Lus10025406.g (Linum usitatissimum)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 Lus10025406.g T250744_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10025406 MADF 40 121

Links

Other MADF family TFs
Other Linum usitatissimum TFs

59 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
mgf006505m Mimulus guttatus mgf006505m I 0.864
BGIOSGA020349 Oryza indica BGIOSGA020349 I 0.890
VIT_08s0058g00200 Vitis vinifera VIT_08s0058g00200 I 0.828
VIT_10s0003g01300 Vitis vinifera VIT_10s0003g01300 I 0.869
VIT_12s0028g02150 Vitis vinifera VIT_12s0028g02150 I 0.824
Ca_00394 Cicer arietinum Ca_00394 I 0.864
Ca_19877 Cicer arietinum Ca_19877 I 0.857
Cla009854 Citrullus lanatus Cla009854 I 0.851
Cla019967 Citrullus lanatus Cla019967 I 0.925
29900.m001628 Ricinus communis 29900.m001628 I 0.902
cassava21220.m1 Manihot esculenta cassava21220.m1 I 0.902
cassava2218.valid.m1 Manihot esculenta cassava2218.valid.m1 I 0.902
Cucsa.213110 Cucumis sativus Cucsa.213110 I 0.925
Cucsa.213120 Cucumis sativus Cucsa.213120 I 0.925
mgf000047m Mimulus guttatus mgf000047m I 0.834
TCM_029695 Theobroma cacao TCM_029695 I 0.864
Ciclev10016016m.g Citrus clementina Ciclev10016016m.g I 0.864
evm.TU.supercontig_7.72 Carica papaya evm.TU.supercontig_7.72 I 0.840
gene29666-v1.0-hybrid Fragaria vesca gene29666-v1.0-hybrid I 0.847
Gorai.011G039600 Gossypium raimondii Gorai.011G039600 I 0.865
Lus10015282.g Linum usitatissimum Lus10015282.g I 0.963
Lus10025404.g Linum usitatissimum Lus10025404.g I 0.963
MDP0000301451 Malus domestica MDP0000301451 I 0.840
orange1.1g021525m.g Citrus sinensis orange1.1g021525m.g I 0.864
Pavir.J11649 Panicum virgatum Pavir.J11649 I 0.879
Pavir.J33948 Panicum virgatum Pavir.J33948 I 0.879
SapurV1A.0260s0280 Salix purpurea SapurV1A.0260s0280 I 0.864
PK27986.1 Cannabis sativa PK27986.1 I 0.864
LjSGA_058481.1 Lotus japonicus LjSGA_058481.1 I 0.869
MTR_4g079960 Medicago truncatula MTR_4g079960 I 0.815
BGIOSGA020351 Oryza indica BGIOSGA020351 I 0.890
BRADI2G16780 Brachypodium distachyon BRADI2G16780 I 0.868
GLYMA13G30280 Glycine max GLYMA13G30280 I 0.864
GLYMA15G08890 Glycine max GLYMA15G08890 I 0.864
GRMZM2G157219 Zea mays GRMZM2G157219 I 0.879
GSMUA_Achr1G11500_001 Musa acuminata GSMUA_Achr1G11500_001 I 0.852
GSMUA_Achr1G27460_001 Musa acuminata GSMUA_Achr1G27460_001 I 0.838
GSMUA_Achr5G09160_001 Musa acuminata GSMUA_Achr5G09160_001 I 0.840
GSMUA_Achr6G26840_001 Musa acuminata GSMUA_Achr6G26840_001 I 0.818
GSMUA_Achr9G06410_001 Musa acuminata GSMUA_Achr9G06410_001 I 0.838
MTR_2g016140 Medicago truncatula MTR_2g016140 I 0.864
Si022565m.g Setaria italica Si022565m.g I 0.879
OBART05G25610 Oryza barthii OBART05G25610 I 0.890
OGLUM05G27260 Oryza glumaepatula OGLUM05G27260 I 0.890
OMERI02G35600 Oryza meridionalis OMERI02G35600 I 0.890
ONIVA05G26860 Oryza nivara ONIVA05G26860 I 0.890
OPUNC05G23220 Oryza punctata OPUNC05G23220 I 0.878
ORGLA05G0221200 Oryza glaberrima ORGLA05G0221200 I 0.890
ORUFI05G27490 Oryza rufipogon ORUFI05G27490 I 0.890
OS05G0560600 Oryza sativa OS05G0560600 I 0.890
POPTR_0001s08350 Populus trichocarpa POPTR_0001s08350 I 0.869
PRUPE_ppa008833mg Prunus persica PRUPE_ppa008833mg I 0.828
PRUPE_ppa009171mg Prunus persica PRUPE_ppa009171mg I 0.867
Sb09g028350 Sorghum bicolor Sb09g028350 I 0.864
LPERR01G22430 Leersia perrieri LPERR01G22430 N 0.826
OPUNC01G26130 Oryza punctata OPUNC01G26130 N 0.826
Lus10007273.g Linum usitatissimum Lus10007273.g N 0.946
BRADI2G46320 Brachypodium distachyon BRADI2G46320 N 0.841
TRAES3BF009800030CFD_g Triticum aestivum TRAES3BF009800030CFD_g N 0.822