ENSBTAP00000027633-D1 (Bos grunniens)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 ENSBTAP00000027633-D1 T333677_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Sox8
M00197_2.00 		Mus musculus
NNNWBAAT
ATTVWNNN		 PBM
Badis et al.(2009)
Sox8_1733 		0.208 1.000
SOX8
M03483_2.00 		Homo sapiens
AACAATRTGCAGTGTT
AACACTGCAYATTGTT		 SELEX
Jolma et al.(2013)
SOX8_1 		0.208 1.000
SOX8
M03484_2.00 		Homo sapiens
ATGAATTKCAGTC
GACTGMAATTCAT		 SELEX
Jolma et al.(2013)
SOX8_2 		0.208 1.000
SOX8
M03485_2.00 		Homo sapiens
RAACAATTKCAGTGTTN
NAACACTGMAATTGTTY		 SELEX
Jolma et al.(2013)
SOX8_3 		0.208 1.000
SOX8
M03486_2.00 		Homo sapiens
HATCAATTKCAGTGATN
NATCACTGMAATTGATD		 SELEX
Jolma et al.(2013)
SOX8_4 		0.208 1.000
SOX8
M03487_2.00 		Homo sapiens
TGAATRTKCAGTCA
TGACTGMAYATTCA		 SELEX
Jolma et al.(2013)
SOX8_5 		0.208 1.000
SOX8
M03488_2.00 		Homo sapiens
AACAATTDCAGTGTT
AACACTGHAATTGTT		 SELEX
Jolma et al.(2013)
SOX8_6 		0.208 1.000
SOX8
M03489_2.00 		Homo sapiens
ATGAATTKCAGTC
GACTGMAATTCAT		 SELEX
Jolma et al.(2013)
SOX8_7 		0.208 1.000
SOX8
M03490_2.00 		Homo sapiens
MATCAATTGCAGTGATK
MATCACTGCAATTGATK		 SELEX
Jolma et al.(2013)
SOX8_8 		0.208 1.000
SOX8
M05749_2.00 		Homo sapiens
NDAACAATRV
BYATTGTTHN		 SELEX
Yin et al.(2017)
SOX8_eDBD_HT-SELEX 		0.208 1.000
SOX8
M05751_2.00 		Homo sapiens
ACAATRVNNBYATTGT
ACAATRVNNBYATTGT		 SELEX
Yin et al.(2017)
SOX8_FL_HT-SELEX 		0.208 1.000
SOX8
M05750_2.00 		Homo sapiens
BYATTGTTNN
NNAACAATRV		 SELEX
Yin et al.(2017)
SOX8_eDBD_Methyl-HT-SELEX 		0.208 1.000
SOX8
M05752_2.00 		Homo sapiens
ACAATRVNNBYATTGT
ACAATRVNNBYATTGT		 SELEX
Yin et al.(2017)
SOX8_FL_Methyl-HT-SELEX 		0.208 1.000
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSBTAP00000027633-D1 Sox 1 36

Links

Other Sox family TFs
Other Bos grunniens TFs

228 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
67303 Aureococcus anophagefferens 67303 N 0.594
68433 Aureococcus anophagefferens 68433 N 0.418
AAEL000771 Aedes aegypti AAEL000771 N 0.652
AALB009772 Anopheles albimanus AALB009772 N 0.577
AALB009867 Anopheles albimanus AALB009867 N 0.689
Aan_R006397 Calypte anna Aan_R006397 N 0.542
AARA000825 Anopheles arabiensis AARA000825 N 0.469
AATE015714 Anopheles atroparvus AATE015714 N 0.583
AATE016483 Anopheles atroparvus AATE016483 N 0.635
ACEP10857 Atta cephalotes ACEP10857 N 0.521
ACEP25851 Atta cephalotes ACEP25851 N 0.583
ACHR008996 Anopheles christyi ACHR008996 N 0.433
ACOM022799 Anopheles coluzzii ACOM022799 N 0.689
ACOM026653 Anopheles coluzzii ACOM026653 N 0.577
ACUA008827 Anopheles culicifacies ACUA008827 N 0.631
ACUA010594 Anopheles culicifacies ACUA010594 N 0.696
ACUA012732 Anopheles culicifacies ACUA012732 N 0.652
ADIR005631 Anopheles dirus ADIR005631 N 0.620
ADIR009661 Anopheles dirus ADIR009661 N 0.577
AEPI003629 Anopheles epiroticus AEPI003629 N 0.696
AEPI007652 Anopheles epiroticus AEPI007652 N 0.629
AEPI007948 Anopheles epiroticus AEPI007948 N 0.652
Afo_R011382 Aptenodytes forsteri Afo_R011382 N 0.467
Afo_R012388 Aptenodytes forsteri Afo_R012388 N 0.686
Afo_R012670 Aptenodytes forsteri Afo_R012670 N 0.599
AFUN006689 Anopheles funestus AFUN006689 N 0.629
AFUN009317 Anopheles funestus AFUN009317 N 0.652
AFUN010198 Anopheles funestus AFUN010198 N 0.696
AGAP028091 Anopheles gambiae AGAP028091 N 0.659
ALUE_0000245701 Ascaris lumbricoides ALUE_0000245701 N 0.696
ALUE_0000639901 Ascaris lumbricoides ALUE_0000639901 N 0.687
AMAM004028 Anopheles maculatus AMAM004028 N 0.629
AMAM023617 Anopheles maculatus AMAM023617 N 0.652
AMEC000538 Anopheles melas AMEC000538 I 0.440
AMEC007393 Anopheles melas AMEC007393 N 0.629
AMEC011653 Anopheles melas AMEC011653 N 0.652
AMEM002834 Anopheles merus AMEM002834 N 0.652
AMEM007694 Anopheles merus AMEM007694 N 0.601
AMIN001220 Anopheles minimus AMIN001220 N 0.629
AMIN009302 Anopheles minimus AMIN009302 N 0.696
ANCDUO_13942 Ancylostoma duodenale ANCDUO_13942 N 0.594
AQUA001261 Anopheles quadriannulatus AQUA001261 N 0.689
AQUA005880 Anopheles quadriannulatus AQUA005880 N 0.577
ASIS001889 Anopheles sinensis ASIS001889 N 0.558
ASTEI06131 Anopheles stephensi ASTEI06131 N 0.652
ASTEI06408 Anopheles stephensi ASTEI06408 N 0.620
BGIBMGA003081 Bombyx mori BGIBMGA003081 N 0.696
BGLB010902 Biomphalaria glabrata BGLB010902 N 0.606
Brh_R004116 Buceros rhinoceros Brh_R004116 N 0.503
Brh_R007868 Buceros rhinoceros Brh_R007868 N 0.467
CBN19486 Caenorhabditis brenneri CBN19486 N 0.435
CBN25334 Caenorhabditis brenneri CBN25334 N 0.448
Cla016375 Citrullus lanatus Cla016375 N 0.516
CLEC006960 Cimex lectularius CLEC006960 N 0.696
CMQ_5875 Grosmannia clavigera CMQ_5875 N 0.418
Cmyd_10006594 Chelonia mydas Cmyd_10006594 N 0.686
Cmyd_10009600 Chelonia mydas Cmyd_10009600 N 0.427
CNM02020 Cryptococcus neoformans CNM02020 N 0.433
CPIJ012041 Culex quinquefasciatus CPIJ012041 N 0.689
CPIJ012498 Culex quinquefasciatus CPIJ012498 N 0.565
CPIJ014017 Culex quinquefasciatus CPIJ014017 N 0.629
CpipJ_CPIJ012041 Culex pipiens CpipJ_CPIJ012041 N 0.689
CpipJ_CPIJ012498 Culex pipiens CpipJ_CPIJ012498 N 0.565
CpipJ_CPIJ014017 Culex pipiens CpipJ_CPIJ014017 N 0.629
D918_08317 Trichuris suis D918_08317 N 0.464
DAPPUDRAFT_113704 Daphnia pulex DAPPUDRAFT_113704 N 0.635
DAPPUDRAFT_259784 Daphnia pulex DAPPUDRAFT_259784 N 0.449
DDB_G0287073 Dictyostelium discoideum DDB_G0287073 N 0.563
DILT_0001419401 Diphyllobothrium latum DILT_0001419401 N 0.454
ECPE_0001383301 Echinostoma caproni ECPE_0001383301 N 0.500
EDI_065970 Entamoeba dispar EDI_065970 N 0.456
EFA85451.1 Polysphondylium pallidum EFA85451.1 N 0.487
ENSAMXG00000003325 Astyanax mexicanus ENSAMXG00000003325 N 0.437
ENSAMXG00000017231 Astyanax mexicanus ENSAMXG00000017231 I 0.680
ENSAPLG00000003216 Anas platyrhynchos ENSAPLG00000003216 N 0.686
ENSAPLG00000008530 Anas platyrhynchos ENSAPLG00000008530 N 0.467
ENSAPLG00000010204 Anas platyrhynchos ENSAPLG00000010204 N 0.730
ENSAPLG00000013168 Anas platyrhynchos ENSAPLG00000013168 I 0.682
SOX8 Callithrix jacchus ENSCJAG00000002684 I 0.686
SOX18 Callithrix jacchus ENSCJAG00000022379 N 0.534
ENSCSAG00000016751 Chlorocebus sabaeus ENSCSAG00000016751 N 0.724
SOX18 Dasypus novemcinctus ENSDNOG00000036237 N 0.730
SOX12 Dasypus novemcinctus ENSDNOG00000044763 N 0.462
Sox6 Dipodomys ordii ENSDORG00000013073 N 0.477
SOX8 Equus caballus ENSECAG00000016320 I 0.473
SOX18 Echinops telfairi ENSETEG00000001816 N 0.449
SOX10 Echinops telfairi ENSETEG00000012633 I 0.679
SOX8 Echinops telfairi ENSETEG00000015470 N 0.686
SOX9 Echinops telfairi ENSETEG00000020237 I 0.679
ENSFALG00000011068 Ficedula albicollis ENSFALG00000011068 N 0.542
SOX8 Felis catus ENSFCAG00000004219 N 0.686
ENSFCAG00000015685 Felis catus ENSFCAG00000015685 I 0.682
SOX2 Felis catus ENSFCAG00000029205 I 0.627
ENSGALG00000023601 Gallus gallus ENSGALG00000023601 N 0.469
ENSLOCG00000011834 Lepisosteus oculatus ENSLOCG00000011834 I 0.456
ENSMGAG00000006336 Meleagris gallopavo ENSMGAG00000006336 N 0.467
ENSMGAG00000006624 Meleagris gallopavo ENSMGAG00000006624 N 0.730
SOX8 Microcebus murinus ENSMICG00000011516 I 0.686
SOX9 Myotis lucifugus ENSMLUG00000030312 I 0.682
Hmg20b Mus musculus ENSMUSG00000020232 D 0.616
Sox17 Mus musculus ENSMUSG00000025902 D 0.724
ENSNLEG00000002693 Nomascus leucogenys ENSNLEG00000002693 N 0.578
ENSNLEG00000008488 Nomascus leucogenys ENSNLEG00000008488 I 0.208
ENSOANG00000002448 Ornithorhynchus anatinus ENSOANG00000002448 I 0.592
ENSOANG00000011188 Ornithorhynchus anatinus ENSOANG00000011188 I 0.702
SOX9 Ochotona princeps ENSOPRG00000007860 N 0.460
ENSP00000409273 Macaca fascicularis ENSP00000409273 I 0.682
ENSPANG00000005859 Papio anubis ENSPANG00000005859 I 0.427
SOX2 Procavia capensis ENSPCAG00000003690 I 0.627
ENSPCAG00000014137 Procavia capensis ENSPCAG00000014137 N 0.449
SOX18 Procavia capensis ENSPCAG00000015663 N 0.724
ENSPMAG00000004519 Petromyzon marinus ENSPMAG00000004519 N 0.564
ENSPSIG00000016857 Pelodiscus sinensis ENSPSIG00000016857 N 0.536
SOX18 Pan troglodytes ENSPTRG00000030459 I 0.717
BBX Sorex araneus ENSSARG00000008353 N 0.477
SOX17 Sorex araneus ENSSARG00000009573 I 0.717
ENSSHAG00000008406 Sarcophilus harrisii ENSSHAG00000008406 I 0.682
ENSSTOG00000011011 Ictidomys tridecemlineatus ENSSTOG00000011011 I 0.434
SOX9 Tupaia belangeri ENSTBEG00000000175 N 0.679
sox9a Tetraodon nigroviridis ENSTNIG00000001901 N 0.682
ENSTSYG00000001164 Tarsius syrichta ENSTSYG00000001164 I 0.643
ENSTSYG00000006321 Tarsius syrichta ENSTSYG00000006321 I 0.686
LEF1 Tursiops truncatus ENSTTRG00000008109 N 0.439
ENSTTRG00000015548 Tursiops truncatus ENSTTRG00000015548 I 0.708
TCF7L2 Vicugna pacos ENSVPAG00000008158 N 0.449
ENSVPAG00000008729 Vicugna pacos ENSVPAG00000008729 N 0.477
estExt_fgeneshDP_kg.C_1020010 Dictyostelium purpureum estExt_fgeneshDP_kg.C_1020010 N 0.557
e_gw.60.194.1 Branchiostoma floridae e_gw.60.194.1 N 0.419
F443_09320 Phytophthora parasitica F443_09320 N 0.532
fgenesh1_pg.C_scaffold_11000031 Sporobolomyces roseus fgenesh1_pg.C_scaffold_11000031 N 0.476
fgenesh1_pm.C_scaffold_23000166 Phytophthora capsici fgenesh1_pm.C_scaffold_23000166 N 0.523
fgenesh_scip_prom.28083.3150 Phytophthora lateralis fgenesh_scip_prom.28083.3150 N 0.523
GB40963 Apis mellifera GB40963 N 0.437
Gfo_R008143 Geospiza fortis Gfo_R008143 N 0.542
GLOINDRAFT_25375 Rhizophagus irregularis GLOINDRAFT_25375 N 0.432
GLOINDRAFT_271935 Rhizophagus irregularis GLOINDRAFT_271935 N 0.512
GLOINDRAFT_335861 Rhizophagus irregularis GLOINDRAFT_335861 N 0.599
GLOINDRAFT_346686 Rhizophagus irregularis GLOINDRAFT_346686 N 0.440
GLOINDRAFT_83691 Rhizophagus irregularis GLOINDRAFT_83691 N 0.477
GLOTRDRAFT_8101 Gloeophyllum trabeum GLOTRDRAFT_8101 N 0.494
GLYMA20G01570 Glycine max GLYMA20G01570 N 0.495
Gorai.005G106800 Gossypium raimondii Gorai.005G106800 N 0.538
GPLIN_000970900 Globodera pallida GPLIN_000970900 N 0.504
GPUH_0000499601 Gongylonema pulchrum GPUH_0000499601 N 0.608
Hba_21281 Heterorhabditis bacteriophora Hba_21281 N 0.513
HelroG68905 Helobdella robusta HelroG68905 N 0.550
HHAL000218-PA Halyomorpha halys HHAL000218-PA N 0.641
HHAL001293-PA Halyomorpha halys HHAL001293-PA N 0.583
HHAL001583-PA Halyomorpha halys HHAL001583-PA N 0.560
HMEL002398 Heliconius melpomene HMEL002398 I 0.420
HMEL013676 Heliconius melpomene HMEL013676 N 0.653
HmN_000301900 Hymenolepis microstoma HmN_000301900 N 0.576
Hsal_04827--XP_001122993.1_APIME Harpegnathos saltator Hsal_04827--XP_001122993.1_APIME N 0.454
Hsal_05005--XP_001122373.1_APIME Harpegnathos saltator Hsal_05005--XP_001122373.1_APIME N 0.475
ISCW001638 Ixodes scapularis ISCW001638 N 0.653
JL09_g5343 Pichia kudriavzevii JL09_g5343 N 0.547
K443DRAFT_58201 Laccaria amethystina K443DRAFT_58201 N 0.487
L798_00185 Zootermopsis nevadensis L798_00185 N 0.619
L798_05432 Zootermopsis nevadensis L798_05432 N 0.561
L798_12046 Zootermopsis nevadensis L798_12046 N 0.696
L898_g4879 Steinernema monticolum L898_g4879 N 0.643
LACBIDRAFT_169971 Laccaria bicolor LACBIDRAFT_169971 N 0.487
LbrM.21.1660 Leishmania braziliensis LbrM.21.1660 N 0.444
LCUP001586 Lucilia cuprina LCUP001586 N 0.499
LDEC017494 Leptinotarsa decemlineata LDEC017494 N 0.689
LDEC018263 Leptinotarsa decemlineata LDEC018263 N 0.651
LDEC019307 Leptinotarsa decemlineata LDEC019307 N 0.495
LotgiG143673 Lottia gigantea LotgiG143673 N 0.664
M404DRAFT_787968 Pisolithus tinctorius M404DRAFT_787968 N 0.565
M422DRAFT_54734 Sphaerobolus stellatus M422DRAFT_54734 N 0.537
M7I_1506 Glarea lozoyensis M7I_1506 N 0.419
MELLADRAFT_86211 Melampsora laricipopulina MELLADRAFT_86211 N 0.426
MESCA006364 Megaselia scalaris MESCA006364 N 0.578
MESCA012239 Megaselia scalaris MESCA012239 I 0.547
Minc18937 Meloidogyne incognita Minc18937 N 0.561
MPER_06248 Moniliophthora perniciosa MPER_06248 N 0.633
Myotis_brandtii_Hmgb2_10029741 Myotis brandtii Myotis_brandtii_Hmgb2_10029741 N 0.578
Myotis_brandtii_SOX2_10019709 Myotis brandtii Myotis_brandtii_SOX2_10019709 I 0.440
Myotis_brandtii_TFAM_10031378 Myotis brandtii Myotis_brandtii_TFAM_10031378 N 0.443
Myotis_brandtii_TIMM8A_10019481 Myotis brandtii Myotis_brandtii_TIMM8A_10019481 N 0.571
OESDEN_19415 Oesophagostomum dentatum OESDEN_19415 N 0.594
Ogr00751 Ophisaurus gracilis Ogr00751 I 0.686
Ogr08337 Ophisaurus gracilis Ogr08337 N 0.513
Ogr11176 Ophisaurus gracilis Ogr11176 N 0.720
Ogr13852 Ophisaurus gracilis Ogr13852 N 0.557
PEQ_0000549401 Parascaris equorum PEQ_0000549401 N 0.661
PHUM433280 Pediculus humanus PHUM433280 N 0.656
Phyra76615 Phytophthora ramorum Phyra76615 N 0.523
Physo127875 Phytophthora sojae Physo127875 N 0.523
PK00252.1 Cannabis sativa PK00252.1 N 0.529
PLEOSDRAFT_1017219 Pleurotus ostreatus PLEOSDRAFT_1017219 N 0.490
POSPLDRAFT_103238 Postia placenta POSPLDRAFT_103238 N 0.434
PPA11045 Pristionchus pacificus PPA11045 N 0.467
PPAI003639 Phlebotomus papatasi PPAI003639 N 0.471
PPAI005428 Phlebotomus papatasi PPAI005428 N 0.548
PredSwiss_ASS2010_3779.1 Pneumocystis carinii PredSwiss_ASS2010_3779.1 N 0.626
PredSwiss_CON1835.1 Pneumocystis carinii PredSwiss_CON1835.1 N 0.626
PSEUBRA_SCAF2g02551 Pseudozyma brasiliensis PSEUBRA_SCAF2g02551 N 0.439
PXEA_0002992801 Protopolystoma xenopodis PXEA_0002992801 N 0.498
RPRC001038 Rhodnius prolixus RPRC001038 N 0.550
SapurV1A.0237s0190 Salix purpurea SapurV1A.0237s0190 N 0.449
SCLCIDRAFT_59496 Scleroderma citrinum SCLCIDRAFT_59496 N 0.494
SINV16572 Solenopsis invicta SINV16572 N 0.659
SINV19749 Solenopsis invicta SINV19749 N 0.628
SINV24165 Solenopsis invicta SINV24165 N 0.479
Sjc_0107520 Schistosoma japonicum Sjc_0107520 N 0.498
SMAR007058 Strigamia maritima SMAR007058 N 0.650
SMAR010125 Strigamia maritima SMAR010125 N 0.585
SMU15030186 Schmidtea mediterranea SMU15030186 N 0.508
SPER_0001708101 Spirometra erinaceieuropaei SPER_0001708101 N 0.448
SPER_0001952401 Spirometra erinaceieuropaei SPER_0001952401 N 0.448
TC009856 Tribolium castaneum TC009856 N 0.652
TcIL3000.10.440 Trypanosoma congolense TcIL3000.10.440 N 0.544
TCNE_0000669501 Toxocara canis TCNE_0000669501 N 0.513
TRE_0000259001 Trichobilharzia regenti TRE_0000259001 N 0.455
TVAG_114290 Trichomonas vaginalis TVAG_114290 N 0.494
TVAG_390840 Trichomonas vaginalis TVAG_390840 N 0.534
UCREL1_237 Eutypa lata UCREL1_237 N 0.564
UCREL1_749 Eutypa lata UCREL1_749 N 0.425
VDBG_04936 Verticillium albo atrum VDBG_04936 N 0.494
VDBG_04936 Verticillium alfalfae VDBG_04936 N 0.494
WALSEDRAFT_59420 Wallemia sebi WALSEDRAFT_59420 N 0.504
sox-2 Caenorhabditis elegans WBGene00004949 I 0.513
WUBG_12101 Wuchereria bancrofti WUBG_12101 N 0.514
yakG000714 Bos grunniens yakG000714 N 0.482
YQE_03817 Dendroctonus ponderosae YQE_03817 N 0.648
YQE_08562 Dendroctonus ponderosae YQE_08562 N 0.598
YQE_13041 Dendroctonus ponderosae YQE_13041 N 0.565