CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LEMA_P078460.1
(
Leptosphaeria maculans
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
LEMA_P078460.1
T121321_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
rst2
M01186_2.00
Schizosaccharomyces pombe
NNCCCCDCNN
NNGHGGGGNN
PBM
Lambert et al.(2019)
pTH11144
0.787
0.783
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CBX98607
C2H2 ZF
60
82
HVCATCTRSFARLEHLKRHERSH
CBX98607
C2H2 ZF
88
111
FECPQCTRCFARRDLLLRHQQKLH
Links
Other
C2H2 ZF
family TFs
Other
Leptosphaeria maculans
TFs
184 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SPL8
Arabidopsis thaliana
AT1G02065
D
fgenesh1_pg.scaffold_194000034
Physcomitrella patens
fgenesh1_pg.scaffold_194000034
D
fgenesh1_pg.scaffold_252000020
Physcomitrella patens
fgenesh1_pg.scaffold_252000020
D
AMTR_s00019p00235390
Amborella trichopoda
AMTR_s00019p00235390
I
BGIOSGA007655
Oryza indica
BGIOSGA007655
I
BGIOSGA017275
Oryza indica
BGIOSGA017275
I
SPL10
Oryza indica
BGIOSGA023408
I
Bo5g001290
Brassica oleracea
Bo5g001290
I
Bo8g118210
Brassica oleracea
Bo8g118210
I
Bra032662
Brassica rapa
Bra032662
I
Bra033221
Brassica rapa
Bra033221
I
BRADI1G31390
Brachypodium distachyon
BRADI1G31390
I
BRADI3G05720
Brachypodium distachyon
BRADI3G05720
I
BRADI5G24670
Brachypodium distachyon
BRADI5G24670
I
F775_00761
Aegilops tauschii
F775_00761
I
SPL8
Arabidopsis lyrata
fgenesh2_kg.1__23__AT1G02065.1
I
GLYMA01G15258
Glycine max
GLYMA01G15258
I
GLYMA03G27180
Glycine max
GLYMA03G27180
I
GLYMA06G36140
Glycine max
GLYMA06G36140
I
GLYMA07G14610
Glycine max
GLYMA07G14610
I
GLYMA12G27330
Glycine max
GLYMA12G27330
I
GRMZM2G036297
Zea mays
GRMZM2G036297
I
GRMZM2G058588
Zea mays
GRMZM2G058588
I
GRMZM2G101499
Zea mays
GRMZM2G101499
I
GRMZM2G111136
Zea mays
GRMZM2G111136
I
GRMZM2G168229
Zea mays
GRMZM2G168229
I
GSMUA_Achr10G06210_001
Musa acuminata
GSMUA_Achr10G06210_001
I
GSMUA_Achr2G11940_001
Musa acuminata
GSMUA_Achr2G11940_001
I
GSMUA_Achr3G00810_001
Musa acuminata
GSMUA_Achr3G00810_001
I
GSMUA_Achr4G20590_001
Musa acuminata
GSMUA_Achr4G20590_001
I
GSMUA_Achr4G24610_001
Musa acuminata
GSMUA_Achr4G24610_001
I
GSMUA_Achr4G28960_001
Musa acuminata
GSMUA_Achr4G28960_001
I
GSMUA_Achr7G05010_001
Musa acuminata
GSMUA_Achr7G05010_001
I
GSMUA_Achr7G08750_001
Musa acuminata
GSMUA_Achr7G08750_001
I
LPERR02G05080
Leersia perrieri
LPERR02G05080
I
LPERR04G23580
Leersia perrieri
LPERR04G23580
I
LPERR06G19480
Leersia perrieri
LPERR06G19480
I
MLOC_326
Hordeum vulgare
MLOC_326
I
MLOC_51510
Hordeum vulgare
MLOC_51510
I
MLOC_57503
Hordeum vulgare
MLOC_57503
I
MLOC_6525
Hordeum vulgare
MLOC_6525
I
MTR_8g005960
Medicago truncatula
MTR_8g005960
I
MTR_8g463140
Medicago truncatula
MTR_8g463140
I
OB02G15090
Oryza brachyantha
OB02G15090
I
OB04G34990
Oryza brachyantha
OB04G34990
I
OB06G31100
Oryza brachyantha
OB06G31100
I
OBART04G27990
Oryza barthii
OBART04G27990
I
OBART06G23500
Oryza barthii
OBART06G23500
I
OGLUM04G27880
Oryza glumaepatula
OGLUM04G27880
I
OGLUM06G24700
Oryza glumaepatula
OGLUM06G24700
I
OLONG_021174
Oryza longistaminata
OLONG_021174
I
OMERI02G06720
Oryza meridionalis
OMERI02G06720
I
OMERI04G23390
Oryza meridionalis
OMERI04G23390
I
OMERI06G23430
Oryza meridionalis
OMERI06G23430
I
ONIVA01G24470
Oryza nivara
ONIVA01G24470
I
ONIVA04G26660
Oryza nivara
ONIVA04G26660
I
OPUNC02G05050
Oryza punctata
OPUNC02G05050
I
OPUNC04G25460
Oryza punctata
OPUNC04G25460
I
ORGLA02G0053800
Oryza glaberrima
ORGLA02G0053800
I
ORGLA04G0242500
Oryza glaberrima
ORGLA04G0242500
I
ORGLA06G0196600
Oryza glaberrima
ORGLA06G0196600
I
ORUFI04G29620
Oryza rufipogon
ORUFI04G29620
I
ORUFI06G25170
Oryza rufipogon
ORUFI06G25170
I
SPL5
Oryza sativa
OS02G0177300
I
SPL8
Oryza sativa
OS04G0656500
I
SPL10
Oryza sativa
OS06G0659100
I
PGSC0003DMG400026027
Solanum tuberosum
PGSC0003DMG400026027
I
PGSC0003DMG400029162
Solanum tuberosum
PGSC0003DMG400029162
I
PGSC0003DMG400032817
Solanum tuberosum
PGSC0003DMG400032817
I
POPTR_0002s14320
Populus trichocarpa
POPTR_0002s14320
I
POPTR_0014s05680
Populus trichocarpa
POPTR_0014s05680
I
PRUPE_ppa022739mg
Prunus persica
PRUPE_ppa022739mg
I
Sb04g005180
Sorghum bicolor
Sb04g005180
I
Sb06g031290
Sorghum bicolor
Sb06g031290
I
Sb10g026200
Sorghum bicolor
Sb10g026200
I
SELMODRAFT_17777
Selaginella moellendorffii
SELMODRAFT_17777
I
SELMODRAFT_28629
Selaginella moellendorffii
SELMODRAFT_28629
I
SELMODRAFT_49502
Selaginella moellendorffii
SELMODRAFT_49502
I
SELMODRAFT_59543
Selaginella moellendorffii
SELMODRAFT_59543
I
SELMODRAFT_59884
Selaginella moellendorffii
SELMODRAFT_59884
I
SELMODRAFT_7674
Selaginella moellendorffii
SELMODRAFT_7674
I
Si006559m.g
Setaria italica
Si006559m.g
I
Si017338m.g
Setaria italica
Si017338m.g
I
Si022315m.g
Setaria italica
Si022315m.g
I
Solyc01g090730.2
Solanum lycopersicum
Solyc01g090730.2
I
Solyc07g053810.2
Solanum lycopersicum
Solyc07g053810.2
I
Solyc10g018780.1
Solanum lycopersicum
Solyc10g018780.1
I
TCM_005622
Theobroma cacao
TCM_005622
I
Traes_7DL_ED348696E
Triticum aestivum
Traes_7DL_ED348696E
I
TRIUR3_10193
Triticum urartu
TRIUR3_10193
I
TRIUR3_34351
Triticum urartu
TRIUR3_34351
I
SPL8
Vitis vinifera
VIT_15s0021g02300
I
Ca_16243
Cicer arietinum
Ca_16243
I
Ca_18942
Cicer arietinum
Ca_18942
I
Cla006776
Citrullus lanatus
Cla006776
I
Cla020006
Citrullus lanatus
Cla020006
I
Pm011381
Prunus mume
Pm011381
I
29983.m003158
Ricinus communis
29983.m003158
I
30174.m008803
Ricinus communis
30174.m008803
I
cassava19899.m1
Manihot esculenta
cassava19899.m1
I
Cucsa.126820
Cucumis sativus
Cucsa.126820
I
Cucsa.196000
Cucumis sativus
Cucsa.196000
I
fgenesh1_pg.scaffold_118000004
Physcomitrella patens
fgenesh1_pg.scaffold_118000004
I
fgenesh1_pg.scaffold_337000032
Physcomitrella patens
fgenesh1_pg.scaffold_337000032
I
fgenesh1_pg.scaffold_50000085
Physcomitrella patens
fgenesh1_pg.scaffold_50000085
I
mgf016085m
Mimulus guttatus
mgf016085m
I
Aquca_024_00116
Aquilegia coerulea
Aquca_024_00116
I
Bostr.5325s0127
Boechera stricta
Bostr.5325s0127
I
Cagra.1968s0141
Capsella grandiflora
Cagra.1968s0141
I
Carubv10009506m.g
Capsella rubella
Carubv10009506m.g
I
Ciclev10021106m.g
Citrus clementina
Ciclev10021106m.g
I
Eucgr.E01600
Eucalyptus grandis
Eucgr.E01600
I
evm.TU.supercontig_149.10
Carica papaya
evm.TU.supercontig_149.10
I
gene04786-v1.0-hybrid
Fragaria vesca
gene04786-v1.0-hybrid
I
gene29726-v1.0-hybrid
Fragaria vesca
gene29726-v1.0-hybrid
I
Gorai.001G176000
Gossypium raimondii
Gorai.001G176000
I
Gorai.008G107400
Gossypium raimondii
Gorai.008G107400
I
Lus10028181.g
Linum usitatissimum
Lus10028181.g
I
Lus10042882.g
Linum usitatissimum
Lus10042882.g
I
MDP0000158607
Malus domestica
MDP0000158607
I
MDP0000803116
Malus domestica
MDP0000803116
I
orange1.1g020302m.g
Citrus sinensis
orange1.1g020302m.g
I
Pavir.Ab00520
Panicum virgatum
Pavir.Ab00520
I
Pavir.Da00293
Panicum virgatum
Pavir.Da00293
I
Pavir.Db00525
Panicum virgatum
Pavir.Db00525
I
Pavir.Ga00066
Panicum virgatum
Pavir.Ga00066
I
Pavir.Gb00284
Panicum virgatum
Pavir.Gb00284
I
SapurV1A.0033s0300
Salix purpurea
SapurV1A.0033s0300
I
SapurV1A.0382s0100
Salix purpurea
SapurV1A.0382s0100
I
Thhalv10008083m.g
Eutrema salsugineum
Thhalv10008083m.g
I
PK25779.1
Cannabis sativa
PK25779.1
I
chr3.CM0160.520.nc
Lotus japonicus
chr3.CM0160.520.nc
I
chr3.CM0282.980.nc
Lotus japonicus
chr3.CM0282.980.nc
I
F775_20508
Aegilops tauschii
F775_20508
N
Traes_7DL_1957A97EC
Triticum aestivum
Traes_7DL_1957A97EC
N
Traes_7DL_2D8356B05
Triticum aestivum
Traes_7DL_2D8356B05
N
TRIUR3_34424
Triticum urartu
TRIUR3_34424
N