CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
TET1
(
Callithrix jacchus
)
CxxC
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02008 (zf-CXXC)
IPR002857
ENSCJAG00000019005
T167886_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
TET1
M01914_2.00
Homo sapiens
NNHVCGHNN
NNDCGBDNN
PBM
Weirauch et al.(2014)
pTH9605
1.000
1.000
XP_001368961.2
M01917_2.00
Monodelphis domestica
SSGGGGGV
BCCCCCSS
PBM
Weirauch et al.(2014)
pTH9485
0.833
0.833
ENSMGAG00000004157_CONSTRUCT
M01920_2.00
PBM CONSTRUCTS
NNNNRVGBNN
NNVCBYNNNN
PBM
Weirauch et al.(2014)
pTH9719
0.762
0.762
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCJAP00000035341
CxxC
582
623
LEKKKRKRCGVCEPCQQKTNCGECTYCKNRKNSHQICKKRKC
Links
Other
CxxC
family TFs
Other
Callithrix jacchus
TFs
53 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AT5G05550
Arabidopsis thaliana
AT5G05550
D
AT3G58630
Arabidopsis thaliana
AT3G58630
D
VIT_12s0028g02150
Vitis vinifera
VIT_12s0028g02150
I
PK27986.1
Cannabis sativa
PK27986.1
I
Ca_00394
Cicer arietinum
Ca_00394
I
Cla009854
Citrullus lanatus
Cla009854
I
29814.m000741
Ricinus communis
29814.m000741
I
mgf000047m
Mimulus guttatus
mgf000047m
I
mgf006505m
Mimulus guttatus
mgf006505m
I
Aquca_021_00219
Aquilegia coerulea
Aquca_021_00219
I
Bostr.20903s0103
Boechera stricta
Bostr.20903s0103
I
Cagra.0686s0075
Capsella grandiflora
Cagra.0686s0075
I
Carubv10017646m.g
Capsella rubella
Carubv10017646m.g
I
Ciclev10016016m.g
Citrus clementina
Ciclev10016016m.g
I
Ciclev10033792m.g
Citrus clementina
Ciclev10033792m.g
I
evm.TU.supercontig_19.152
Carica papaya
evm.TU.supercontig_19.152
I
evm.TU.supercontig_7.72
Carica papaya
evm.TU.supercontig_7.72
I
gene29666-v1.0-hybrid
Fragaria vesca
gene29666-v1.0-hybrid
I
Gorai.011G039600
Gossypium raimondii
Gorai.011G039600
I
MDP0000301451
Malus domestica
MDP0000301451
I
orange1.1g021525m.g
Citrus sinensis
orange1.1g021525m.g
I
orange1.1g024563m.g
Citrus sinensis
orange1.1g024563m.g
I
SapurV1A.0045s0480
Salix purpurea
SapurV1A.0045s0480
I
SapurV1A.0260s0280
Salix purpurea
SapurV1A.0260s0280
I
SapurV1A.0650s0110
Salix purpurea
SapurV1A.0650s0110
I
Thhalv10006105m.g
Eutrema salsugineum
Thhalv10006105m.g
I
MTR_2g016140
Medicago truncatula
MTR_2g016140
I
Bo6g075950
Brassica oleracea
Bo6g075950
I
Bra003346
Brassica rapa
Bra003346
I
Bra034165
Brassica rapa
Bra034165
I
Bra034866
Brassica rapa
Bra034866
I
fgenesh2_kg.5__2307__AT3G58630.1
Arabidopsis lyrata
fgenesh2_kg.5__2307__AT3G58630.1
I
GLYMA13G30280
Glycine max
GLYMA13G30280
I
GLYMA15G08890
Glycine max
GLYMA15G08890
I
GSMUA_Achr1G11500_001
Musa acuminata
GSMUA_Achr1G11500_001
I
GSMUA_Achr1G27460_001
Musa acuminata
GSMUA_Achr1G27460_001
I
GSMUA_Achr5G09160_001
Musa acuminata
GSMUA_Achr5G09160_001
I
GSMUA_Achr9G04510_001
Musa acuminata
GSMUA_Achr9G04510_001
I
VIT_08s0058g00200
Vitis vinifera
VIT_08s0058g00200
I
PGSC0003DMG400007806
Solanum tuberosum
PGSC0003DMG400007806
I
PGSC0003DMG400010197
Solanum tuberosum
PGSC0003DMG400010197
I
PGSC0003DMG400030023
Solanum tuberosum
PGSC0003DMG400030023
I
POPTR_0001s08350
Populus trichocarpa
POPTR_0001s08350
I
POPTR_0003s11850
Populus trichocarpa
POPTR_0003s11850
I
POPTR_0008s07140
Populus trichocarpa
POPTR_0008s07140
I
PRUPE_ppa008833mg
Prunus persica
PRUPE_ppa008833mg
I
PRUPE_ppa009171mg
Prunus persica
PRUPE_ppa009171mg
I
Solyc06g051120.2
Solanum lycopersicum
Solyc06g051120.2
I
Solyc12g010890.1
Solanum lycopersicum
Solyc12g010890.1
I
TCM_029695
Theobroma cacao
TCM_029695
I
gene21007-v1.0-hybrid
Fragaria vesca
gene21007-v1.0-hybrid
N
MDP0000097759
Malus domestica
MDP0000097759
N
mgf001239m
Mimulus guttatus
mgf001239m
N
TCM_042467
Theobroma cacao
TCM_042467
N