CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Solyc05g050330.2
(
Solanum lycopersicum
)
WRKY
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03106 (WRKY)
IPR003657
Solyc05g050330.2
T354785_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
WRKY70
M07399_2.00
Arabidopsis thaliana
HAAAGTCAACGNN
NNCGTTGACTTTD
Dap-seq
OMalley et al.(2016)
WRKY70_col
0.812
0.534
For this family, TFs with SR scores >
0.808
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Solyc05g050330.2.1
WRKY
128
185
KDGLNWRKYGQKLILGAKYPREYFQCVYCHCDATKMVQQIEKEPLSFEATYGGSHSCG
Links
Other
WRKY
family TFs
Other
Solanum lycopersicum
TFs
119 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
29708.m000185
Ricinus communis
29708.m000185
I
30169.m006395
Ricinus communis
30169.m006395
I
AMTR_s00022p00216890
Amborella trichopoda
AMTR_s00022p00216890
I
AMTR_s00119p00117410
Amborella trichopoda
AMTR_s00119p00117410
I
Aquca_014_00938
Aquilegia coerulea
Aquca_014_00938
I
EIL1
Arabidopsis thaliana
AT2G27050
D
EIN3
Arabidopsis thaliana
AT3G20770
D
BGIOSGA012535
Oryza indica
BGIOSGA012535
I
BGIOSGA023694
Oryza indica
BGIOSGA023694
I
Bo1g108650
Brassica oleracea
Bo1g108650
I
Bo3g041690
Brassica oleracea
Bo3g041690
I
Bo3g076180
Brassica oleracea
Bo3g076180
I
Bo5g106280
Brassica oleracea
Bo5g106280
I
Bostr.19424s0573
Boechera stricta
Bostr.19424s0573
I
Bostr.29505s0037
Boechera stricta
Bostr.29505s0037
I
Bra000528
Brassica rapa
Bra000528
I
Bra001802
Brassica rapa
Bra001802
I
BRADI1G63780
Brachypodium distachyon
BRADI1G63780
I
Cagra.2243s0007
Capsella grandiflora
Cagra.2243s0007
I
Cagra.6016s0001
Capsella grandiflora
Cagra.6016s0001
I
Carubv10013213m.g
Capsella rubella
Carubv10013213m.g
I
Carubv10022879m.g
Capsella rubella
Carubv10022879m.g
I
cassava3620.m1
Manihot esculenta
cassava3620.m1
I
Ca_07534
Cicer arietinum
Ca_07534
I
Ca_10236
Cicer arietinum
Ca_10236
I
chr2.CM0031.190.nc
Lotus japonicus
chr2.CM0031.190.nc
I
chr3.LjB09K03.50.nc
Lotus japonicus
chr3.LjB09K03.50.nc
I
Ciclev10000608m.g
Citrus clementina
Ciclev10000608m.g
I
Ciclev10000617m.g
Citrus clementina
Ciclev10000617m.g
I
Ciclev10014617m.g
Citrus clementina
Ciclev10014617m.g
I
Ciclev10015261m.g
Citrus clementina
Ciclev10015261m.g
I
Cucsa.142750
Cucumis sativus
Cucsa.142750
I
Cucsa.143220
Cucumis sativus
Cucsa.143220
I
Cucsa.364340
Cucumis sativus
Cucsa.364340
I
Eucgr.B03664
Eucalyptus grandis
Eucgr.B03664
I
Eucgr.G02632
Eucalyptus grandis
Eucgr.G02632
I
Eucgr.J00631
Eucalyptus grandis
Eucgr.J00631
I
evm.TU.supercontig_103.60
Carica papaya
evm.TU.supercontig_103.60
I
evm.TU.supercontig_54.30
Carica papaya
evm.TU.supercontig_54.30
I
e_gw1.11.194.1
Physcomitrella patens
e_gw1.11.194.1
I
e_gw1.87.73.1
Physcomitrella patens
e_gw1.87.73.1
D
F775_28545
Aegilops tauschii
F775_28545
I
EIN3
Arabidopsis lyrata
fgenesh2_kg.3__2304__AT3G20770.1
I
EIL1
Arabidopsis lyrata
fgenesh2_kg.4__646__AT2G27050.1
I
gene00379-v1.0-hybrid
Fragaria vesca
gene00379-v1.0-hybrid
I
gene20650-v1.0-hybrid
Fragaria vesca
gene20650-v1.0-hybrid
I
gene25474-v1.0-hybrid
Fragaria vesca
gene25474-v1.0-hybrid
I
GLYMA02G44220
Glycine max
GLYMA02G44220
I
GLYMA13G03660
Glycine max
GLYMA13G03660
I
GLYMA13G03700
Glycine max
GLYMA13G03700
I
GLYMA13G41751
Glycine max
GLYMA13G41751
I
GLYMA14G04550
Glycine max
GLYMA14G04550
I
GLYMA15G03650
Glycine max
GLYMA15G03650
I
GLYMA20G12250
Glycine max
GLYMA20G12250
I
Gorai.003G140600
Gossypium raimondii
Gorai.003G140600
I
Gorai.004G227800
Gossypium raimondii
Gorai.004G227800
I
Gorai.009G105400
Gossypium raimondii
Gorai.009G105400
I
Gorai.013G266300
Gossypium raimondii
Gorai.013G266300
I
GRMZM2G003558
Zea mays
GRMZM2G003558
I
GRMZM2G033570
Zea mays
GRMZM2G033570
I
GRMZM2G151811
Zea mays
GRMZM2G151811
I
GRMZM2G317584
Zea mays
GRMZM2G317584
I
GSMUA_Achr10G12800_001
Musa acuminata
GSMUA_Achr10G12800_001
I
GSMUA_Achr11G25120_001
Musa acuminata
GSMUA_Achr11G25120_001
I
GSMUA_Achr2G11540_001
Musa acuminata
GSMUA_Achr2G11540_001
I
GSMUA_Achr3G09440_001
Musa acuminata
GSMUA_Achr3G09440_001
I
GSMUA_Achr5G27670_001
Musa acuminata
GSMUA_Achr5G27670_001
I
GSMUA_Achr6G15930_001
Musa acuminata
GSMUA_Achr6G15930_001
I
GSMUA_Achr8G21550_001
Musa acuminata
GSMUA_Achr8G21550_001
I
GSMUA_Achr9G17080_001
Musa acuminata
GSMUA_Achr9G17080_001
I
LPERR03G13760
Leersia perrieri
LPERR03G13760
I
LPERR07G23570
Leersia perrieri
LPERR07G23570
I
MDP0000202831
Malus domestica
MDP0000202831
I
MDP0000212881
Malus domestica
MDP0000212881
I
MDP0000306498
Malus domestica
MDP0000306498
I
MDP0000564884
Malus domestica
MDP0000564884
I
mgf012394m
Mimulus guttatus
mgf012394m
I
mgf015996m
Mimulus guttatus
mgf015996m
I
mgf018950m
Mimulus guttatus
mgf018950m
I
MLOC_14619
Hordeum vulgare
MLOC_14619
I
MTR_2g098470
Medicago truncatula
MTR_2g098470
I
MTR_3g078770
Medicago truncatula
MTR_3g078770
I
MTR_5g087790
Medicago truncatula
MTR_5g087790
I
OBART07G26760
Oryza barthii
OBART07G26760
I
OGLUM03G15860
Oryza glumaepatula
OGLUM03G15860
I
OMERI03G14140
Oryza meridionalis
OMERI03G14140
I
OMERI07G23380
Oryza meridionalis
OMERI07G23380
I
ONIVA03G16680
Oryza nivara
ONIVA03G16680
I
ONIVA07G26490
Oryza nivara
ONIVA07G26490
I
OPUNC03G15240
Oryza punctata
OPUNC03G15240
I
OPUNC07G25150
Oryza punctata
OPUNC07G25150
I
orange1.1g007017m.g
Citrus sinensis
orange1.1g007017m.g
I
orange1.1g007174m.g
Citrus sinensis
orange1.1g007174m.g
I
orange1.1g007662m.g
Citrus sinensis
orange1.1g007662m.g
I
orange1.1g009144m.g
Citrus sinensis
orange1.1g009144m.g
I
ORGLA03G0150600
Oryza glaberrima
ORGLA03G0150600
I
ORGLA07G0211700
Oryza glaberrima
ORGLA07G0211700
I
ORUFI03G16290
Oryza rufipogon
ORUFI03G16290
I
ORUFI07G27710
Oryza rufipogon
ORUFI07G27710
I
OS03G0324200
Oryza sativa
OS03G0324200
I
OS03G0324300
Oryza sativa
OS03G0324300
I
OS07G0685700
Oryza sativa
OS07G0685700
I
Pavir.Bb03705
Panicum virgatum
Pavir.Bb03705
I
Pavir.Ia03450
Panicum virgatum
Pavir.Ia03450
I
Pavir.Ib01512
Panicum virgatum
Pavir.Ib01512
I
Pavir.J01001
Panicum virgatum
Pavir.J01001
I
PGSC0003DMG400005914
Solanum tuberosum
PGSC0003DMG400005914
I
PGSC0003DMG400005915
Solanum tuberosum
PGSC0003DMG400005915
I
PGSC0003DMG400008712
Solanum tuberosum
PGSC0003DMG400008712
I
PGSC0003DMG400027507
Solanum tuberosum
PGSC0003DMG400027507
I
PGSC0003DMG400029908
Solanum tuberosum
PGSC0003DMG400029908
I
PK01239.1
Cannabis sativa
PK01239.1
I
PK13351.1
Cannabis sativa
PK13351.1
I
PK19114.1
Cannabis sativa
PK19114.1
I
Pm017009
Prunus mume
Pm017009
I
Pm028171
Prunus mume
Pm028171
I
POPTR_0001s05360
Populus trichocarpa
POPTR_0001s05360
I
POPTR_0004s20830
Populus trichocarpa
POPTR_0004s20830
I
POPTR_0008s01200
Populus trichocarpa
POPTR_0008s01200
I
POPTR_0009s16080
Populus trichocarpa
POPTR_0009s16080
I
POPTR_0010s25370
Populus trichocarpa
POPTR_0010s25370
I
PRUPE_ppa003493mg
Prunus persica
PRUPE_ppa003493mg
I
PRUPE_ppa003550mg
Prunus persica
PRUPE_ppa003550mg
I
Q9ZWK1_TOBAC
Nicotiana tabacum
Q9ZWK1_TOBAC
D
SapurV1A.0036s0870
Salix purpurea
SapurV1A.0036s0870
I
SapurV1A.0070s0670
Salix purpurea
SapurV1A.0070s0670
I
SapurV1A.0561s0140
Salix purpurea
SapurV1A.0561s0140
I
SapurV1A.0615s0150
Salix purpurea
SapurV1A.0615s0150
I
Sb01g036740
Sorghum bicolor
Sb01g036740
I
Sb02g043350
Sorghum bicolor
Sb02g043350
I
SELMODRAFT_112063
Selaginella moellendorffii
SELMODRAFT_112063
I
SELMODRAFT_136229
Selaginella moellendorffii
SELMODRAFT_136229
I
SELMODRAFT_16064
Selaginella moellendorffii
SELMODRAFT_16064
I
SELMODRAFT_16065
Selaginella moellendorffii
SELMODRAFT_16065
I
Si029213m.g
Setaria italica
Si029213m.g
I
Si034616m.g
Setaria italica
Si034616m.g
I
Solyc01g009170.2
Solanum lycopersicum
Solyc01g009170.2
I
Solyc01g014480.2
Solanum lycopersicum
Solyc01g014480.2
I
Solyc01g096810.2
Solanum lycopersicum
Solyc01g096810.2
I
Solyc06g073720.1
Solanum lycopersicum
Solyc06g073720.1
I
Solyc06g073730.1
Solanum lycopersicum
Solyc06g073730.1
I
TCM_042022
Theobroma cacao
TCM_042022
I
Thhalv10001938m.g
Eutrema salsugineum
Thhalv10001938m.g
I
Traes_2BS_647C82888
Triticum aestivum
Traes_2BS_647C82888
I
Traes_4AS_2BDA1260C
Triticum aestivum
Traes_4AS_2BDA1260C
I
Traes_4DL_C083C804E
Triticum aestivum
Traes_4DL_C083C804E
I
EIL3
Vitis vinifera
VIT_06s0004g01610
I
VIT_06s0009g01380
Vitis vinifera
VIT_06s0009g01380
I
VIT_13s0047g00250
Vitis vinifera
VIT_13s0047g00250
I