Bostr.2983s0116 (Boechera stricta)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Bostr.2983s0116 T228140_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK25011.1
M01253_2.00 		Cannabis sativa
NNWYRMDBNN
NNVHKYRWNN		 PBM
Lambert et al.(2019)
pTH11258 		0.817 0.842
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.2983s0116.1.p Homeodomain 20 76

Links

Other Homeodomain family TFs
Other Boechera stricta TFs

37 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PK25011.1 Cannabis sativa PK25011.1 D 0.817
Gorai.004G014700 Gossypium raimondii Gorai.004G014700 I 0.599
Cucsa.087050 Cucumis sativus Cucsa.087050 I 0.643
fgenesh1_pg.scaffold_15000027 Physcomitrella patens fgenesh1_pg.scaffold_15000027 I 0.607
mgf007720m Mimulus guttatus mgf007720m I 0.640
Aquca_014_00610 Aquilegia coerulea Aquca_014_00610 I 0.660
Cagra.2552s0003 Capsella grandiflora Cagra.2552s0003 I 0.728
Carubv10002996m.g Capsella rubella Carubv10002996m.g I 0.728
Ciclev10014928m.g Citrus clementina Ciclev10014928m.g I 0.757
Eucgr.J00701 Eucalyptus grandis Eucgr.J00701 I 0.723
Gorai.001G134800 Gossypium raimondii Gorai.001G134800 I 0.604
Cla008712 Citrullus lanatus Cla008712 I 0.632
MDP0000207866 Malus domestica MDP0000207866 I 0.632
orange1.1g010311m.g Citrus sinensis orange1.1g010311m.g I 0.757
SapurV1A.0042s0570 Salix purpurea SapurV1A.0042s0570 I 0.620
SapurV1A.0106s0340 Salix purpurea SapurV1A.0106s0340 I 0.619
Thhalv10028592m.g Eutrema salsugineum Thhalv10028592m.g I 0.681
PDK_20s1402391g002 Phoenix dactylifera PDK_20s1402391g002 I 0.611
PDK_20s1551001g001 Phoenix dactylifera PDK_20s1551001g001 I 0.611
Ca_21400 Cicer arietinum Ca_21400 I 0.607
Bo9g006450 Brassica oleracea Bo9g006450 I 0.723
Bra034196 Brassica rapa Bra034196 I 0.723
GLYMA02G44910 Glycine max GLYMA02G44910 I 0.644
GLYMA04G15260 Glycine max GLYMA04G15260 I 0.644
GLYMA08G41330 Glycine max GLYMA08G41330 I 0.754
GLYMA14G03850 Glycine max GLYMA14G03850 I 0.644
GLYMA18G14910 Glycine max GLYMA18G14910 I 0.754
MTR_3g045830 Medicago truncatula MTR_3g045830 I 0.611
PGSC0003DMG400004714 Solanum tuberosum PGSC0003DMG400004714 I 0.619
POPTR_0001s28350 Populus trichocarpa POPTR_0001s28350 I 0.620
POPTR_0009s07600 Populus trichocarpa POPTR_0009s07600 I 0.620
PRUPE_ppa005223mg Prunus persica PRUPE_ppa005223mg I 0.629
Solyc12g099760.1 Solanum lycopersicum Solyc12g099760.1 I 0.606
TCM_040945 Theobroma cacao TCM_040945 I 0.630
VIT_06s0009g03530 Vitis vinifera VIT_06s0009g03530 I 0.811
AT4G03250 Arabidopsis thaliana AT4G03250 I 0.722
MTR_5g089870 Medicago truncatula MTR_5g089870 N 0.604