mgf006113m (Mimulus guttatus)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 mgf006113m T334284_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HMG-1
M02720_2.00 		Pisum sativum
STYGTDHTY
RADHACRAS		 SELEX
Mathelier et al.(2014)
MA0044.1 		0.621 0.681
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
mgf006113m Sox 37 106

Links

Other Sox family TFs
Other Mimulus guttatus TFs

301 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MYB76 Arabidopsis lyrata Al_scaffold_0006_698 I
AMTR_s00038p00183620 Amborella trichopoda AMTR_s00038p00183620 I
MYB51 Arabidopsis thaliana AT1G18570 D
MYB122 Arabidopsis thaliana AT1G74080 I
MYB106 Arabidopsis thaliana AT3G01140 D
MYB29 Arabidopsis thaliana AT5G07690 I
MYB76 Arabidopsis thaliana AT5G07700 I
ATMYB16 Arabidopsis thaliana AT5G15310 I
MYB34 Arabidopsis thaliana AT5G60890 I
MYB28 Arabidopsis thaliana AT5G61420 I
BGIOSGA016547 Oryza indica BGIOSGA016547 I
BGIOSGA026935 Oryza indica BGIOSGA026935 I
Bo2g012520 Brassica oleracea Bo2g012520 I
Bo2g080900 Brassica oleracea Bo2g080900 I
Bo2g161180 Brassica oleracea Bo2g161180 I
Bo2g161590 Brassica oleracea Bo2g161590 I
Bo3g004500 Brassica oleracea Bo3g004500 I
Bo3g010230 Brassica oleracea Bo3g010230 I
Bo5g025570 Brassica oleracea Bo5g025570 I
Bo5g156410 Brassica oleracea Bo5g156410 I
Bo6g118350 Brassica oleracea Bo6g118350 I
Bo7g098110 Brassica oleracea Bo7g098110 I
Bo7g098590 Brassica oleracea Bo7g098590 I
Bo8g067910 Brassica oleracea Bo8g067910 I
Bo8g104300 Brassica oleracea Bo8g104300 I
Bo9g014380 Brassica oleracea Bo9g014380 I
Bo9g014610 Brassica oleracea Bo9g014610 I
Bo9g164230 Brassica oleracea Bo9g164230 I
Bo9g175680 Brassica oleracea Bo9g175680 I
Bostr.13129s0197 Boechera stricta Bostr.13129s0197 I
Bostr.26833s0098 Boechera stricta Bostr.26833s0098 I
Bostr.26833s0149 Boechera stricta Bostr.26833s0149 I
Bostr.2902s0269 Boechera stricta Bostr.2902s0269 I
Bostr.7128s0464 Boechera stricta Bostr.7128s0464 I
Bra005949 Brassica rapa Bra005949 I
Bra006296 Brassica rapa Bra006296 I
Bra008705 Brassica rapa Bra008705 I
Bra012961 Brassica rapa Bra012961 I
Bra013000 Brassica rapa Bra013000 I
Bra015939 Brassica rapa Bra015939 I
Bra016553 Brassica rapa Bra016553 I
Bra023515 Brassica rapa Bra023515 I
Bra025666 Brassica rapa Bra025666 I
Bra029311 Brassica rapa Bra029311 I
Bra031035 Brassica rapa Bra031035 I
Bra035929 Brassica rapa Bra035929 I
Bra035954 Brassica rapa Bra035954 I
Bra039142 Brassica rapa Bra039142 I
BRADI3G58770 Brachypodium distachyon BRADI3G58770 I
BRADI5G12417 Brachypodium distachyon BRADI5G12417 I
Cagra.0542s0036 Capsella grandiflora Cagra.0542s0036 I
Cagra.1036s0022 Capsella grandiflora Cagra.1036s0022 I
Cagra.1390s0010 Capsella grandiflora Cagra.1390s0010 I
Cagra.2925s0017 Capsella grandiflora Cagra.2925s0017 I
Cagra.4153s0023 Capsella grandiflora Cagra.4153s0023 I
Carubv10001328m.g Capsella rubella Carubv10001328m.g I
Carubv10001433m.g Capsella rubella Carubv10001433m.g I
Carubv10009563m.g Capsella rubella Carubv10009563m.g I
Carubv10013887m.g Capsella rubella Carubv10013887m.g I
Carubv10020723m.g Capsella rubella Carubv10020723m.g I
Carubv10027524m.g Capsella rubella Carubv10027524m.g I
Carubv10027861m.g Capsella rubella Carubv10027861m.g I
cassava1759.valid.m1 Manihot esculenta cassava1759.valid.m1 I
cassava360.valid.m1 Manihot esculenta cassava360.valid.m1 I
cassava40469.m1 Manihot esculenta cassava40469.m1 I
cassava44039.valid.m1 Manihot esculenta cassava44039.valid.m1 I
cassava46145.m1 Manihot esculenta cassava46145.m1 I
cassava46146.m1 Manihot esculenta cassava46146.m1 I
cassava47112.m1 Manihot esculenta cassava47112.m1 I
Ca_10504 Cicer arietinum Ca_10504 I
Ciclev10011948m.g Citrus clementina Ciclev10011948m.g I
Cla010483 Citrullus lanatus Cla010483 I
Cucsa.158170 Cucumis sativus Cucsa.158170 I
Eucgr.J01362 Eucalyptus grandis Eucgr.J01362 I
evm.TU.supercontig_14.102 Carica papaya evm.TU.supercontig_14.102 I
evm.TU.supercontig_3.239 Carica papaya evm.TU.supercontig_3.239 I
F775_26161 Aegilops tauschii F775_26161 I
MYB51 Arabidopsis lyrata fgenesh2_kg.1__2031__AT1G18570.1 I
ATMYB122 Arabidopsis lyrata fgenesh2_kg.2__1680__AT1G74080.1 I
MYB106 Arabidopsis lyrata fgenesh2_kg.3__117__AT3G01140.1 I
ATMYB16 Arabidopsis lyrata fgenesh2_kg.6__1513__AT5G15310.1 I
MYB29 Arabidopsis lyrata fgenesh2_kg.6__738__AT5G07690.1 I
ATMYB34 Arabidopsis lyrata fgenesh2_kg.8__2056__AT5G60890.1 I
gene04423-v1.0-hybrid Fragaria vesca gene04423-v1.0-hybrid I
gene12738-v1.0-hybrid Fragaria vesca gene12738-v1.0-hybrid I
GLYMA02G12266 Glycine max GLYMA02G12266 I
GLYMA06G21040 Glycine max GLYMA06G21040 I
GLYMA09G37040 Glycine max GLYMA09G37040 I
GLYMA13G05550 Glycine max GLYMA13G05550 I
GLYMA18G49630 Glycine max GLYMA18G49630 I
Gorai.003G097900 Gossypium raimondii Gorai.003G097900 I
Gorai.008G179600 Gossypium raimondii Gorai.008G179600 I
Gorai.011G122800 Gossypium raimondii Gorai.011G122800 I
Gorai.012G052500 Gossypium raimondii Gorai.012G052500 I
Gorai.012G186500 Gossypium raimondii Gorai.012G186500 I
Gorai.013G088300 Gossypium raimondii Gorai.013G088300 I
GRMZM2G032655 Zea mays GRMZM2G032655 I
GSMUA_Achr10G19130_001 Musa acuminata GSMUA_Achr10G19130_001 I
GSMUA_Achr10G29680_001 Musa acuminata GSMUA_Achr10G29680_001 I
GSMUA_Achr5G23240_001 Musa acuminata GSMUA_Achr5G23240_001 I
GSMUA_Achr6G02550_001 Musa acuminata GSMUA_Achr6G02550_001 I
GSMUA_Achr7G18410_001 Musa acuminata GSMUA_Achr7G18410_001 I
LjSGA_020545.1 Lotus japonicus LjSGA_020545.1 I
LPERR08G12960 Leersia perrieri LPERR08G12960 I
Lus10016855.g Linum usitatissimum Lus10016855.g I
Lus10019085.g Linum usitatissimum Lus10019085.g I
Lus10026620.g Linum usitatissimum Lus10026620.g I
Lus10033003.g Linum usitatissimum Lus10033003.g I
MDP0000121476 Malus domestica MDP0000121476 I
MDP0000274301 Malus domestica MDP0000274301 I
MDP0000278681 Malus domestica MDP0000278681 I
MDP0000742771 Malus domestica MDP0000742771 I
MTR_4g082290 Medicago truncatula MTR_4g082290 I
OB02G39890 Oryza brachyantha OB02G39890 I
OB04G22310 Oryza brachyantha OB04G22310 I
OB08G23170 Oryza brachyantha OB08G23170 I
OBART04G14990 Oryza barthii OBART04G14990 I
OBART08G15700 Oryza barthii OBART08G15700 I
OGLUM08G16450 Oryza glumaepatula OGLUM08G16450 I
OLONG_004507 Oryza longistaminata OLONG_004507 I
OMERI08G12990 Oryza meridionalis OMERI08G12990 I
ONIVA04G13130 Oryza nivara ONIVA04G13130 I
ONIVA08G16810 Oryza nivara ONIVA08G16810 I
OPUNC03G13890 Oryza punctata OPUNC03G13890 I
OPUNC08G13770 Oryza punctata OPUNC08G13770 I
orange1.1g016708m.g Citrus sinensis orange1.1g016708m.g I
ORGLA04G0119800 Oryza glaberrima ORGLA04G0119800 I
ORGLA08G0137800 Oryza glaberrima ORGLA08G0137800 I
ORUFI04G16390 Oryza rufipogon ORUFI04G16390 I
ORUFI08G17610 Oryza rufipogon ORUFI08G17610 I
OS04G0461000 Oryza sativa OS04G0461000 I
Pavir.Fa00877 Panicum virgatum Pavir.Fa00877 I
Pavir.J33881 Panicum virgatum Pavir.J33881 I
PGSC0003DMG400001339 Solanum tuberosum PGSC0003DMG400001339 I
PGSC0003DMG400011243 Solanum tuberosum PGSC0003DMG400011243 I
PGSC0003DMG400024299 Solanum tuberosum PGSC0003DMG400024299 I
PK01174.1 Cannabis sativa PK01174.1 I
PK14811.1 Cannabis sativa PK14811.1 I
PK16958.1 Cannabis sativa PK16958.1 I
PK22137.1 Cannabis sativa PK22137.1 I
PK27708.1 Cannabis sativa PK27708.1 I
Pm008294 Prunus mume Pm008294 I
Pm015916 Prunus mume Pm015916 I
POPTR_0017s12230 Populus trichocarpa POPTR_0017s12230 I
PRUPE_ppa006769mg Prunus persica PRUPE_ppa006769mg I
PRUPE_ppa007594mg Prunus persica PRUPE_ppa007594mg I
SapurV1A.0438s0010 Salix purpurea SapurV1A.0438s0010 I
MYB28 Arabidopsis lyrata scaffold_802785.1 I
Si010352m.g Setaria italica Si010352m.g I
Si013994m.g Setaria italica Si013994m.g I
Solyc01g010910.1 Solanum lycopersicum Solyc01g010910.1 I
Solyc10g005550.1 Solanum lycopersicum Solyc10g005550.1 I
TCM_011659 Theobroma cacao TCM_011659 I
TCM_018639 Theobroma cacao TCM_018639 I
Thhalv10004407m.g Eutrema salsugineum Thhalv10004407m.g I
Thhalv10004638m.g Eutrema salsugineum Thhalv10004638m.g I
Thhalv10008152m.g Eutrema salsugineum Thhalv10008152m.g I
Thhalv10013952m.g Eutrema salsugineum Thhalv10013952m.g I
Thhalv10014101m.g Eutrema salsugineum Thhalv10014101m.g I
Traes_2DL_C964675DE Triticum aestivum Traes_2DL_C964675DE I
Traes_6AL_52227091B Triticum aestivum Traes_6AL_52227091B I
TRIUR3_23397 Triticum urartu TRIUR3_23397 I
TRIUR3_25784 Triticum urartu TRIUR3_25784 I
VIT_14s0108g01080 Vitis vinifera VIT_14s0108g01080 I