Sakowv30043999m.g (Saccoglossus kowalevskii)
C2HC ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01530 (zf-C2HC) IPR002515 Sakowv30043999m.g T159502_2.00 JGI:Metazome (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
23950417_peptide C2HC ZF 726 755
23950417_peptide C2HC ZF 810 838
23950418_peptide C2HC ZF 726 755
23950419_peptide C2HC ZF 726 755

Links

Other C2HC ZF family TFs
Other Saccoglossus kowalevskii TFs

77 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
HMGB13 Arabidopsis thaliana AT4G11080 D 0.000
Gorai.007G025500 Gossypium raimondii Gorai.007G025500 I 0.000
Aquca_013_00142 Aquilegia coerulea Aquca_013_00142 I 0.000
Bostr.25463s0218 Boechera stricta Bostr.25463s0218 I 0.000
Bostr.7867s0182 Boechera stricta Bostr.7867s0182 I 0.000
Cagra.1226s0043 Capsella grandiflora Cagra.1226s0043 I 0.000
Cagra.3839s0003 Capsella grandiflora Cagra.3839s0003 I 0.000
Carubv10000930m.g Capsella rubella Carubv10000930m.g I 0.000
Carubv10007590m.g Capsella rubella Carubv10007590m.g I 0.000
Ciclev10023918m.g Citrus clementina Ciclev10023918m.g I 0.000
Eucgr.E00847 Eucalyptus grandis Eucgr.E00847 I 0.000
evm.TU.supercontig_122.41 Carica papaya evm.TU.supercontig_122.41 I 0.000
gene32050-v1.0-hybrid Fragaria vesca gene32050-v1.0-hybrid I 0.000
mgf015439m Mimulus guttatus mgf015439m I 0.000
Lus10001909.g Linum usitatissimum Lus10001909.g I 0.000
Lus10003904.g Linum usitatissimum Lus10003904.g I 0.000
Lus10032379.g Linum usitatissimum Lus10032379.g I 0.000
MDP0000268093 Malus domestica MDP0000268093 I 0.000
Pavir.Ab01026 Panicum virgatum Pavir.Ab01026 I 0.000
Pavir.J07596 Panicum virgatum Pavir.J07596 I 0.000
SapurV1A.0035s0680 Salix purpurea SapurV1A.0035s0680 I 0.000
Thhalv10025168m.g Eutrema salsugineum Thhalv10025168m.g I 0.000
Thhalv10028648m.g Eutrema salsugineum Thhalv10028648m.g I 0.000
PK10992.1 Cannabis sativa PK10992.1 I 0.000
chr4.CM0025.190.nd Lotus japonicus chr4.CM0025.190.nd I 0.000
POPTR_0003s13780 Populus trichocarpa POPTR_0003s13780 I 0.000
HMGB6 Arabidopsis thaliana AT4G23800 I 0.000
Bo1g037180 Brassica oleracea Bo1g037180 I 0.000
Bra013731 Brassica rapa Bra013731 I 0.000
Bra035256 Brassica rapa Bra035256 I 0.000
BRADI3G09690 Brachypodium distachyon BRADI3G09690 I 0.000
GLYMA05G37010 Glycine max GLYMA05G37010 I 0.000
MTR_8g099305 Medicago truncatula MTR_8g099305 I 0.000
PGSC0003DMG400012298 Solanum tuberosum PGSC0003DMG400012298 I 0.000
POPTR_0001s10410 Populus trichocarpa POPTR_0001s10410 I 0.000
Cucsa.107270 Cucumis sativus Cucsa.107270 I 0.000
PRUPE_ppa004611mg Prunus persica PRUPE_ppa004611mg I 0.000
Sb04g009610 Sorghum bicolor Sb04g009610 I 0.000
Si017040m.g Setaria italica Si017040m.g I 0.000
Solyc08g082070.2 Solanum lycopersicum Solyc08g082070.2 I 0.000
TCM_016416 Theobroma cacao TCM_016416 I 0.000
Traes_2AL_72F4E1905 Triticum aestivum Traes_2AL_72F4E1905 I 0.000
VIT_02s0025g01220 Vitis vinifera VIT_02s0025g01220 I 0.000
Ca_05811 Cicer arietinum Ca_05811 I 0.000
Cla011101 Citrullus lanatus Cla011101 I 0.000
Pm024077 Prunus mume Pm024077 I 0.000
30190.m010807 Ricinus communis 30190.m010807 I 0.000
Lus10033951.g Linum usitatissimum Lus10033951.g N 0.000
GLYMA08G02550 Glycine max GLYMA08G02550 N 0.000