Gorai.004G227800 (Gossypium raimondii)
EIN3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04873 (EIN3) IPR006957 Gorai.004G227800 T175358_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q9ZWK1_TOBAC
M10470_2.00 		Nicotiana tabacum
AGRTWCAT
ATGWAYCT		 Transfac
Matys et al.(2006)
P$TEIL_01 		0.919 0.919
EIN3
M00725_2.00 		Arabidopsis thaliana
NNRTDHAYNN
NNRTDHAYNN		 PBM
Chang et al.(2013)
pTH8729 		0.911 0.911
EIN3
M06878_2.00 		Arabidopsis thaliana
GDMYANRTWCAWTGH
DCAWTGWAYNTRKHC		 Dap-seq
OMalley et al.(2016)
EIN3_col_a 		0.911 0.911
EIN3
M06879_2.00 		Arabidopsis thaliana
RCCGTTR
YAACGGY		 Dap-seq
OMalley et al.(2016)
EIN3_colamp_a 		0.911 0.911
EIL1
M00724_2.00 		Arabidopsis thaliana
NNVRTDMRN
NYKHAYBNN		 PBM
Chang et al.(2013)
pTH7932 		0.894 0.894
e_gw1.87.73.1
M00726_2.00 		Physcomitrella patens
NNNRTDCDBN
NVHGHAYNNN		 PBM
Chang et al.(2013)
pTH8479 		0.850 0.850
EIL3
M00723_2.00 		Arabidopsis thaliana
NAGRTWCATNN
NNATGWAYCTN		 PBM
Chang et al.(2013)
pTH7933 		0.707 0.707
EIL3
M06877_2.00 		Arabidopsis thaliana
NYGTCYAGRTWCAWDNWHNHH
DDNDWNHWTGWAYCTRGACRN		 Dap-seq
OMalley et al.(2016)
EIL3_col_b 		0.707 0.707
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.004G227800.1 EIN3 48 295
Gorai.004G227800.2 EIN3 48 295

Links

Other EIN3 family TFs
Other Gossypium raimondii TFs

181 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
nhr-3 Caenorhabditis elegans WBGene00003602 D
nhr-7 Caenorhabditis elegans WBGene00003606 D
WUBG_08518 Wuchereria bancrofti WUBG_08518 I
WUBG_10752 Wuchereria bancrofti WUBG_10752 I
Bm12053 Brugia malayi Bm12053 I
Bm14724 Brugia malayi Bm14724 I
Bm2389 Brugia malayi Bm2389 I
Bm4894 Brugia malayi Bm4894 I
CBG06052 Caenorhabditis briggsae CBG06052 I
CBG07552 Caenorhabditis briggsae CBG07552 I
CBG15006 Caenorhabditis briggsae CBG15006 I
CBG17744 Caenorhabditis briggsae CBG17744 I
CBG19594 Caenorhabditis briggsae CBG19594 I
CBG19604 Caenorhabditis briggsae CBG19604 I
CBN07936 Caenorhabditis brenneri CBN07936 I
CBN08571 Caenorhabditis brenneri CBN08571 I
CBN10811 Caenorhabditis brenneri CBN10811 I
CBN13729 Caenorhabditis brenneri CBN13729 I
CBN18797 Caenorhabditis brenneri CBN18797 I
CBN19233 Caenorhabditis brenneri CBN19233 I
CBN20828 Caenorhabditis brenneri CBN20828 I
CBN26258 Caenorhabditis brenneri CBN26258 I
CBN31048 Caenorhabditis brenneri CBN31048 I
CJA08328 Caenorhabditis japonica CJA08328 I
CJA13646 Caenorhabditis japonica CJA13646 I
CRE02711 Caenorhabditis remanei CRE02711 I
CRE06661 Caenorhabditis remanei CRE06661 I
CRE06667 Caenorhabditis remanei CRE06667 I
CRE09911 Caenorhabditis remanei CRE09911 I
CRE10161 Caenorhabditis remanei CRE10161 I
CRE12779 Caenorhabditis remanei CRE12779 I
CRE14116 Caenorhabditis remanei CRE14116 I
CRE15289 Caenorhabditis remanei CRE15289 I
EFV54558 Trichinella spiralis EFV54558 I
LOAG_01074 Loa loa LOAG_01074 I
LOAG_05485 Loa loa LOAG_05485 I
LOAG_18352 Loa loa LOAG_18352 I
PPA20304 Pristionchus pacificus PPA20304 I
PPA21285 Pristionchus pacificus PPA21285 I
Ppa-nhr-31 Pristionchus pacificus PPA24219 I
nhr-31 Caenorhabditis elegans WBGene00003625 I
nhr-88 Caenorhabditis elegans WBGene00003678 I
nhr-119 Caenorhabditis elegans WBGene00003709 I
WBGene00241236 Onchocerca volvulus WBGene00241236 I
WBGene00241910 Onchocerca volvulus WBGene00241910 I
WBGene00248075 Onchocerca volvulus WBGene00248075 I
Minc01725 Meloidogyne incognita Minc01725 I
Minc13525 Meloidogyne incognita Minc13525 I
Minc15420 Meloidogyne incognita Minc15420 I
ACAC_0000239001 Angiostrongylus cantonensis ACAC_0000239001 I
ACAC_0000409401 Angiostrongylus cantonensis ACAC_0000409401 I
ACAC_0001180201 Angiostrongylus cantonensis ACAC_0001180201 I
ACOC_0001326501 Angiostrongylus costaricensis ACOC_0001326501 I
ANCCAN_03474 Ancylostoma caninum ANCCAN_03474 I
ANCCAN_12539 Ancylostoma caninum ANCCAN_12539 I
ANCCAN_18459 Ancylostoma caninum ANCCAN_18459 I
ANCCEY_03357 Ancylostoma ceylanicum ANCCEY_03357 I
ANCCEY_05105 Ancylostoma ceylanicum ANCCEY_05105 I
ASIM_0001301101 Anisakis simplex ASIM_0001301101 I
ASIM_0001309901 Anisakis simplex ASIM_0001309901 I
ASIM_0001589901 Anisakis simplex ASIM_0001589901 I
ASU_01199 Ascaris suum ASU_01199 I
ASU_04305 Ascaris suum ASU_04305 I
ASU_10946 Ascaris suum ASU_10946 I
BTMF_0000273701 Brugia timori BTMF_0000273701 I
BTMF_0001198801 Brugia timori BTMF_0001198801 I
BXY_0008800 Bursaphelenchus xylophilus BXY_0008800 I
BXY_0011200 Bursaphelenchus xylophilus BXY_0011200 I
BXY_0179600 Bursaphelenchus xylophilus BXY_0179600 I
BXY_0740100 Bursaphelenchus xylophilus BXY_0740100 I
BXY_1595900 Bursaphelenchus xylophilus BXY_1595900 I
BXY_1600300 Bursaphelenchus xylophilus BXY_1600300 I
D917_06779 Trichinella nativa D917_06779 I
DICVIV_02348 Dictyocaulus viviparus DICVIV_02348 I
DICVIV_10822 Dictyocaulus viviparus DICVIV_10822 I
DICVIV_11945 Dictyocaulus viviparus DICVIV_11945 I
DME_0000188101 Dracunculus medinensis DME_0000188101 I
DME_0000742401 Dracunculus medinensis DME_0000742401 I
DME_0000960901 Dracunculus medinensis DME_0000960901 I
EVEC_0001115901 Enterobius vermicularis EVEC_0001115901 I
GPLIN_000268400 Globodera pallida GPLIN_000268400 I
GPLIN_000669000 Globodera pallida GPLIN_000669000 I
GPLIN_001106000 Globodera pallida GPLIN_001106000 I
GPUH_0000393501 Gongylonema pulchrum GPUH_0000393501 I
Hba_06510 Heterorhabditis bacteriophora Hba_06510 I
Hba_14163 Heterorhabditis bacteriophora Hba_14163 I
Hba_14958 Heterorhabditis bacteriophora Hba_14958 I
HCOI00435200 Haemonchus contortus HCOI00435200 I
HCOI00769300 Haemonchus contortus HCOI00769300 I
HCOI01268300 Haemonchus contortus HCOI01268300 I
HCOI01406200 Haemonchus contortus HCOI01406200 I
HCOI01716000 Haemonchus contortus HCOI01716000 I
HCOI02077900 Haemonchus contortus HCOI02077900 I
HPBE_0001043101 Heligmosomoides bakeri HPBE_0001043101 I
HPLM_0001092501 Haemonchus placei HPLM_0001092501 I
HPLM_0001680701 Haemonchus placei HPLM_0001680701 I
L596_g11035 Steinernema carpocapsae L596_g11035 I
L596_g20569 Steinernema carpocapsae L596_g20569 I
L596_g25297 Steinernema carpocapsae L596_g25297 I
L596_g25666 Steinernema carpocapsae L596_g25666 I
L596_g27086 Steinernema carpocapsae L596_g27086 I
L596_g3809 Steinernema carpocapsae L596_g3809 I
L889_g29204 Steinernema feltiae L889_g29204 I
L889_g5777 Steinernema feltiae L889_g5777 I
L889_g8361 Steinernema feltiae L889_g8361 I
L889_g8621 Steinernema feltiae L889_g8621 I
L892_g19201 Steinernema scapterisci L892_g19201 I
L892_g650 Steinernema scapterisci L892_g650 I
L893_g13285 Steinernema glaseri L893_g13285 I
L893_g27201 Steinernema glaseri L893_g27201 I
L893_g29388 Steinernema glaseri L893_g29388 I
L893_g29555 Steinernema glaseri L893_g29555 I
L893_g6878 Steinernema glaseri L893_g6878 I
L898_g10316 Steinernema monticolum L898_g10316 I
L898_g24498 Steinernema monticolum L898_g24498 I
L898_g2799 Steinernema monticolum L898_g2799 I
L898_g4801 Steinernema monticolum L898_g4801 I
maker-nMf.1.1.scaf07948-snap-gene-0.4 Meloidogyne floridensis maker-nMf.1.1.scaf07948-snap-gene-0.4 I
MhA1_Contig217.frz3.gene7 Meloidogyne hapla MhA1_Contig217.frz3.gene7 I
MhA1_Contig984.frz3.gene20 Meloidogyne hapla MhA1_Contig984.frz3.gene20 I
nAv.1.0.1.g01698 Acanthocheilonema viteae nAv.1.0.1.g01698 I
nAv.1.0.1.g09896 Acanthocheilonema viteae nAv.1.0.1.g09896 I
NBR_0000170601 Nippostrongylus brasiliensis NBR_0000170601 I
NBR_0001013001 Nippostrongylus brasiliensis NBR_0001013001 I
NBR_0001432001 Nippostrongylus brasiliensis NBR_0001432001 I
nDi.2.2.2.g02781 Dirofilaria immitis nDi.2.2.2.g02781 I
nDi.2.2.2.g03563 Dirofilaria immitis nDi.2.2.2.g03563 I
nDi.2.2.2.g05078 Dirofilaria immitis nDi.2.2.2.g05078 I
NECAME_04545 Necator americanus NECAME_04545 I
NECAME_05125 Necator americanus NECAME_05125 I
NECAME_12696 Necator americanus NECAME_12696 I
nLs.2.1.2.g05858 Litomosoides sigmodontis nLs.2.1.2.g05858 I
nLs.2.1.2.g08709 Litomosoides sigmodontis nLs.2.1.2.g08709 I
nOo.2.0.1.g04046 Onchocerca ochengi nOo.2.0.1.g04046 I
nOo.2.0.1.g05901 Onchocerca ochengi nOo.2.0.1.g05901 I
nRc.2.0.1.g00257 Romanomermis culicivorax nRc.2.0.1.g00257 I
OESDEN_02652 Oesophagostomum dentatum OESDEN_02652 I
OESDEN_02943 Oesophagostomum dentatum OESDEN_02943 I
OESDEN_12257 Oesophagostomum dentatum OESDEN_12257 I
OESDEN_17109 Oesophagostomum dentatum OESDEN_17109 I
OFLC_0000776201 Onchocerca flexuosa OFLC_0000776201 I
OFLC_0001511801 Onchocerca flexuosa OFLC_0001511801 I
PEQ_0000633601 Parascaris equorum PEQ_0000633601 I
PTRK_0000207700 Parastrongyloides trichosuri PTRK_0000207700 I
PTRK_0000497300 Parastrongyloides trichosuri PTRK_0000497300 I
PTRK_0000510500 Parastrongyloides trichosuri PTRK_0000510500 I
PTRK_0000775900 Parastrongyloides trichosuri PTRK_0000775900 I
PTRK_0000785300 Parastrongyloides trichosuri PTRK_0000785300 I
RSKR_0000832300 Rhabditophanes kr3021 RSKR_0000832300 I
SBAD_0000391501 Soboliphyme baturini SBAD_0000391501 I
scaffold51-EXSNAP2012.23 Pristionchus exspectatus scaffold51-EXSNAP2012.23 I
scaffold601-EXSNAP2012.19 Pristionchus exspectatus scaffold601-EXSNAP2012.19 I
scaffold605-EXSNAP2012.9 Pristionchus exspectatus scaffold605-EXSNAP2012.9 I
SMUV_0000212501 Syphacia muris SMUV_0000212501 I
SMUV_0000428701 Syphacia muris SMUV_0000428701 I
SMUV_0000859101 Syphacia muris SMUV_0000859101 I
snap_masked-nMf.1.1.scaf18837-processed-gene-0.2 Meloidogyne floridensis snap_masked-nMf.1.1.scaf18837-processed-gene-0.2 I
snap_masked-nMf.1.1.scaf24311-processed-gene-0.3 Meloidogyne floridensis snap_masked-nMf.1.1.scaf24311-processed-gene-0.3 I
SPAL_0000110800 Strongyloides papillosus SPAL_0000110800 I
SPAL_0000620000 Strongyloides papillosus SPAL_0000620000 I
SPAL_0001157400 Strongyloides papillosus SPAL_0001157400 I
SPAL_0001436300 Strongyloides papillosus SPAL_0001436300 I
SPAL_0001690000 Strongyloides papillosus SPAL_0001690000 I
SSTP_0000217700 Strongyloides stercoralis SSTP_0000217700 I
SSTP_0000433200 Strongyloides stercoralis SSTP_0000433200 I
SSTP_0000662400 Strongyloides stercoralis SSTP_0000662400 I
SSTP_0000831700 Strongyloides stercoralis SSTP_0000831700 I
SSTP_0001234400 Strongyloides stercoralis SSTP_0001234400 I
SVE_0137800 Strongyloides venezuelensis SVE_0137800 I
SVE_0301400 Strongyloides venezuelensis SVE_0301400 I
SVE_0662100 Strongyloides venezuelensis SVE_0662100 I
SVE_1633700 Strongyloides venezuelensis SVE_1633700 I
SVE_1965700 Strongyloides venezuelensis SVE_1965700 I
TCLT_0000079701 Thelazia callipaeda TCLT_0000079701 I
TCLT_0000173501 Thelazia callipaeda TCLT_0000173501 I
TCNE_0001780601 Toxocara canis TCNE_0001780601 I
TELCIR_01879 Teladorsagia circumcincta TELCIR_01879 I
TELCIR_05080 Teladorsagia circumcincta TELCIR_05080 I
TELCIR_07363 Teladorsagia circumcincta TELCIR_07363 I
TMUE_s0002006800 Trichuris muris TMUE_s0002006800 I
CBG01439 Caenorhabditis briggsae CBG01439 N
CJA03362 Caenorhabditis japonica CJA03362 N
nhr-97 Caenorhabditis elegans WBGene00003687 N
ANCCAN_09370 Ancylostoma caninum ANCCAN_09370 N
ASIM_0000041701 Anisakis simplex ASIM_0000041701 N
augustus_masked-nMf.1.1.scaf06891-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf06891-processed-gene-0.0 N
HCOI00878400 Haemonchus contortus HCOI00878400 N
HCOI02063000 Haemonchus contortus HCOI02063000 N
HCOI02063200 Haemonchus contortus HCOI02063200 N
HCOI02063400 Haemonchus contortus HCOI02063400 N
HCOI02063800 Haemonchus contortus HCOI02063800 N
HCOI02064100 Haemonchus contortus HCOI02064100 N
nOo.2.0.1.g02048 Onchocerca ochengi nOo.2.0.1.g02048 N
RSKR_0000862400 Rhabditophanes kr3021 RSKR_0000862400 N
RSKR_0000868400 Rhabditophanes kr3021 RSKR_0000868400 N
TCNE_0000088101 Toxocara canis TCNE_0000088101 N