Cagra.1968s0048 (Capsella grandiflora)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 Cagra.1968s0048 T022774_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.1968s0048.1.p B3 56 162

Links

Other B3 family TFs
Other Capsella grandiflora TFs

193 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00114p00142630 Amborella trichopoda AMTR_s00114p00142630 I 0.724
BGIOSGA014498 Oryza indica BGIOSGA014498 I 0.772
Bo00853s090 Brassica oleracea Bo00853s090 I 0.716
Bo4g197410 Brassica oleracea Bo4g197410 I 0.822
Bra040478 Brassica rapa Bra040478 I 0.830
BRADI5G19260 Brachypodium distachyon BRADI5G19260 I 0.782
GLYMA03G42301 Glycine max GLYMA03G42301 I 0.832
GLYMA07G05381 Glycine max GLYMA07G05381 I 0.851
GLYMA16G01951 Glycine max GLYMA16G01951 I 0.851
GLYMA19G45090 Glycine max GLYMA19G45090 I 0.842
GSMUA_Achr1G03600_001 Musa acuminata GSMUA_Achr1G03600_001 I 0.762
GSMUA_Achr4G26430_001 Musa acuminata GSMUA_Achr4G26430_001 I 0.782
LPERR02G22870 Leersia perrieri LPERR02G22870 I 0.782
MLOC_44012 Hordeum vulgare MLOC_44012 I 0.704
MLOC_66387 Hordeum vulgare MLOC_66387 I 0.772
MTR_7g117455 Medicago truncatula MTR_7g117455 I 0.861
MTR_8g023990 Medicago truncatula MTR_8g023990 I 0.832
OB02G35380 Oryza brachyantha OB02G35380 I 0.782
OBART04G22880 Oryza barthii OBART04G22880 I 0.782
OGLUM04G22780 Oryza glumaepatula OGLUM04G22780 I 0.782
ONIVA04G22030 Oryza nivara ONIVA04G22030 I 0.772
OPUNC04G20430 Oryza punctata OPUNC04G20430 I 0.838
ORGLA04G0198400 Oryza glaberrima ORGLA04G0198400 I 0.782
ORUFI04G24570 Oryza rufipogon ORUFI04G24570 I 0.723
OS04G0581400 Oryza sativa OS04G0581400 I 0.782
PGSC0003DMG400005856 Solanum tuberosum PGSC0003DMG400005856 I 0.832
PGSC0003DMG400005857 Solanum tuberosum PGSC0003DMG400005857 I 0.832
PGSC0003DMG400012222 Solanum tuberosum PGSC0003DMG400012222 I 0.851
POPTR_0001s45650 Populus trichocarpa POPTR_0001s45650 I 0.832
POPTR_0011s15270 Populus trichocarpa POPTR_0011s15270 I 0.851
POPTR_0014s10290 Populus trichocarpa POPTR_0014s10290 I 0.842
PRUPE_ppa019131mg Prunus persica PRUPE_ppa019131mg I 0.851
NGA4 Arabidopsis lyrata scaffold_604140.1 I 0.761
Solyc08g013690.1 Solanum lycopersicum Solyc08g013690.1 I 0.832
Solyc08g013700.1 Solanum lycopersicum Solyc08g013700.1 I 0.822
Solyc08g083400.2 Solanum lycopersicum Solyc08g083400.2 I 0.832
TCM_005014 Theobroma cacao TCM_005014 I 0.851
TCM_015590 Theobroma cacao TCM_015590 I 0.842
Traes_1BL_53C31B54B Triticum aestivum Traes_1BL_53C31B54B I 0.741
Traes_2AL_41E2E66D9 Triticum aestivum Traes_2AL_41E2E66D9 I 0.798
Traes_2DL_896E50180 Triticum aestivum Traes_2DL_896E50180 I 0.893
Traes_6AL_44AA5642C Triticum aestivum Traes_6AL_44AA5642C I 0.772
Traes_6DL_359607E93 Triticum aestivum Traes_6DL_359607E93 I 0.772
TRIUR3_24950 Triticum urartu TRIUR3_24950 I 0.700
VIT_02s0025g03000 Vitis vinifera VIT_02s0025g03000 I 0.851
VIT_15s0048g02370 Vitis vinifera VIT_15s0048g02370 I 0.812
Ca_01368 Cicer arietinum Ca_01368 I 0.842
Cla006845 Citrullus lanatus Cla006845 I 0.752
Pm024248 Prunus mume Pm024248 I 0.851
30068.m002615 Ricinus communis 30068.m002615 I 0.792
30076.m004471 Ricinus communis 30076.m004471 I 0.861
cassava29779.valid.m1 Manihot esculenta cassava29779.valid.m1 I 0.842
cassava36125.valid.m1 Manihot esculenta cassava36125.valid.m1 I 0.822
cassava39049.m1 Manihot esculenta cassava39049.m1 I 0.792
Cucsa.193290 Cucumis sativus Cucsa.193290 I 0.812
mgf023686m Mimulus guttatus mgf023686m I 0.723
Aquca_037_00291 Aquilegia coerulea Aquca_037_00291 I 0.812
Bostr.7365s0004 Boechera stricta Bostr.7365s0004 I 0.769
Cagra.0483s0046 Capsella grandiflora Cagra.0483s0046 I 0.802
Carubv10017696m.g Capsella rubella Carubv10017696m.g I 0.792
Ciclev10020034m.g Citrus clementina Ciclev10020034m.g I 0.802
Ciclev10020450m.g Citrus clementina Ciclev10020450m.g I 0.842
Eucgr.E01093 Eucalyptus grandis Eucgr.E01093 I 0.822
Eucgr.L00348 Eucalyptus grandis Eucgr.L00348 I 0.851
evm.TU.supercontig_37.108 Carica papaya evm.TU.supercontig_37.108 I 0.861
evm.TU.supercontig_57.71 Carica papaya evm.TU.supercontig_57.71 I 0.851
gene01855-v1.0-hybrid Fragaria vesca gene01855-v1.0-hybrid I 0.851
gene18594-v1.0-hybrid Fragaria vesca gene18594-v1.0-hybrid I 0.822
Gorai.001G150200 Gossypium raimondii Gorai.001G150200 I 0.861
Gorai.003G073600 Gossypium raimondii Gorai.003G073600 I 0.832
Gorai.007G114200 Gossypium raimondii Gorai.007G114200 I 0.842
Gorai.008G132400 Gossypium raimondii Gorai.008G132400 I 0.812
Gorai.008G261100 Gossypium raimondii Gorai.008G261100 I 0.802
orange1.1g013565m.g Citrus sinensis orange1.1g013565m.g I 0.802
orange1.1g015743m.g Citrus sinensis orange1.1g015743m.g I 0.842
Pavir.Ab02711 Panicum virgatum Pavir.Ab02711 I 0.703
SapurV1A.0003s0340 Salix purpurea SapurV1A.0003s0340 I 0.851
SapurV1A.0162s0420 Salix purpurea SapurV1A.0162s0420 I 0.842
SapurV1A.0285s0040 Salix purpurea SapurV1A.0285s0040 I 0.842
SapurV1A.0666s0090 Salix purpurea SapurV1A.0666s0090 I 0.857
Thhalv10006123m.g Eutrema salsugineum Thhalv10006123m.g I 0.802
PK11025.1 Cannabis sativa PK11025.1 I 0.842
PK21157.1 Cannabis sativa PK21157.1 I 0.822
chr1.CM0105.800.nc Lotus japonicus chr1.CM0105.800.nc I 0.842
LjT15D16.50.nc Lotus japonicus LjT15D16.50.nc I 0.851
NGA3 Arabidopsis thaliana AT1G01030 N 1.000
NGA1 Arabidopsis thaliana AT2G46870 N 0.832
NGA2 Arabidopsis thaliana AT3G61970 N 0.792
BGIOSGA005835 Oryza indica BGIOSGA005835 N 0.792
BGIOSGA011738 Oryza indica BGIOSGA011738 N 0.792
BGIOSGA031489 Oryza indica BGIOSGA031489 N 0.723
Bo3g001110 Brassica oleracea Bo3g001110 N 0.960
Bo3g039420 Brassica oleracea Bo3g039420 N 0.832
Bo4g006900 Brassica oleracea Bo4g006900 N 0.822
Bo4g099000 Brassica oleracea Bo4g099000 N 0.782
Bo5g002790 Brassica oleracea Bo5g002790 N 0.980
Bo6g079210 Brassica oleracea Bo6g079210 N 0.802
Bo8g097490 Brassica oleracea Bo8g097490 N 0.812
Bra000434 Brassica rapa Bra000434 N 0.822
Bra003482 Brassica rapa Bra003482 N 0.782
Bra004501 Brassica rapa Bra004501 N 0.832
Bra007646 Brassica rapa Bra007646 N 0.812
Bra014415 Brassica rapa Bra014415 N 0.792
Bra030497 Brassica rapa Bra030497 N 0.970
Bra033294 Brassica rapa Bra033294 N 0.960
BRADI1G77150 Brachypodium distachyon BRADI1G77150 N 0.762
BRADI3G32140 Brachypodium distachyon BRADI3G32140 N 0.713
F775_04153 Aegilops tauschii F775_04153 N 0.703
NGA3 Arabidopsis lyrata fgenesh2_kg.1__134__AT1G01030.1 N 1.000
fgenesh2_kg.181__3__AT2G46870.1 Arabidopsis lyrata fgenesh2_kg.181__3__AT2G46870.1 N 0.832
fgenesh2_kg.4__2914__AT2G46870.1 Arabidopsis lyrata fgenesh2_kg.4__2914__AT2G46870.1 N 0.832
NGA2 Arabidopsis lyrata fgenesh2_kg.5__2696__AT3G61970.1 N 0.802
GRMZM2G018485 Zea mays GRMZM2G018485 N 0.772
GRMZM2G024948 Zea mays GRMZM2G024948 N 0.733
GRMZM2G082227 Zea mays GRMZM2G082227 N 0.782
GRMZM2G098443 Zea mays GRMZM2G098443 N 0.782
GRMZM2G102059 Zea mays GRMZM2G102059 N 0.762
GRMZM2G142999 Zea mays GRMZM2G142999 N 0.717
GSMUA_Achr5G20340_001 Musa acuminata GSMUA_Achr5G20340_001 N 0.752
LPERR03G01560 Leersia perrieri LPERR03G01560 N 0.802
LPERR04G18630 Leersia perrieri LPERR04G18630 N 0.772
LPERR10G12990 Leersia perrieri LPERR10G12990 N 0.733
MLOC_74058 Hordeum vulgare MLOC_74058 N 0.723
OB03G11610 Oryza brachyantha OB03G11610 N 0.802
OB10G24100 Oryza brachyantha OB10G24100 N 0.718
OBART02G28100 Oryza barthii OBART02G28100 N 0.792
OBART03G01650 Oryza barthii OBART03G01650 N 0.792
OBART10G17010 Oryza barthii OBART10G17010 N 0.723
OGLUM02G28660 Oryza glumaepatula OGLUM02G28660 N 0.792
OGLUM03G01630 Oryza glumaepatula OGLUM03G01630 N 0.792
OGLUM10G17040 Oryza glumaepatula OGLUM10G17040 N 0.723
OLONG_022770 Oryza longistaminata OLONG_022770 N 0.700
OMERI02G27240 Oryza meridionalis OMERI02G27240 N 0.782
OMERI03G01600 Oryza meridionalis OMERI03G01600 N 0.792
OMERI10G13480 Oryza meridionalis OMERI10G13480 N 0.723
ONIVA02G30750 Oryza nivara ONIVA02G30750 N 0.792
ONIVA10G18740 Oryza nivara ONIVA10G18740 N 0.723
ONIVA12G15340 Oryza nivara ONIVA12G15340 N 0.792
OPUNC02G25780 Oryza punctata OPUNC02G25780 N 0.782
OPUNC03G01540 Oryza punctata OPUNC03G01540 N 0.792
OPUNC10G16940 Oryza punctata OPUNC10G16940 N 0.723
ORGLA02G0241100 Oryza glaberrima ORGLA02G0241100 N 0.792
ORGLA03G0014300 Oryza glaberrima ORGLA03G0014300 N 0.792
ORGLA10G0119700 Oryza glaberrima ORGLA10G0119700 N 0.723
ORUFI02G29620 Oryza rufipogon ORUFI02G29620 N 0.792
ORUFI10G18030 Oryza rufipogon ORUFI10G18030 N 0.723
OS02G0683500 Oryza sativa OS02G0683500 N 0.792
OS03G0120900 Oryza sativa OS03G0120900 N 0.792
OS10G0537100 Oryza sativa OS10G0537100 N 0.723
POPTR_0002s18260 Populus trichocarpa POPTR_0002s18260 N 0.842
PRUPE_ppa015999mg Prunus persica PRUPE_ppa015999mg N 0.812
Sb01g030520 Sorghum bicolor Sb01g030520 N 0.714
Sb01g049150 Sorghum bicolor Sb01g049150 N 0.782
Sb04g031710 Sorghum bicolor Sb04g031710 N 0.733
Sb06g026370 Sorghum bicolor Sb06g026370 N 0.772
Si011823m.g Setaria italica Si011823m.g N 0.762
Si036864m.g Setaria italica Si036864m.g N 0.792
Si039972m.g Setaria italica Si039972m.g N 0.713
Traes_1AL_29F610E15 Triticum aestivum Traes_1AL_29F610E15 N 0.713
Traes_2BL_439C794F5 Triticum aestivum Traes_2BL_439C794F5 N 0.772
Traes_2DL_2D1980C7B Triticum aestivum Traes_2DL_2D1980C7B N 0.700
Traes_4BL_D9784B20C1 Triticum aestivum Traes_4BL_D9784B20C1 N 0.772
Traes_4DL_A83084AC1 Triticum aestivum Traes_4DL_A83084AC1 N 0.792
Traes_4DL_D0F3E9568 Triticum aestivum Traes_4DL_D0F3E9568 N 0.762
TRIUR3_01515 Triticum urartu TRIUR3_01515 N 0.731
TRIUR3_06598 Triticum urartu TRIUR3_06598 N 0.732
TRIUR3_29732 Triticum urartu TRIUR3_29732 N 0.733
Cla005055 Citrullus lanatus Cla005055 N 0.806
Cla014858 Citrullus lanatus Cla014858 N 0.798
Pm028725 Prunus mume Pm028725 N 0.812
Cucsa.106780 Cucumis sativus Cucsa.106780 N 0.808
Cucsa.349830 Cucumis sativus Cucsa.349830 N 0.752
mgf023769m Mimulus guttatus mgf023769m N 0.802
Bostr.13158s0202 Boechera stricta Bostr.13158s0202 N 0.802
Bostr.25993s0080 Boechera stricta Bostr.25993s0080 N 0.842
Bostr.5325s0023 Boechera stricta Bostr.5325s0023 N 0.990
Cagra.0050s0013 Capsella grandiflora Cagra.0050s0013 N 0.832
Carubv10009540m.g Capsella rubella Carubv10009540m.g N 1.000
Carubv10023656m.g Capsella rubella Carubv10023656m.g N 0.832
Gorai.004G128200 Gossypium raimondii Gorai.004G128200 N 0.800
MDP0000128295 Malus domestica MDP0000128295 N 0.830
MDP0000138163 Malus domestica MDP0000138163 N 0.812
MDP0000288808 Malus domestica MDP0000288808 N 0.792
Pavir.Aa00929 Panicum virgatum Pavir.Aa00929 N 0.733
Pavir.Ga00960 Panicum virgatum Pavir.Ga00960 N 0.772
Pavir.Ia04549 Panicum virgatum Pavir.Ia04549 N 0.782
Pavir.Ib00059 Panicum virgatum Pavir.Ib00059 N 0.782
Pavir.J06582 Panicum virgatum Pavir.J06582 N 0.713
Pavir.J27608 Panicum virgatum Pavir.J27608 N 0.758
Pavir.J35382 Panicum virgatum Pavir.J35382 N 0.713
Pavir.J38226 Panicum virgatum Pavir.J38226 N 0.772
Thhalv10001555m.g Eutrema salsugineum Thhalv10001555m.g N 0.812
Thhalv10008068m.g Eutrema salsugineum Thhalv10008068m.g N 1.000