GRMZM2G104551 (Zea mays)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 GRMZM2G104551 T272015_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK21166.1
M01281_2.00 		Cannabis sativa
HACCWAMY
RKTWGGTD		 PBM
Lambert et al.(2019)
pTH11255 		0.777 0.903
MYB43
M07127_2.00 		Arabidopsis thaliana
NYYYACCWAMYWH
DWRKTWGGTRRRN		 Dap-seq
OMalley et al.(2016)
MYB43_col_a 		0.771 0.849
MYB99
M07151_2.00 		Arabidopsis thaliana
NYYYACCWAMYHH
DDRKTWGGTRRRN		 Dap-seq
OMalley et al.(2016)
MYB99_col_a 		0.672 0.763
MYB99
M07152_2.00 		Arabidopsis thaliana
YHYACCTAMYH
DRKTAGGTRDR		 Dap-seq
OMalley et al.(2016)
MYB99_colamp_a 		0.672 0.763
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GRMZM2G104551_P01 Myb 38 85
GRMZM2G104551_P01 Myb 91 136
GRMZM2G104551_P02 Myb 38 85
GRMZM2G104551_P02 Myb 91 136
GRMZM2G104551_P03 Myb 14 61
GRMZM2G104551_P03 Myb 67 112

Links

Other Myb/SANT family TFs
Other Zea mays TFs

307 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
VIT_12s0134g00490 Vitis vinifera VIT_12s0134g00490 I
POPTR_0013s14560 Populus trichocarpa POPTR_0013s14560 I
POPTR_0019s14120 Populus trichocarpa POPTR_0019s14120 I
Lus10039735.g Linum usitatissimum Lus10039735.g I
Lus10039734.g Linum usitatissimum Lus10039734.g I
Solyc07g053230.2 Solanum lycopersicum Solyc07g053230.2 I
Solyc07g054980.1 Solanum lycopersicum Solyc07g054980.1 I
TCM_007865 Theobroma cacao TCM_007865 I
TCM_007868 Theobroma cacao TCM_007868 I
VIT_12s0134g00480 Vitis vinifera VIT_12s0134g00480 I
MDP0000155426 Malus domestica MDP0000155426 I
Gorai.013G072900 Gossypium raimondii Gorai.013G072900 I
cassava6764.valid.m1 Manihot esculenta cassava6764.valid.m1 I
Ciclev10016303m.g Citrus clementina Ciclev10016303m.g I
Eucgr.A01766 Eucalyptus grandis Eucgr.A01766 I
Eucgr.A01767 Eucalyptus grandis Eucgr.A01767 I
Gorai.013G071600 Gossypium raimondii Gorai.013G071600 I
Gorai.012G132400 Gossypium raimondii Gorai.012G132400 I
Gorai.002G016800 Gossypium raimondii Gorai.002G016800 I
PGSC0003DMG401026177 Solanum tuberosum PGSC0003DMG401026177 I
GLYMA06G45554 Glycine max GLYMA06G45554 I
GLYMA12G11330 Glycine max GLYMA12G11330 I
SapurV1A.2051s0040 Salix purpurea SapurV1A.2051s0040 I
GLYMA12G32530 Glycine max GLYMA12G32530 I
SapurV1A.0417s0150 Salix purpurea SapurV1A.0417s0150 I
GLYMA13G37903 Glycine max GLYMA13G37903 I
GSMUA_Achr11G22820_001 Musa acuminata GSMUA_Achr11G22820_001 I
SapurV1A.0417s0130 Salix purpurea SapurV1A.0417s0130 I
SapurV1A.0048s0170 Salix purpurea SapurV1A.0048s0170 I
orange1.1g024860m.g Citrus sinensis orange1.1g024860m.g I
PGSC0003DMG402026177 Solanum tuberosum PGSC0003DMG402026177 I
SapurV1A.0417s0140 Salix purpurea SapurV1A.0417s0140 N
Lus10031607.g Linum usitatissimum Lus10031607.g N
Lus10033738.g Linum usitatissimum Lus10033738.g N
Lus10018547.g Linum usitatissimum Lus10018547.g N
SapurV1A.0048s0160 Salix purpurea SapurV1A.0048s0160 N
MDP0000407613 Malus domestica MDP0000407613 N
PK24260.1 Cannabis sativa PK24260.1 N
Pm015302 Prunus mume Pm015302 N
chr3.LjT47O18.40.nc Lotus japonicus chr3.LjT47O18.40.nc N
Gorai.011G021300 Gossypium raimondii Gorai.011G021300 N
Gorai.005G206800 Gossypium raimondii Gorai.005G206800 N
chr3.LjT47O18.60.nc Lotus japonicus chr3.LjT47O18.60.nc N
POPTR_0019s14130 Populus trichocarpa POPTR_0019s14130 N
GLYMA06G45540 Glycine max GLYMA06G45540 N
GLYMA06G45547 Glycine max GLYMA06G45547 N
GLYMA12G11340 Glycine max GLYMA12G11340 N
GLYMA12G11390 Glycine max GLYMA12G11390 N
GLYMA12G32541 Glycine max GLYMA12G32541 N
GSMUA_Achr8G14540_001 Musa acuminata GSMUA_Achr8G14540_001 N
MTR_0008s0390 Medicago truncatula MTR_0008s0390 N
MTR_0251s0050 Medicago truncatula MTR_0251s0050 N
MTR_2g089420 Medicago truncatula MTR_2g089420 N
MTR_2g089450 Medicago truncatula MTR_2g089450 N
PGSC0003DMG400013752 Solanum tuberosum PGSC0003DMG400013752 N
gene01998-v1.0-hybrid Fragaria vesca gene01998-v1.0-hybrid N
POPTR_0019s14140 Populus trichocarpa POPTR_0019s14140 N
PRUPE_ppa026553mg Prunus persica PRUPE_ppa026553mg N
Solyc12g005640.1 Solanum lycopersicum Solyc12g005640.1 N
VIT_00s0203g00170 Vitis vinifera VIT_00s0203g00170 N
Ca_22597 Cicer arietinum Ca_22597 N
GLYMA06G45531 Glycine max GLYMA06G45531 N
Eucgr.D00050 Eucalyptus grandis Eucgr.D00050 N
Eucgr.L02563 Eucalyptus grandis Eucgr.L02563 N
evm.TU.supercontig_27.156 Carica papaya evm.TU.supercontig_27.156 N
evm.TU.supercontig_34.62 Carica papaya evm.TU.supercontig_34.62 N