e_gw1.36.139.1 (Nectria haematococca)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00172 (Zn_clus) IPR001138 e_gw1.36.139.1 T389443_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ANIA_00568
M01347_2.00 		Aspergillus nidulans
NRDWBSCCGV
BCGGSVWHYN		 PBM
Lambert et al.(2019)
pEX0204 		0.596 0.615
ANIA_03769
M01368_2.00 		Aspergillus nidulans
DDWCSCCGN
NCGGSGWHH		 PBM
Lambert et al.(2019)
pEX0420 		0.552 0.641
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
e_gw1.36.139.1 Zinc cluster 20 58

Links

Other Zinc cluster family TFs
Other Nectria haematococca TFs

61 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29794.m003368 Ricinus communis 29794.m003368 N
SIGC Arabidopsis lyrata Al_scaffold_0005_2291 N
AMTR_s00056p00209700 Amborella trichopoda AMTR_s00056p00209700 N
SIGC Arabidopsis thaliana AT3G53920 N
Bo4g120510 Brassica oleracea Bo4g120510 N
Bostr.11793s0002 Boechera stricta Bostr.11793s0002 N
Bra014857 Brassica rapa Bra014857 N
Cagra.2252s0020 Capsella grandiflora Cagra.2252s0020 N
Carubv10016920m.g Capsella rubella Carubv10016920m.g N
cassava18263.valid.m1 Manihot esculenta cassava18263.valid.m1 N
Ca_14896 Cicer arietinum Ca_14896 N
Ciclev10007968m.g Citrus clementina Ciclev10007968m.g N
Eucgr.C00620 Eucalyptus grandis Eucgr.C00620 N
gene09028-v1.0-hybrid Fragaria vesca gene09028-v1.0-hybrid N
GLYMA14G22170 Glycine max GLYMA14G22170 N
GLYMA17G26620 Glycine max GLYMA17G26620 N
Gorai.010G103500 Gossypium raimondii Gorai.010G103500 N
GSMUA_Achr4G01060_001 Musa acuminata GSMUA_Achr4G01060_001 N
MDP0000135483 Malus domestica MDP0000135483 N
MDP0000315125 Malus domestica MDP0000315125 N
mgf012819m Mimulus guttatus mgf012819m N
MTR_1g007370 Medicago truncatula MTR_1g007370 N
orange1.1g009449m.g Citrus sinensis orange1.1g009449m.g N
PDK_20s1533271g001 Phoenix dactylifera PDK_20s1533271g001 N
PGSC0003DMG400025465 Solanum tuberosum PGSC0003DMG400025465 N
PK05603.1 Cannabis sativa PK05603.1 N
Pm005207 Prunus mume Pm005207 N
Pm005208 Prunus mume Pm005208 N
PRUPE_ppa003696mg Prunus persica PRUPE_ppa003696mg N
Solyc08g065970.2 Solanum lycopersicum Solyc08g065970.2 N
TCM_037242 Theobroma cacao TCM_037242 N
Thhalv10010251m.g Eutrema salsugineum Thhalv10010251m.g N
SIGC Vitis vinifera VIT_04s0008g00600 N