evm.TU.supercontig_10.263 (Carica papaya)
MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01429 (MBD) IPR001739 evm.TU.supercontig_10.263 T261490_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
evm.model.supercontig_10.263 MBD 1 42

Links

Other MBD family TFs
Other Carica papaya TFs

62 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
gene31058-v1.0-hybrid Fragaria vesca gene31058-v1.0-hybrid N 0.833
VIT_11s0016g05580 Vitis vinifera VIT_11s0016g05580 N 0.786
Cla012423 Citrullus lanatus Cla012423 N 0.810
Cla015614 Citrullus lanatus Cla015614 N 0.810
cassava5958.m1 Manihot esculenta cassava5958.m1 N 0.810
cassava6704.valid.m1 Manihot esculenta cassava6704.valid.m1 N 0.976
Cucsa.096390 Cucumis sativus Cucsa.096390 N 0.881
Cucsa.132180 Cucumis sativus Cucsa.132180 N 0.714
Cucsa.295070 Cucumis sativus Cucsa.295070 N 0.810
Aquca_020_00103 Aquilegia coerulea Aquca_020_00103 N 0.833
Bostr.28625s0113 Boechera stricta Bostr.28625s0113 N 0.833
Cagra.2238s0088 Capsella grandiflora Cagra.2238s0088 N 0.833
Carubv10009517m.g Capsella rubella Carubv10009517m.g N 0.833
Ciclev10025929m.g Citrus clementina Ciclev10025929m.g N 0.929
evm.TU.supercontig_46.15 Carica papaya evm.TU.supercontig_46.15 N 0.762
gene15686-v1.0-hybrid Fragaria vesca gene15686-v1.0-hybrid N 0.905
VIT_09s0002g06870 Vitis vinifera VIT_09s0002g06870 N 0.929
Gorai.001G042900 Gossypium raimondii Gorai.001G042900 N 0.810
Gorai.006G101100 Gossypium raimondii Gorai.006G101100 N 0.905
Gorai.009G016600 Gossypium raimondii Gorai.009G016600 N 0.714
Gorai.010G062800 Gossypium raimondii Gorai.010G062800 N 0.786
Gorai.011G083900 Gossypium raimondii Gorai.011G083900 N 0.929
Lus10030108.g Linum usitatissimum Lus10030108.g N 0.738
Lus10043263.g Linum usitatissimum Lus10043263.g N 0.714
MDP0000152128 Malus domestica MDP0000152128 N 0.786
MDP0000248422 Malus domestica MDP0000248422 N 0.786
MDP0000301302 Malus domestica MDP0000301302 N 0.857
MDP0000574053 Malus domestica MDP0000574053 N 0.786
SapurV1A.0034s0480 Salix purpurea SapurV1A.0034s0480 N 0.762
Thhalv10007967m.g Eutrema salsugineum Thhalv10007967m.g N 0.833
PK04144.1 Cannabis sativa PK04144.1 N 0.810
GSMUA_Achr4G31340_001 Musa acuminata GSMUA_Achr4G31340_001 N 0.714
BGIOSGA035814 Oryza indica BGIOSGA035814 N 0.738
Bo8g066360 Brassica oleracea Bo8g066360 N 0.857
Bo8g106130 Brassica oleracea Bo8g106130 N 0.738
Bra016665 Brassica rapa Bra016665 N 0.857
Bra021136 Brassica rapa Bra021136 N 0.810
Bra027207 Brassica rapa Bra027207 N 0.786
BRADI4G21540 Brachypodium distachyon BRADI4G21540 N 0.714
MBD10 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1001305 N 0.833
GLYMA04G23780 Glycine max GLYMA04G23780 N 0.833
GLYMA04G23980 Glycine max GLYMA04G23980 N 0.833
GLYMA06G25310 Glycine max GLYMA06G25310 N 0.833
GLYMA06G30590 Glycine max GLYMA06G30590 N 0.786
GLYMA15G01040 Glycine max GLYMA15G01040 N 0.881
GRMZM2G022365 Zea mays GRMZM2G022365 N 0.714
GSMUA_Achr2G12870_001 Musa acuminata GSMUA_Achr2G12870_001 N 0.714
MBD10 Arabidopsis thaliana AT1G15340 N 0.833
MTR_4g010210 Medicago truncatula MTR_4g010210 N 0.714
OBART12G19140 Oryza barthii OBART12G19140 N 0.738
OGLUM12G20810 Oryza glumaepatula OGLUM12G20810 N 0.738
ONIVA02G25900 Oryza nivara ONIVA02G25900 N 0.738
ORGLA12G0164400 Oryza glaberrima ORGLA12G0164400 N 0.738
ORUFI12G21360 Oryza rufipogon ORUFI12G21360 N 0.738
OS12G0620400 Oryza sativa OS12G0620400 N 0.738
PGSC0003DMG400002913 Solanum tuberosum PGSC0003DMG400002913 N 0.810
PGSC0003DMG400028533 Solanum tuberosum PGSC0003DMG400028533 N 0.833
POPTR_0006s06690 Populus trichocarpa POPTR_0006s06690 N 0.762
PRUPE_ppa008789mg Prunus persica PRUPE_ppa008789mg N 0.786
Si024364m.g Setaria italica Si024364m.g N 0.738
Solyc06g068140.2 Solanum lycopersicum Solyc06g068140.2 N 0.833
Solyc12g009590.1 Solanum lycopersicum Solyc12g009590.1 N 0.810