CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MLOC_72117
(
Hordeum vulgare
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
MLOC_72117
T200496_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MLOC_72117.1
GRAS
254
622
SRQLLSEAAVAIADGNFETAAANLATLKRAANPRGDAEHRLVAMMVAVLSSRIVPTASASSQHLADLCSAEHHTGCQLLHDITPCFRLALDAANIAIVEAVAGHRAVHLVDFDINAPQHAILIQRLADRRVPGTSLQVTAVTDPTSPFTQSLTATLPGVGERLKKLAERAGIEYSFRIVSCRAAEIEASKLGCEPGEALAVNLAFALSHVPDESVSPANPRDELLRRVRALGPQIVTLVEQELNSNTAPLATRFSDACLHYGAILDSLDSTVSRESADRARAEEAVANMSANAVGREGADRLERCEVFGKWRARFGMAGFRPVALAAGIADQVMARVGAPPPGLVVKPENGVLRLGWKGRVVTVASAWR
MLOC_72117.2
GRAS
32
344
RLHLRLGANCPSCRTWRSSCSLLHDITPCFRLALDAANIAIVEAVAGHRAVHLVDFDINAPQHAILIQRLADRRVPGTSLQVTAVTDPTSPFTQSLTATLPGVGERLKKLAERAGIEYSFRIVSCRAAEIEASKLGCEPGEALAVNLAFALSHVPDESVSPANPRDELLRRVRALGPQIVTLVEQELNSNTAPLATRFSDACLHYGAILDSLDSTVSRESADRARAEEAVANMSANAVGREGADRLERCEVFGKWRARFGMAGFRPVALAAGIADQVMARVGAPPPGLVVKPENGVLRLGWKGRVVTVASAWR
Links
Other
GRAS
family TFs
Other
Hordeum vulgare
TFs
29 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Eucgr.E03895
Eucalyptus grandis
Eucgr.E03895
N
0.000
Lus10000539.g
Linum usitatissimum
Lus10000539.g
N
0.000
Gorai.010G249400
Gossypium raimondii
Gorai.010G249400
N
0.000
Gorai.009G184100
Gossypium raimondii
Gorai.009G184100
N
0.000
Gorai.007G167000
Gossypium raimondii
Gorai.007G167000
N
0.000
Gorai.001G192800
Gossypium raimondii
Gorai.001G192800
N
0.000
gene21592-v1.0-hybrid
Fragaria vesca
gene21592-v1.0-hybrid
N
0.000
gene03551-v1.0-hybrid
Fragaria vesca
gene03551-v1.0-hybrid
N
0.000
evm.TU.supercontig_27.254
Carica papaya
evm.TU.supercontig_27.254
N
0.000
evm.TU.supercontig_136.17
Carica papaya
evm.TU.supercontig_136.17
N
0.000
Lus10006369.g
Linum usitatissimum
Lus10006369.g
N
0.000
Eucgr.D01435
Eucalyptus grandis
Eucgr.D01435
N
0.000
Eucgr.A01051
Eucalyptus grandis
Eucgr.A01051
N
0.000
Ciclev10014845m.g
Citrus clementina
Ciclev10014845m.g
N
0.000
Ciclev10014811m.g
Citrus clementina
Ciclev10014811m.g
N
0.000
Aquca_028_00248
Aquilegia coerulea
Aquca_028_00248
N
0.000
Aquca_005_00234
Aquilegia coerulea
Aquca_005_00234
N
0.000
mgf007403m
Mimulus guttatus
mgf007403m
N
0.000
Cucsa.120390
Cucumis sativus
Cucsa.120390
N
0.000
orange1.1g009376m.g
Citrus sinensis
orange1.1g009376m.g
N
0.000
PDK_20s1411471g003
Phoenix dactylifera
PDK_20s1411471g003
N
0.000
chr6.LjT16B20.120.nc
Lotus japonicus
chr6.LjT16B20.120.nc
N
0.000
chr4.CM0288.500.nc
Lotus japonicus
chr4.CM0288.500.nc
N
0.000
PK09018.1
Cannabis sativa
PK09018.1
N
0.000
PK04573.1
Cannabis sativa
PK04573.1
N
0.000
SapurV1A.0823s0110
Salix purpurea
SapurV1A.0823s0110
N
0.000
SapurV1A.0359s0250
Salix purpurea
SapurV1A.0359s0250
N
0.000
SapurV1A.0054s0160
Salix purpurea
SapurV1A.0054s0160
N
0.000
Cucsa.044690
Cucumis sativus
Cucsa.044690
N
0.000
orange1.1g008984m.g
Citrus sinensis
orange1.1g008984m.g
N
0.000
MDP0000804652
Malus domestica
MDP0000804652
N
0.000
MDP0000284679
Malus domestica
MDP0000284679
N
0.000
MDP0000254936
Malus domestica
MDP0000254936
N
0.000
MDP0000205236
Malus domestica
MDP0000205236
N
0.000
MDP0000152670
Malus domestica
MDP0000152670
N
0.000
Lus10017554.g
Linum usitatissimum
Lus10017554.g
N
0.000
Lus10012323.g
Linum usitatissimum
Lus10012323.g
N
0.000
PGSC0003DMG400008442
Solanum tuberosum
PGSC0003DMG400008442
N
0.000
Solyc07g047950.1
Solanum lycopersicum
Solyc07g047950.1
N
0.000
Solyc04g014830.1
Solanum lycopersicum
Solyc04g014830.1
N
0.000
PRUPE_ppa003910mg
Prunus persica
PRUPE_ppa003910mg
N
0.000
PRUPE_ppa003702mg
Prunus persica
PRUPE_ppa003702mg
N
0.000
POPTR_0016s01110
Populus trichocarpa
POPTR_0016s01110
N
0.000
POPTR_0014s16230
Populus trichocarpa
POPTR_0014s16230
N
0.000
POPTR_0006s01720
Populus trichocarpa
POPTR_0006s01720
N
0.000
PGSC0003DMG400023556
Solanum tuberosum
PGSC0003DMG400023556
N
0.000
PGSC0003DMG400013356
Solanum tuberosum
PGSC0003DMG400013356
N
0.000
Solyc11g012510.1
Solanum lycopersicum
Solyc11g012510.1
N
0.000
PGSC0003DMG400006132
Solanum tuberosum
PGSC0003DMG400006132
N
0.000
OMERI10G05450
Oryza meridionalis
OMERI10G05450
N
0.000
MTR_5g097480
Medicago truncatula
MTR_5g097480
N
0.000
GLYMA17G01150
Glycine max
GLYMA17G01150
N
0.000
GLYMA15G12320
Glycine max
GLYMA15G12320
N
0.000
GLYMA14G01020
Glycine max
GLYMA14G01020
N
0.000
GLYMA09G01440
Glycine max
GLYMA09G01440
N
0.000
GLYMA07G39650
Glycine max
GLYMA07G39650
N
0.000
Pm012019
Prunus mume
Pm012019
N
0.000
cassava34699.m1
Manihot esculenta
cassava34699.m1
N
0.000
cassava34106.m1
Manihot esculenta
cassava34106.m1
N
0.000
cassava10826.m1
Manihot esculenta
cassava10826.m1
N
0.000
29949.m000124
Ricinus communis
29949.m000124
N
0.000
27613.m000642
Ricinus communis
27613.m000642
N
0.000
27529.m000047
Ricinus communis
27529.m000047
N
0.000
Pm015021
Prunus mume
Pm015021
N
0.000
Pm012494
Prunus mume
Pm012494
N
0.000
GLYMA02G47640
Glycine max
GLYMA02G47640
N
0.000
Cla014623
Citrullus lanatus
Cla014623
N
0.000
Cla001429
Citrullus lanatus
Cla001429
N
0.000
Ca_20223
Cicer arietinum
Ca_20223
N
0.000
Ca_09786
Cicer arietinum
Ca_09786
N
0.000
VIT_12s0057g00560
Vitis vinifera
VIT_12s0057g00560
N
0.000
TCM_030733
Theobroma cacao
TCM_030733
N
0.000
TCM_030393
Theobroma cacao
TCM_030393
N
0.000
TCM_002319
Theobroma cacao
TCM_002319
N
0.000