OB0197G10010 (Oryza brachyantha)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 OB0197G10010 T041948_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK18401.1
M01126_2.00 		Cannabis sativa
NNNVCACGTGBN
NVCACGTGBNNN		 PBM
Lambert et al.(2019)
pTH11272 		0.863 0.784
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OB0197G10010.1 bHLH 47 97

Links

Other bHLH family TFs
Other Oryza brachyantha TFs

59 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00093p00164790 Amborella trichopoda AMTR_s00093p00164790 N
WIP3 Arabidopsis thaliana AT1G08290 N
WIP6 Arabidopsis thaliana AT1G13290 N
BGIOSGA000452 Oryza indica BGIOSGA000452 N
BGIOSGA031001 Oryza indica BGIOSGA031001 N
Bo5g015200 Brassica oleracea Bo5g015200 N
Bo5g081360 Brassica oleracea Bo5g081360 N
Bra019822 Brassica rapa Bra019822 N
BRADI2G23870 Brachypodium distachyon BRADI2G23870 N
BRADI2G55540 Brachypodium distachyon BRADI2G55540 N
BRADI3G39820 Brachypodium distachyon BRADI3G39820 N
BRADI4G33557 Brachypodium distachyon BRADI4G33557 N
F775_11193 Aegilops tauschii F775_11193 N
F775_14972 Aegilops tauschii F775_14972 N
WIP3 Arabidopsis lyrata fgenesh1_pg.C_scaffold_1000684 N
TT1 Arabidopsis lyrata fgenesh2_kg.1__3606__AT1G34790.1 N
GLYMA01G22120 Glycine max GLYMA01G22120 N
GLYMA02G10970 Glycine max GLYMA02G10970 N
GLYMA08G16390 Glycine max GLYMA08G16390 N
GLYMA10G34770 Glycine max GLYMA10G34770 N
GLYMA11G19060 Glycine max GLYMA11G19060 N
GLYMA12G09400 Glycine max GLYMA12G09400 N
GLYMA12G30930 Glycine max GLYMA12G30930 N
GLYMA12G36660 Glycine max GLYMA12G36660 N
GLYMA13G01720 Glycine max GLYMA13G01720 N
GLYMA13G27371 Glycine max GLYMA13G27371 N
GLYMA13G39370 Glycine max GLYMA13G39370 N
GLYMA14G35140 Glycine max GLYMA14G35140 N
GLYMA15G42870 Glycine max GLYMA15G42870 N
GLYMA20G32750 Glycine max GLYMA20G32750 N
GRMZM2G000836 Zea mays GRMZM2G000836 N
GRMZM2G061545 Zea mays GRMZM2G061545 N
GRMZM2G071101 Zea mays GRMZM2G071101 N
GRMZM2G084014 Zea mays GRMZM2G084014 N
GRMZM2G445684 Zea mays GRMZM2G445684 N
GSMUA_Achr3G03850_001 Musa acuminata GSMUA_Achr3G03850_001 N
GSMUA_Achr3G11870_001 Musa acuminata GSMUA_Achr3G11870_001 N
GSMUA_Achr4G01560_001 Musa acuminata GSMUA_Achr4G01560_001 N
GSMUA_Achr9G12600_001 Musa acuminata GSMUA_Achr9G12600_001 N
LPERR01G32600 Leersia perrieri LPERR01G32600 N
LPERR08G16620 Leersia perrieri LPERR08G16620 N
LPERR09G10700 Leersia perrieri LPERR09G10700 N
MLOC_2787 Hordeum vulgare MLOC_2787 N
MLOC_65351 Hordeum vulgare MLOC_65351 N
MTR_1g093095 Medicago truncatula MTR_1g093095 N
OB05G26090 Oryza brachyantha OB05G26090 N
OB08G26650 Oryza brachyantha OB08G26650 N
OBART01G37960 Oryza barthii OBART01G37960 N
OBART06G20890 Oryza barthii OBART06G20890 N
OBART08G19670 Oryza barthii OBART08G19670 N
OGLUM01G42130 Oryza glumaepatula OGLUM01G42130 N
OGLUM05G19360 Oryza glumaepatula OGLUM05G19360 N
OGLUM08G20830 Oryza glumaepatula OGLUM08G20830 N
OGLUM09G15150 Oryza glumaepatula OGLUM09G15150 N
OMERI01G34920 Oryza meridionalis OMERI01G34920 N
OMERI08G16450 Oryza meridionalis OMERI08G16450 N
OMERI09G11270 Oryza meridionalis OMERI09G11270 N
ONIVA04G25710 Oryza nivara ONIVA04G25710 N
ONIVA08G21960 Oryza nivara ONIVA08G21960 N
ONIVA09G15100 Oryza nivara ONIVA09G15100 N
OPUNC01G36780 Oryza punctata OPUNC01G36780 N
OPUNC08G17810 Oryza punctata OPUNC08G17810 N
OPUNC09G12930 Oryza punctata OPUNC09G12930 N
ORGLA01G0317700 Oryza glaberrima ORGLA01G0317700 N
ORGLA08G0173000 Oryza glaberrima ORGLA08G0173000 N
ORGLA09G0111700 Oryza glaberrima ORGLA09G0111700 N
ORUFI01G41290 Oryza rufipogon ORUFI01G41290 N
ORUFI09G15680 Oryza rufipogon ORUFI09G15680 N
OS01G0859100 Oryza sativa OS01G0859100 N
OS08G0504000 Oryza sativa OS08G0504000 N
OS09G0485600 Oryza sativa OS09G0485600 N
PGSC0003DMG400006808 Solanum tuberosum PGSC0003DMG400006808 N
PGSC0003DMG400007112 Solanum tuberosum PGSC0003DMG400007112 N
POPTR_0001s05630 Populus trichocarpa POPTR_0001s05630 N
POPTR_0001s27490 Populus trichocarpa POPTR_0001s27490 N
POPTR_0004s19460 Populus trichocarpa POPTR_0004s19460 N
POPTR_0009s06700 Populus trichocarpa POPTR_0009s06700 N
POPTR_0009s14590 Populus trichocarpa POPTR_0009s14590 N
POPTR_0010s13910 Populus trichocarpa POPTR_0010s13910 N
PRUPE_ppa020013m2g Prunus persica PRUPE_ppa020013m2g N
PRUPE_ppa023619mg Prunus persica PRUPE_ppa023619mg N
Sb02g028220 Sorghum bicolor Sb02g028220 N
Sb07g028010 Sorghum bicolor Sb07g028010 N
Sb09g021850 Sorghum bicolor Sb09g021850 N
SELMODRAFT_110681 Selaginella moellendorffii SELMODRAFT_110681 N
SELMODRAFT_128378 Selaginella moellendorffii SELMODRAFT_128378 N
Si013819m.g Setaria italica Si013819m.g N
Si022296m.g Setaria italica Si022296m.g N
Si029897m.g Setaria italica Si029897m.g N
Solyc01g087050.2 Solanum lycopersicum Solyc01g087050.2 N
TCM_005892 Theobroma cacao TCM_005892 N
TCM_034881 Theobroma cacao TCM_034881 N
TCM_041441 Theobroma cacao TCM_041441 N
TRAES3BF099700020CFD_g Triticum aestivum TRAES3BF099700020CFD_g N
Traes_5DL_51643AC9F Triticum aestivum Traes_5DL_51643AC9F N
Traes_7AS_8054DC45D Triticum aestivum Traes_7AS_8054DC45D N
TRIUR3_30490 Triticum urartu TRIUR3_30490 N
WIP3 Vitis vinifera VIT_06s0080g00270 N
TT1 Vitis vinifera VIT_18s0001g05860 N
Ca_07051 Cicer arietinum Ca_07051 N
Ca_16482 Cicer arietinum Ca_16482 N
Ca_21713 Cicer arietinum Ca_21713 N
Ca_27078 Cicer arietinum Ca_27078 N
Cla000184 Citrullus lanatus Cla000184 N
Cla015481 Citrullus lanatus Cla015481 N
Pm001374 Prunus mume Pm001374 N
29908.m006047 Ricinus communis 29908.m006047 N
30055.m001542 Ricinus communis 30055.m001542 N
30061.m000294 Ricinus communis 30061.m000294 N
cassava13451.valid.m1 Manihot esculenta cassava13451.valid.m1 N
cassava16214.m1 Manihot esculenta cassava16214.m1 N
cassava39829.m1 Manihot esculenta cassava39829.m1 N
cassava44390.m1 Manihot esculenta cassava44390.m1 N
Cucsa.050260 Cucumis sativus Cucsa.050260 N
Cucsa.065460 Cucumis sativus Cucsa.065460 N
Cucsa.199850 Cucumis sativus Cucsa.199850 N
mgf019910m Mimulus guttatus mgf019910m N
mgf022319m Mimulus guttatus mgf022319m N
Aquca_004_00109 Aquilegia coerulea Aquca_004_00109 N
Aquca_006_00227 Aquilegia coerulea Aquca_006_00227 N
Aquca_040_00077 Aquilegia coerulea Aquca_040_00077 N
Bostr.1040s0072 Boechera stricta Bostr.1040s0072 N
Bostr.25219s0116 Boechera stricta Bostr.25219s0116 N
Cagra.0764s0003 Capsella grandiflora Cagra.0764s0003 N
Cagra.4395s0018 Capsella grandiflora Cagra.4395s0018 N
Carubv10009617m.g Capsella rubella Carubv10009617m.g N
Carubv10012266m.g Capsella rubella Carubv10012266m.g N
Ciclev10003648m.g Citrus clementina Ciclev10003648m.g N
Ciclev10028757m.g Citrus clementina Ciclev10028757m.g N
Eucgr.B03870 Eucalyptus grandis Eucgr.B03870 N
Eucgr.J01266 Eucalyptus grandis Eucgr.J01266 N
evm.TU.contig_31438 Carica papaya evm.TU.contig_31438 N
evm.TU.contig_35924 Carica papaya evm.TU.contig_35924 N
gene22042-v1.0-hybrid Fragaria vesca gene22042-v1.0-hybrid N
Gorai.001G121700 Gossypium raimondii Gorai.001G121700 N
Gorai.004G037000 Gossypium raimondii Gorai.004G037000 N
Gorai.004G065400 Gossypium raimondii Gorai.004G065400 N
Gorai.006G111400 Gossypium raimondii Gorai.006G111400 N
Gorai.007G177300 Gossypium raimondii Gorai.007G177300 N
Gorai.010G039600 Gossypium raimondii Gorai.010G039600 N
Lus10004887.g Linum usitatissimum Lus10004887.g N
Lus10020597.g Linum usitatissimum Lus10020597.g N
Lus10029525.g Linum usitatissimum Lus10029525.g N
Lus10033454.g Linum usitatissimum Lus10033454.g N
Lus10039613.g Linum usitatissimum Lus10039613.g N
MDP0000131949 Malus domestica MDP0000131949 N
MDP0000142494 Malus domestica MDP0000142494 N
MDP0000144266 Malus domestica MDP0000144266 N
MDP0000300013 Malus domestica MDP0000300013 N
MDP0000573922 Malus domestica MDP0000573922 N
orange1.1g037179m.g Citrus sinensis orange1.1g037179m.g N
orange1.1g037234m.g Citrus sinensis orange1.1g037234m.g N
orange1.1g039549m.g Citrus sinensis orange1.1g039549m.g N
Pavir.Ba01731 Panicum virgatum Pavir.Ba01731 N
Pavir.Fa00506 Panicum virgatum Pavir.Fa00506 N
Pavir.Fb01879 Panicum virgatum Pavir.Fb01879 N
Pavir.J11927 Panicum virgatum Pavir.J11927 N
SapurV1A.0027s0280 Salix purpurea SapurV1A.0027s0280 N
SapurV1A.0080s0360 Salix purpurea SapurV1A.0080s0360 N
SapurV1A.0219s0040 Salix purpurea SapurV1A.0219s0040 N
Thhalv10008125m.g Eutrema salsugineum Thhalv10008125m.g N
PK05257.1 Cannabis sativa PK05257.1 N
chr3.CM1144.10.nc Lotus japonicus chr3.CM1144.10.nc N
LjSGA_032817.1 Lotus japonicus LjSGA_032817.1 N