MTR_4g121110 (Medicago truncatula)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00320 (GATA) IPR000679 MTR_4g121110 T194205_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA16
M06897_2.00 		Arabidopsis thaliana
ATGATGATGATSATGATGATGATSATG
CATSATCATCATCATSATCATCATCAT		 Dap-seq
OMalley et al.(2016)
GATA16_col_a 		0.841 0.889
GATA15
M01997_2.00 		Arabidopsis thaliana
NNHGATCNN
NNGATCDNN		 PBM
Weirauch et al.(2014)
pTH7662 		0.821 0.889
GATA15
M06886_2.00 		Arabidopsis thaliana
GATGATGATGATGATGATS
SATCATCATCATCATCATC		 Dap-seq
OMalley et al.(2016)
GATA15_col_b 		0.821 0.889
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
KEH32333 GATA 32 67

Links

Other GATA family TFs
Other Medicago truncatula TFs

143 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
HMGB13 Arabidopsis thaliana AT4G11080 D
mgf015439m Mimulus guttatus mgf015439m I
Cucsa.107270 Cucumis sativus Cucsa.107270 I
Aquca_013_00142 Aquilegia coerulea Aquca_013_00142 I
Bostr.25463s0218 Boechera stricta Bostr.25463s0218 I
Bostr.7867s0182 Boechera stricta Bostr.7867s0182 I
Cagra.1226s0043 Capsella grandiflora Cagra.1226s0043 I
Cagra.3839s0003 Capsella grandiflora Cagra.3839s0003 I
Carubv10000930m.g Capsella rubella Carubv10000930m.g I
Carubv10007590m.g Capsella rubella Carubv10007590m.g I
Ciclev10023918m.g Citrus clementina Ciclev10023918m.g I
Eucgr.E00847 Eucalyptus grandis Eucgr.E00847 I
evm.TU.supercontig_122.41 Carica papaya evm.TU.supercontig_122.41 I
Gorai.007G025500 Gossypium raimondii Gorai.007G025500 I
Lus10001909.g Linum usitatissimum Lus10001909.g I
Lus10003904.g Linum usitatissimum Lus10003904.g I
Lus10032379.g Linum usitatissimum Lus10032379.g I
MDP0000268093 Malus domestica MDP0000268093 I
Pavir.Ab01026 Panicum virgatum Pavir.Ab01026 I
Pavir.J07596 Panicum virgatum Pavir.J07596 I
SapurV1A.0035s0680 Salix purpurea SapurV1A.0035s0680 I
Thhalv10025168m.g Eutrema salsugineum Thhalv10025168m.g I
Thhalv10028648m.g Eutrema salsugineum Thhalv10028648m.g I
PK10992.1 Cannabis sativa PK10992.1 I
chr4.CM0025.190.nd Lotus japonicus chr4.CM0025.190.nd I
30190.m010807 Ricinus communis 30190.m010807 I
HMGB6 Arabidopsis thaliana AT4G23800 I
Bo1g037180 Brassica oleracea Bo1g037180 I
Bra013731 Brassica rapa Bra013731 I
Bra035256 Brassica rapa Bra035256 I
fgenesh2_kg.6__3081__AT4G11080.1 Arabidopsis lyrata fgenesh2_kg.6__3081__AT4G11080.1 I
GLYMA05G37010 Glycine max GLYMA05G37010 I
GRMZM2G060253 Zea mays GRMZM2G060253 I
GSMUA_Achr6G14260_001 Musa acuminata GSMUA_Achr6G14260_001 I
MTR_8g099305 Medicago truncatula MTR_8g099305 I
PGSC0003DMG400012298 Solanum tuberosum PGSC0003DMG400012298 I
POPTR_0001s10410 Populus trichocarpa POPTR_0001s10410 I
POPTR_0003s13780 Populus trichocarpa POPTR_0003s13780 I
PRUPE_ppa004611mg Prunus persica PRUPE_ppa004611mg I
Sb04g009610 Sorghum bicolor Sb04g009610 I
Solyc08g082070.2 Solanum lycopersicum Solyc08g082070.2 I
TCM_016416 Theobroma cacao TCM_016416 I
VIT_02s0025g01220 Vitis vinifera VIT_02s0025g01220 I
Ca_05811 Cicer arietinum Ca_05811 I
Cla011101 Citrullus lanatus Cla011101 I
Pm024077 Prunus mume Pm024077 I
GLYMA08G02550 Glycine max GLYMA08G02550 N
AMTR_s00093p00057150 Amborella trichopoda AMTR_s00093p00057150 N
PDK_20s1767201g001 Phoenix dactylifera PDK_20s1767201g001 N