
SLR1
Oryza indica
BGIOSGA013420
N
0.000
BRADI1G11090
Brachypodium distachyon
BRADI1G11090
N
0.000
Cagra.3501s0003
Capsella grandiflora
Cagra.3501s0003
N
0.000
Carubv10008833m.g
Capsella rubella
Carubv10008833m.g
N
0.000
cassava14484.m1
Manihot esculenta
cassava14484.m1
N
0.000
cassava15077.m1
Manihot esculenta
cassava15077.m1
N
0.000
cassava6237.valid.m1
Manihot esculenta
cassava6237.valid.m1
I
0.000
Ca_05046
Cicer arietinum
Ca_05046
N
0.000
Ca_13295
Cicer arietinum
Ca_13295
I
0.000
Ciclev10011367m.g
Citrus clementina
Ciclev10011367m.g
N
0.000
Cla003996
Citrullus lanatus
Cla003996
N
0.000
Eucgr.G02163
Eucalyptus grandis
Eucgr.G02163
N
0.000
Eucgr.J01594
Eucalyptus grandis
Eucgr.J01594
I
0.000
evm.TU.supercontig_116.43
Carica papaya
evm.TU.supercontig_116.43
I
0.000
evm.TU.supercontig_2.240
Carica papaya
evm.TU.supercontig_2.240
I
0.000
F775_03572
Aegilops tauschii
F775_03572
N
0.000
GLYMA08G10140
Glycine max
GLYMA08G10140
N
0.000
GLYMA11G33720
Glycine max
GLYMA11G33720
I
0.000
GLYMA18G04500
Glycine max
GLYMA18G04500
I
0.000
Gorai.001G089400
Gossypium raimondii
Gorai.001G089400
I
0.000
Gorai.002G177000
Gossypium raimondii
Gorai.002G177000
N
0.000
GRMZM2G024973
Zea mays
GRMZM2G024973
N
0.000
GRMZM2G144744
Zea mays
GRMZM2G144744
N
0.000
LjT15P09.140.nc
Lotus japonicus
LjT15P09.140.nc
N
0.000
LjT40K11.90.nc
Lotus japonicus
LjT40K11.90.nc
N
0.000
LPERR03G26000
Leersia perrieri
LPERR03G26000
N
0.000
Lus10017626.g
Linum usitatissimum
Lus10017626.g
N
0.000
Lus10033583.g
Linum usitatissimum
Lus10033583.g
N
0.000
MDP0000669451
Malus domestica
MDP0000669451
I
0.000
mgf008289m
Mimulus guttatus
mgf008289m
N
0.000
MLOC_67940
Hordeum vulgare
MLOC_67940
N
0.000
MTR_3g065980
Medicago truncatula
MTR_3g065980
N
0.000
OB03G38380
Oryza brachyantha
OB03G38380
N
0.000
OBART03G31370
Oryza barthii
OBART03G31370
N
0.000
OGLUM03G31610
Oryza glumaepatula
OGLUM03G31610
N
0.000
OLONG_002563
Oryza longistaminata
OLONG_002563
N
0.000
OMERI03G27970
Oryza meridionalis
OMERI03G27970
N
0.000
ONIVA03G32670
Oryza nivara
ONIVA03G32670
N
0.000
OPUNC03G28530
Oryza punctata
OPUNC03G28530
N
0.000
orange1.1g008153m.g
Citrus sinensis
orange1.1g008153m.g
N
0.000
ORGLA03G0290200
Oryza glaberrima
ORGLA03G0290200
N
0.000
ORUFI03G32650
Oryza rufipogon
ORUFI03G32650
N
0.000
SLR1
Oryza sativa
OS03G0707600
N
0.000
Pavir.Ia00840
Panicum virgatum
Pavir.Ia00840
N
0.000
Pavir.Ib04357
Panicum virgatum
Pavir.Ib04357
N
0.000
PGSC0003DMG400015692
Solanum tuberosum
PGSC0003DMG400015692
N
0.000
PK14700.1
Cannabis sativa
PK14700.1
N
0.000
Pm014329
Prunus mume
Pm014329
I
0.000
POPTR_0004s08890
Populus trichocarpa
POPTR_0004s08890
I
0.000
POPTR_0005s14540
Populus trichocarpa
POPTR_0005s14540
I
0.000
POPTR_0008s13090
Populus trichocarpa
POPTR_0008s13090
N
0.000
POPTR_0010s12080
Populus trichocarpa
POPTR_0010s12080
N
0.000
PRUPE_ppa003206mg
Prunus persica
PRUPE_ppa003206mg
I
0.000
SapurV1A.0015s0210
Salix purpurea
SapurV1A.0015s0210
N
0.000
SapurV1A.0102s0220
Salix purpurea
SapurV1A.0102s0220
N
0.000
SapurV1A.0405s0090
Salix purpurea
SapurV1A.0405s0090
N
0.000
Sb01g010660
Sorghum bicolor
Sb01g010660
N
0.000
Solyc11g011260.1
Solanum lycopersicum
Solyc11g011260.1
N
0.000
TCM_010965
Theobroma cacao
TCM_010965
N
0.000
TCM_019165
Theobroma cacao
TCM_019165
N
0.000
Thhalv10007323m.g
Eutrema salsugineum
Thhalv10007323m.g
N
0.000
Traes_4AL_77F4CC833
Triticum aestivum
Traes_4AL_77F4CC833
N
0.000
Traes_4BS_2EE4988CD
Triticum aestivum
Traes_4BS_2EE4988CD
N
0.000
Traes_4DS_ADBA6E30A
Triticum aestivum
Traes_4DS_ADBA6E30A
N
0.000
TRIUR3_18790
Triticum urartu
TRIUR3_18790
N
0.000
GAI1
Vitis vinifera
VIT_01s0011g05260
N
0.000
VIT_14s0006g00640
Vitis vinifera
VIT_14s0006g00640
I
0.000