SNAPOd2T00000181001 (Oikopleura dioica)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 SNAPOd2T00000181001 T335040_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
SNAPOd2T00000181001 Sox 11 80

Links

Other Sox family TFs
Other Oikopleura dioica TFs

97 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL011425 Aedes aegypti AAEL011425 I 0.423
ACHR003271 Anopheles christyi ACHR003271 I 0.416
AMAG_00757 Allomyces macrogynus AMAG_00757 N 0.451
AMAG_02260 Allomyces macrogynus AMAG_02260 N 0.451
AMTR_s00046p00227790 Amborella trichopoda AMTR_s00046p00227790 N 0.419
AMTR_s00171p00070550 Amborella trichopoda AMTR_s00171p00070550 I 0.461
BGIOSGA027814 Oryza indica BGIOSGA027814 I 0.482
BGIOSGA027819 Oryza indica BGIOSGA027819 I 0.482
Bo2g160920 Brassica oleracea Bo2g160920 I 0.476
Bo9g014140 Brassica oleracea Bo9g014140 I 0.469
Bostr.10199s0131 Boechera stricta Bostr.10199s0131 N 0.470
Bra026498 Brassica rapa Bra026498 I 0.470
Bra029371 Brassica rapa Bra029371 I 0.476
BXY_1081800 Bursaphelenchus xylophilus BXY_1081800 I 0.423
BXY_1081900 Bursaphelenchus xylophilus BXY_1081900 I 0.440
Cagra.0086s0060 Capsella grandiflora Cagra.0086s0060 I 0.470
Carubv10001858m.g Capsella rubella Carubv10001858m.g I 0.470
cassava23716.valid.m1 Manihot esculenta cassava23716.valid.m1 I 0.424
Ca_05351 Cicer arietinum Ca_05351 I 0.432
Cflo_11824--XP_001120264.1_APIME Camponotus floridanus Cflo_11824--XP_001120264.1_APIME N 0.417
Ciclev10016587m.g Citrus clementina Ciclev10016587m.g N 0.509
Cla009222 Citrullus lanatus Cla009222 I 0.470
CPIJ002953 Culex quinquefasciatus CPIJ002953 N 0.432
CPIJ020011 Culex quinquefasciatus CPIJ020011 I 0.462
CpipJ_CPIJ002953 Culex pipiens CpipJ_CPIJ002953 N 0.432
CpipJ_CPIJ020011 Culex pipiens CpipJ_CPIJ020011 I 0.462
Cucsa.300030 Cucumis sativus Cucsa.300030 I 0.470
ENSCAFG00000016282 Canis familiaris ENSCAFG00000016282 I 0.419
ENSCJAG00000005187 Callithrix jacchus ENSCJAG00000005187 I 0.429
ENSMMUG00000031258 Macaca mulatta ENSMMUG00000031258 I 0.438
ENSOGAG00000026034 Otolemur garnettii ENSOGAG00000026034 I 0.520
ENSOGAG00000031524 Otolemur garnettii ENSOGAG00000031524 I 0.469
HMGB2 Ochotona princeps ENSOPRG00000010124 I 0.456
AABR07009373.1 Rattus norvegicus ENSRNOG00000011429 I 0.437
ETH_00031100 Eimeria tenella ETH_00031100 I 0.417
Eucgr.J00336 Eucalyptus grandis Eucgr.J00336 I 0.442
evm.TU.supercontig_247.1 Carica papaya evm.TU.supercontig_247.1 N 0.453
F775_29723 Aegilops tauschii F775_29723 I 0.416
Ssrp Drosophila melanogaster FBgn0010278 N 0.450
Ssrp Drosophila pseudoobscura FBgn0078456 N 0.418
GF12460 Drosophila ananassae FBgn0089497 N 0.458
GG19998 Drosophila erecta FBgn0112197 N 0.450
GH21151 Drosophila grimshawi FBgn0128613 N 0.457
GI18750 Drosophila mojavensis FBgn0141489 N 0.425
GL11071 Drosophila persimilis FBgn0148681 N 0.418
GD25013 Drosophila simulans FBgn0196325 N 0.450
GJ21774 Drosophila virilis FBgn0208892 N 0.450
GK22092 Drosophila willistoni FBgn0224077 N 0.421
GE11532 Drosophila yakuba FBgn0229332 N 0.450
GLYMA10G43440 Glycine max GLYMA10G43440 I 0.432
GLYMA20G23370 Glycine max GLYMA20G23370 I 0.432
Gorai.008G147700 Gossypium raimondii Gorai.008G147700 I 0.509
GRMZM2G125648 Zea mays GRMZM2G125648 N 0.428
GSMUA_AchrUn_randomG05290_001 Musa acuminata GSMUA_AchrUn_randomG05290_001 I 0.424
HCOI01912600 Haemonchus contortus HCOI01912600 I 0.421
HCOI01913300 Haemonchus contortus HCOI01913300 I 0.421
HDID_0000239001 Hymenolepis diminuta HDID_0000239001 N 0.472
Hsal_00538--XP_001120264.1_APIME Harpegnathos saltator Hsal_00538--XP_001120264.1_APIME N 0.417
L798_13679 Zootermopsis nevadensis L798_13679 N 0.417
LDEC020995 Leptinotarsa decemlineata LDEC020995 N 0.439
MDOA007633 Musca domestica MDOA007633 N 0.450
MDP0000205665 Malus domestica MDP0000205665 I 0.500
MLOC_27773 Hordeum vulgare MLOC_27773 I 0.416
OB08G10120 Oryza brachyantha OB08G10120 N 0.463
OBART08G00070 Oryza barthii OBART08G00070 I 0.482
OGLUM08G00090 Oryza glumaepatula OGLUM08G00090 I 0.482
OLONG_014445 Oryza longistaminata OLONG_014445 I 0.482
ONIVA08G00070 Oryza nivara ONIVA08G00070 I 0.482
OPUNC08G00150 Oryza punctata OPUNC08G00150 I 0.482
orange1.1g026850m.g Citrus sinensis orange1.1g026850m.g N 0.509
ORUFI08G00080 Oryza rufipogon ORUFI08G00080 I 0.482
OS08G0101100 Oryza sativa OS08G0101100 I 0.482
OSTLU_18991 Ostreococcus lucimarinus OSTLU_18991 N 0.419
Pavir.J10680 Panicum virgatum Pavir.J10680 N 0.425
PDK_20s1355261g001 Phoenix dactylifera PDK_20s1355261g001 N 0.464
PDK_20s1709771g002 Phoenix dactylifera PDK_20s1709771g002 N 0.442
PGSC0003DMG400025304 Solanum tuberosum PGSC0003DMG400025304 I 0.452
Pm006054 Prunus mume Pm006054 I 0.500
HMGB6 Populus trichocarpa POPTR_0007s15320 I 0.462
PPA14042 Pristionchus pacificus PPA14042 N 0.427
PPAI002521 Phlebotomus papatasi PPAI002521 N 0.475
PRUPE_ppa026912mg Prunus persica PRUPE_ppa026912mg I 0.500
SapurV1A.0766s0120 Salix purpurea SapurV1A.0766s0120 I 0.500
Sb07g000230 Sorghum bicolor Sb07g000230 N 0.428
Si014434m.g Setaria italica Si014434m.g N 0.428
SPU_023988 Strongylocentrotus purpuratus SPU_023988 N 0.420
SSLN_0000125101 Schistocephalus solidus SSLN_0000125101 N 0.453
TASK_0000475801 Taenia asiatica TASK_0000475801 N 0.432
TCM_007659 Theobroma cacao TCM_007659 I 0.500
tetur02g08250 Tetranychus urticae tetur02g08250 N 0.417
Thhalv10004817m.g Eutrema salsugineum Thhalv10004817m.g N 0.444
Traes_1AS_3FCB35E65 Triticum aestivum Traes_1AS_3FCB35E65 I 0.416
Traes_1BS_15F9D276D Triticum aestivum Traes_1BS_15F9D276D I 0.416
Traes_1DS_C7F1E9F38 Triticum aestivum Traes_1DS_C7F1E9F38 I 0.416
TsM_000111500 Taenia solium TsM_000111500 N 0.432
TTAC_0000692101 Hydatigera taeniaeformis TTAC_0000692101 N 0.432
HMGB6 Vitis vinifera VIT_10s0071g00870 I 0.550