Pm029840 (Prunus mume)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 Pm029840 T201990_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pm029840 GRAS 44 456

Links

Other GRAS family TFs
Other Prunus mume TFs

49 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Lus10024177.g Linum usitatissimum Lus10024177.g N 0.779
Aquca_014_00674 Aquilegia coerulea Aquca_014_00674 N 0.781
Ciclev10015219m.g Citrus clementina Ciclev10015219m.g N 0.755
Ciclev10031389m.g Citrus clementina Ciclev10031389m.g N 0.792
Eucgr.B03716 Eucalyptus grandis Eucgr.B03716 N 0.704
Eucgr.G03258 Eucalyptus grandis Eucgr.G03258 N 0.781
evm.TU.supercontig_197.7 Carica papaya evm.TU.supercontig_197.7 N 0.801
evm.TU.supercontig_84.12 Carica papaya evm.TU.supercontig_84.12 N 0.753
gene14438-v1.0-hybrid Fragaria vesca gene14438-v1.0-hybrid N 0.823
Gorai.006G125700 Gossypium raimondii Gorai.006G125700 N 0.767
Gorai.012G080500 Gossypium raimondii Gorai.012G080500 N 0.805
Gorai.013G015100 Gossypium raimondii Gorai.013G015100 N 0.812
Lus10019773.g Linum usitatissimum Lus10019773.g N 0.729
Cucsa.308180 Cucumis sativus Cucsa.308180 N 0.755
Lus10039562.g Linum usitatissimum Lus10039562.g N 0.774
orange1.1g011736m.g Citrus sinensis orange1.1g011736m.g N 0.796
orange1.1g014413m.g Citrus sinensis orange1.1g014413m.g N 0.755
SapurV1A.0009s0760 Salix purpurea SapurV1A.0009s0760 N 0.782
SapurV1A.0415s0050 Salix purpurea SapurV1A.0415s0050 N 0.732
SapurV1A.0504s0280 Salix purpurea SapurV1A.0504s0280 N 0.766
SapurV1A.1723s0080 Salix purpurea SapurV1A.1723s0080 N 0.780
PK02707.1 Cannabis sativa PK02707.1 N 0.803
chr2.CM0018.90.nc Lotus japonicus chr2.CM0018.90.nc N 0.721
chr3.CM0460.90.nd Lotus japonicus chr3.CM0460.90.nd N 0.710
PDK_20s1303935g001 Phoenix dactylifera PDK_20s1303935g001 N 0.755
Ca_11133 Cicer arietinum Ca_11133 N 0.721
PGSC0003DMG400004649 Solanum tuberosum PGSC0003DMG400004649 N 0.726
POPTR_0001s06090 Populus trichocarpa POPTR_0001s06090 N 0.782
POPTR_0003s20100 Populus trichocarpa POPTR_0003s20100 N 0.771
SCL3 Populus trichocarpa POPTR_0009s05330 N 0.748
PRUPE_ppa005243mg Prunus persica PRUPE_ppa005243mg N 0.733
PRUPE_ppa005439mg Prunus persica PRUPE_ppa005439mg N 1.000
Solyc12g099900.1 Solanum lycopersicum Solyc12g099900.1 N 0.723
TCM_040833 Theobroma cacao TCM_040833 N 0.781
TCM_042392 Theobroma cacao TCM_042392 N 0.815
SCL3 Vitis vinifera VIT_06s0009g02390 N 0.759
VIT_13s0019g01220 Vitis vinifera VIT_13s0019g01220 N 0.798
MTR_5g009080 Medicago truncatula MTR_5g009080 N 0.723
Ca_27441 Cicer arietinum Ca_27441 N 0.726
Cla020893 Citrullus lanatus Cla020893 N 0.751
Pm012190 Prunus mume Pm012190 N 0.736
Pm016466 Prunus mume Pm016466 N 1.000
30024.m001746 Ricinus communis 30024.m001746 N 0.732
30131.m007244 Ricinus communis 30131.m007244 N 0.804
cassava1375.valid.m1 Manihot esculenta cassava1375.valid.m1 N 0.807
cassava1376.valid.m1 Manihot esculenta cassava1376.valid.m1 N 0.807
cassava13860.valid.m1 Manihot esculenta cassava13860.valid.m1 N 0.737
cassava20989.m1 Manihot esculenta cassava20989.m1 N 0.783
cassava31043.valid.m1 Manihot esculenta cassava31043.valid.m1 N 0.717