mgf015439m (Mimulus guttatus)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 mgf015439m T334297_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HMGB13
M07268_2.00 		Arabidopsis thaliana
HNHYNBNNNHDYCDCCGCCRB
VYGGCGGHGRHDNNNVNRDND		 Dap-seq
OMalley et al.(2016)
3XHMGBOX1_col_a 		0.506 0.670
HMGB13
M07269_2.00 		Arabidopsis thaliana
GGHGGHGGYGGHGGN
NCCDCCRCCDCCDCC		 Dap-seq
OMalley et al.(2016)
3XHMGBOX1_colamp_a 		0.506 0.670
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
mgf015439m Sox 179 245
mgf015439m Sox 296 362
mgf015439m Sox 423 491

Links

Other Sox family TFs
Other Mimulus guttatus TFs

61 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
67303 Aureococcus anophagefferens 67303 N
A1O9_05704 Exophiala aquamarina A1O9_05704 N
AAEL000771 Aedes aegypti AAEL000771 N
AALB009772 Anopheles albimanus AALB009772 N
AALB009867 Anopheles albimanus AALB009867 N
AARA000825 Anopheles arabiensis AARA000825 N
AATE015714 Anopheles atroparvus AATE015714 N
AATE016483 Anopheles atroparvus AATE016483 N
ACEP10857 Atta cephalotes ACEP10857 N
ACEP25851 Atta cephalotes ACEP25851 N
ACHR008996 Anopheles christyi ACHR008996 N
ACOM022799 Anopheles coluzzii ACOM022799 N
ACOM026653 Anopheles coluzzii ACOM026653 N
ACOM029353 Anopheles coluzzii ACOM029353 I
ACUA008827 Anopheles culicifacies ACUA008827 N
ACUA010594 Anopheles culicifacies ACUA010594 N
ACUA012732 Anopheles culicifacies ACUA012732 N
ADIR005631 Anopheles dirus ADIR005631 N
ADIR009661 Anopheles dirus ADIR009661 N
AEPI003629 Anopheles epiroticus AEPI003629 N
AEPI007652 Anopheles epiroticus AEPI007652 N
AEPI007948 Anopheles epiroticus AEPI007948 N
Afo_R012388 Aptenodytes forsteri Afo_R012388 N
Afo_R012670 Aptenodytes forsteri Afo_R012670 N
AFUN006689 Anopheles funestus AFUN006689 N
AFUN009317 Anopheles funestus AFUN009317 N
AFUN010198 Anopheles funestus AFUN010198 N
AGAP028091 Anopheles gambiae AGAP028091 N
Alligator_sinensis_CCG005706.1 Alligator sinensis Alligator_sinensis_CCG005706.1 I
ALUE_0000245701 Ascaris lumbricoides ALUE_0000245701 N
ALUE_0000639901 Ascaris lumbricoides ALUE_0000639901 N
AMAM004028 Anopheles maculatus AMAM004028 N
AMAM023617 Anopheles maculatus AMAM023617 N
AMEC000538 Anopheles melas AMEC000538 I
AMEC007393 Anopheles melas AMEC007393 N
AMEC011653 Anopheles melas AMEC011653 N
AMEM002834 Anopheles merus AMEM002834 N
AMEM007694 Anopheles merus AMEM007694 N
AMIN001220 Anopheles minimus AMIN001220 N
AMIN009302 Anopheles minimus AMIN009302 N
ANCDUO_13942 Ancylostoma duodenale ANCDUO_13942 N
AOL_s00081g337 Arthrobotrys oligospora AOL_s00081g337 N
AQUA001261 Anopheles quadriannulatus AQUA001261 N
AQUA005880 Anopheles quadriannulatus AQUA005880 N
ASIS001889 Anopheles sinensis ASIS001889 N
ASTEI06131 Anopheles stephensi ASTEI06131 N
ASTEI06408 Anopheles stephensi ASTEI06408 N
AWRI1499_3370 Brettanomyces bruxellensis AWRI1499_3370 N
BGIBMGA003081 Bombyx mori BGIBMGA003081 N
BGLB010902 Biomphalaria glabrata BGLB010902 N
BN7_5034 Wickerhamomyces ciferrii BN7_5034 N
BOTBODRAFT_575781 Botryobasidium botryosum BOTBODRAFT_575781 N
Brh_R004116 Buceros rhinoceros Brh_R004116 N
Brh_R008736 Buceros rhinoceros Brh_R008736 I
CAA46605 Xenopus laevis CAA46605 N
CAA46607 Xenopus laevis CAA46607 N
CaO19.1731 Candida albicans CaO19.1731 N
CaO19.9299 Candida albicans CaO19.9299 N
Ca_14341 Cicer arietinum Ca_14341 N
CC1G_07924 Coprinopsis cinerea CC1G_07924 N
CFIO01_04514 Colletotrichum fioriniae CFIO01_04514 N
CLEC006960 Cimex lectularius CLEC006960 N
Cmyd_10006594 Chelonia mydas Cmyd_10006594 N
CNM02020 Cryptococcus neoformans CNM02020 N
CPIJ012041 Culex quinquefasciatus CPIJ012041 N
CPIJ012498 Culex quinquefasciatus CPIJ012498 N
CPIJ014017 Culex quinquefasciatus CPIJ014017 N
CpipJ_CPIJ012041 Culex pipiens CpipJ_CPIJ012041 N
CpipJ_CPIJ012498 Culex pipiens CpipJ_CPIJ012498 N
CpipJ_CPIJ014017 Culex pipiens CpipJ_CPIJ014017 N
csin108932 Clonorchis sinensis csin108932 I
D915_01276 Fasciola hepatica D915_01276 N
D918_08317 Trichuris suis D918_08317 N
DAPPUDRAFT_113704 Daphnia pulex DAPPUDRAFT_113704 N
DRE_00029 Drechslerella stenobrocha DRE_00029 N
ECPE_0001194001 Echinostoma caproni ECPE_0001194001 N
EFA85451.1 Polysphondylium pallidum EFA85451.1 N
ENSAMXG00000003325 Astyanax mexicanus ENSAMXG00000003325 N
ENSAMXG00000017231 Astyanax mexicanus ENSAMXG00000017231 I
ENSAPLG00000003216 Anas platyrhynchos ENSAPLG00000003216 N
ENSAPLG00000010204 Anas platyrhynchos ENSAPLG00000010204 N
ENSAPLG00000013168 Anas platyrhynchos ENSAPLG00000013168 I
ENSBTAP00000027633-D1 Bos grunniens ENSBTAP00000027633-D1 I
SOX8 Callithrix jacchus ENSCJAG00000002684 I
SOX18 Callithrix jacchus ENSCJAG00000022379 N
ENSCSAG00000016751 Chlorocebus sabaeus ENSCSAG00000016751 N
SOX18 Dasypus novemcinctus ENSDNOG00000036237 N
SOX12 Dasypus novemcinctus ENSDNOG00000044763 N
SOX8 Equus caballus ENSECAG00000016320 I
SOX10 Echinops telfairi ENSETEG00000012633 I
SOX8 Echinops telfairi ENSETEG00000015470 N
SOX9 Echinops telfairi ENSETEG00000020237 I
SOX8 Felis catus ENSFCAG00000004219 N
ENSFCAG00000015685 Felis catus ENSFCAG00000015685 I
SOX2 Felis catus ENSFCAG00000029205 I
ENSLOCG00000011834 Lepisosteus oculatus ENSLOCG00000011834 I
ENSMGAG00000006624 Meleagris gallopavo ENSMGAG00000006624 N
SOX8 Microcebus murinus ENSMICG00000011516 I
SOX9 Myotis lucifugus ENSMLUG00000030312 I
Hmg20b Mus musculus ENSMUSG00000020232 D
Sox17 Mus musculus ENSMUSG00000025902 D
ENSOANG00000002448 Ornithorhynchus anatinus ENSOANG00000002448 I
ENSOANG00000011188 Ornithorhynchus anatinus ENSOANG00000011188 I
ENSOARG00000000906 Ovis aries ENSOARG00000000906 I
ENSP00000322568 Macaca fascicularis ENSP00000322568 I
ENSP00000409273 Macaca fascicularis ENSP00000409273 I
ENSPANG00000005859 Papio anubis ENSPANG00000005859 I
SOX2 Procavia capensis ENSPCAG00000003690 I
SOX18 Procavia capensis ENSPCAG00000015663 N
SOX18 Pan troglodytes ENSPTRG00000030459 I
SOX17 Sorex araneus ENSSARG00000009573 I
ENSSHAG00000008406 Sarcophilus harrisii ENSSHAG00000008406 I
ENSSTOG00000011011 Ictidomys tridecemlineatus ENSSTOG00000011011 I
SOX9 Tupaia belangeri ENSTBEG00000000175 N
sox9a Tetraodon nigroviridis ENSTNIG00000001901 N
ENSTSYG00000001164 Tarsius syrichta ENSTSYG00000001164 I
ENSTSYG00000006321 Tarsius syrichta ENSTSYG00000006321 I
ENSTTRG00000015548 Tursiops truncatus ENSTTRG00000015548 I
e_gw.60.194.1 Branchiostoma floridae e_gw.60.194.1 N
GL15054 Drosophila persimilis FBgn0152658 N
GD17533 Drosophila simulans FBgn0189083 N
fgenesh1_pg.C_scaffold_11000031 Sporobolomyces roseus fgenesh1_pg.C_scaffold_11000031 N
fgenesh1_pg.sca_3_chr4_2_0000426 Nectria haematococca fgenesh1_pg.sca_3_chr4_2_0000426 N
GB40963 Apis mellifera GB40963 N
Gfo_R006305 Geospiza fortis Gfo_R006305 I
GLOINDRAFT_25375 Rhizophagus irregularis GLOINDRAFT_25375 N
GLOINDRAFT_271935 Rhizophagus irregularis GLOINDRAFT_271935 N
GLOINDRAFT_31865 Rhizophagus irregularis GLOINDRAFT_31865 N
GLOINDRAFT_323774 Rhizophagus irregularis GLOINDRAFT_323774 N
GLOINDRAFT_346686 Rhizophagus irregularis GLOINDRAFT_346686 N
GLOINDRAFT_83691 Rhizophagus irregularis GLOINDRAFT_83691 N
GLOTRDRAFT_8101 Gloeophyllum trabeum GLOTRDRAFT_8101 N
GLYMA20G01570 Glycine max GLYMA20G01570 N
GPLIN_000596700 Globodera pallida GPLIN_000596700 I
GPLIN_000970900 Globodera pallida GPLIN_000970900 N
GPLIN_001405800 Globodera pallida GPLIN_001405800 I
GPUH_0000499601 Gongylonema pulchrum GPUH_0000499601 N
gw.110.115.1 Branchiostoma floridae gw.110.115.1 N
GYMLUDRAFT_143012 Gymnopus luxurians GYMLUDRAFT_143012 N
H072_9933 Dactylellina haptotyla H072_9933 N
Hba_21281 Heterorhabditis bacteriophora Hba_21281 N
HHAL000218-PA Halyomorpha halys HHAL000218-PA N
HHAL001293-PA Halyomorpha halys HHAL001293-PA N
HHAL001583-PA Halyomorpha halys HHAL001583-PA N
HMEL002398 Heliconius melpomene HMEL002398 I
HMEL006651 Heliconius melpomene HMEL006651 I
HMEL013676 Heliconius melpomene HMEL013676 N
Hsal_04827--XP_001122993.1_APIME Harpegnathos saltator Hsal_04827--XP_001122993.1_APIME N
Hsal_05005--XP_001122373.1_APIME Harpegnathos saltator Hsal_05005--XP_001122373.1_APIME N
HYDPIDRAFT_51400 Hydnomerulius pinastri HYDPIDRAFT_51400 N
ISCW001638 Ixodes scapularis ISCW001638 N
K443DRAFT_58201 Laccaria amethystina K443DRAFT_58201 N
L798_00185 Zootermopsis nevadensis L798_00185 N
L798_05432 Zootermopsis nevadensis L798_05432 N
L798_12046 Zootermopsis nevadensis L798_12046 N
L798_12049 Zootermopsis nevadensis L798_12049 I
L898_g4879 Steinernema monticolum L898_g4879 N
LACBIDRAFT_169971 Laccaria bicolor LACBIDRAFT_169971 N
LCUP001586 Lucilia cuprina LCUP001586 N
LDEC017494 Leptinotarsa decemlineata LDEC017494 N
LDEC018263 Leptinotarsa decemlineata LDEC018263 N
LDEC019307 Leptinotarsa decemlineata LDEC019307 N
LotgiG143673 Lottia gigantea LotgiG143673 N
M404DRAFT_787968 Pisolithus tinctorius M404DRAFT_787968 N
maker-nMf.1.1.scaf00287-augustus-gene-0.13 Meloidogyne floridensis maker-nMf.1.1.scaf00287-augustus-gene-0.13 I
MCINX010139 Melitaea cinxia MCINX010139 N
MCOS_0000919201 Mesocestoides corti MCOS_0000919201 N
MESCA006188 Megaselia scalaris MESCA006188 N
MESCA006364 Megaselia scalaris MESCA006364 N
MPER_06248 Moniliophthora perniciosa MPER_06248 N
MTR_6g048860 Medicago truncatula MTR_6g048860 N
Myotis_brandtii_Hmgb2_10029741 Myotis brandtii Myotis_brandtii_Hmgb2_10029741 N
Myotis_brandtii_SOX2_10019709 Myotis brandtii Myotis_brandtii_SOX2_10019709 I
NechaG79025 Fusarium solani NechaG79025 N
OESDEN_19415 Oesophagostomum dentatum OESDEN_19415 N
Ogr00751 Ophisaurus gracilis Ogr00751 I
Ogr08337 Ophisaurus gracilis Ogr08337 N
Ogr11176 Ophisaurus gracilis Ogr11176 N
PDIP_33190 Penicillium digitatum PDIP_33190 N
PEQ_0000549401 Parascaris equorum PEQ_0000549401 N
PEX1_064750 Penicillium expansum PEX1_064750 N
PFICI_02946 Pestalotiopsis fici PFICI_02946 N
PHUM433280 Pediculus humanus PHUM433280 N
PLEOSDRAFT_1017219 Pleurotus ostreatus PLEOSDRAFT_1017219 N
PLICRDRAFT_78649 Plicaturopsis crispa PLICRDRAFT_78649 N
POSPLDRAFT_103238 Postia placenta POSPLDRAFT_103238 N
POSPLDRAFT_104634 Postia placenta POSPLDRAFT_104634 N
PPAI003639 Phlebotomus papatasi PPAI003639 N
PPAI005428 Phlebotomus papatasi PPAI005428 N
PredSwiss_ASS2010_3779.1 Pneumocystis carinii PredSwiss_ASS2010_3779.1 N
PredSwiss_ASS2010_4422.1 Pneumocystis carinii PredSwiss_ASS2010_4422.1 N
PredSwiss_CON1835.1 Pneumocystis carinii PredSwiss_CON1835.1 N
PSEUBRA_SCAF2g02551 Pseudozyma brasiliensis PSEUBRA_SCAF2g02551 N
PTTG_00444 Puccinia triticina PTTG_00444 N
PXEA_0000763901 Protopolystoma xenopodis PXEA_0000763901 N
PXEA_0002992801 Protopolystoma xenopodis PXEA_0002992801 N
RPRC001038 Rhodnius prolixus RPRC001038 N
RPRC013413 Rhodnius prolixus RPRC013413 N
SCLCIDRAFT_59496 Scleroderma citrinum SCLCIDRAFT_59496 N
SCUD_0001126301 Schistosoma curassoni SCUD_0001126301 N
SERLA73DRAFT_139986 Serpula lacrymans SERLA73DRAFT_139986 N
SINV16572 Solenopsis invicta SINV16572 N
SINV19749 Solenopsis invicta SINV19749 N
SINV24165 Solenopsis invicta SINV24165 N
Sjc_0107520 Schistosoma japonicum Sjc_0107520 N
SMAR007058 Strigamia maritima SMAR007058 N
SMAR010125 Strigamia maritima SMAR010125 N
SMRZ_0002061501 Schistosoma margrebowiei SMRZ_0002061501 N
SMTD_0001685201 Schistosoma mattheei SMTD_0001685201 N
SMU15030186 Schmidtea mediterranea SMU15030186 N
SPER_0001708101 Spirometra erinaceieuropaei SPER_0001708101 N
SPER_0001952401 Spirometra erinaceieuropaei SPER_0001952401 N
T265_14506 Opisthorchis viverrini T265_14506 I
TC009856 Tribolium castaneum TC009856 N
TCNE_0000669501 Toxocara canis TCNE_0000669501 N
TELCIR_00631 Teladorsagia circumcincta TELCIR_00631 I
Thaps7519 Thalassiosira pseudonana Thaps7519 N
TRE_0000259001 Trichobilharzia regenti TRE_0000259001 N
TTAC_0001064401 Hydatigera taeniaeformis TTAC_0001064401 N
TVAG_390840 Trichomonas vaginalis TVAG_390840 N
UCREL1_237 Eutypa lata UCREL1_237 N
UCREL1_469 Eutypa lata UCREL1_469 N
UCREL1_749 Eutypa lata UCREL1_749 N
WALSEDRAFT_27096 Wallemia sebi WALSEDRAFT_27096 N
WALSEDRAFT_59420 Wallemia sebi WALSEDRAFT_59420 N
sox-2 Caenorhabditis elegans WBGene00004949 I
WUBG_10398 Wuchereria bancrofti WUBG_10398 N
sox13.S Xenopus laevis XB-GENE-865496 I
sox5.S Xenopus laevis XB-GENE-865667 I
XP_002170844.1 Hydra magnipapillata XP_002170844.1 I
XP_002935940 Xenopus tropicalis XP_002935940 N
yakG000714 Bos grunniens yakG000714 N
YQE_03817 Dendroctonus ponderosae YQE_03817 N
YQE_08562 Dendroctonus ponderosae YQE_08562 N
YQE_13041 Dendroctonus ponderosae YQE_13041 N