Cla007104 (Citrullus lanatus)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Cla007104 T283174_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cla007104 Myb 210 260

Links

Other Myb/SANT family TFs
Other Citrullus lanatus TFs

85 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Carubv10026052m.g Capsella rubella Carubv10026052m.g I 0.679
VIT_16s0100g00420 Vitis vinifera VIT_16s0100g00420 I 0.779
Ca_14780 Cicer arietinum Ca_14780 I 0.677
Ca_15151 Cicer arietinum Ca_15151 I 0.680
Ca_20899 Cicer arietinum Ca_20899 I 0.700
Pm005877 Prunus mume Pm005877 I 0.678
Pm027701 Prunus mume Pm027701 I 0.694
29737.m001227 Ricinus communis 29737.m001227 I 0.679
cassava18404.valid.m1 Manihot esculenta cassava18404.valid.m1 I 0.668
cassava18405.valid.m1 Manihot esculenta cassava18405.valid.m1 I 0.668
cassava262.valid.m1 Manihot esculenta cassava262.valid.m1 I 0.679
cassava37074.valid.m1 Manihot esculenta cassava37074.valid.m1 I 0.679
cassava37075.valid.m1 Manihot esculenta cassava37075.valid.m1 I 0.679
mgf008790m Mimulus guttatus mgf008790m I 0.675
Bostr.26833s0442 Boechera stricta Bostr.26833s0442 I 0.679
Cagra.0891s0003 Capsella grandiflora Cagra.0891s0003 I 0.679
AMTR_s00086p00182350 Amborella trichopoda AMTR_s00086p00182350 I 0.694
Eucgr.C00380 Eucalyptus grandis Eucgr.C00380 I 0.694
evm.TU.supercontig_46.117 Carica papaya evm.TU.supercontig_46.117 I 0.694
Gorai.001G030600 Gossypium raimondii Gorai.001G030600 I 0.679
Gorai.004G291100 Gossypium raimondii Gorai.004G291100 I 0.679
Gorai.008G280500 Gossypium raimondii Gorai.008G280500 I 0.708
Gorai.009G054200 Gossypium raimondii Gorai.009G054200 I 0.694
MDP0000124301 Malus domestica MDP0000124301 I 0.680
MDP0000155328 Malus domestica MDP0000155328 I 0.680
orange1.1g009670m.g Citrus sinensis orange1.1g009670m.g I 0.672
SapurV1A.0100s0230 Salix purpurea SapurV1A.0100s0230 I 0.672
SapurV1A.0347s0250 Salix purpurea SapurV1A.0347s0250 I 0.672
Thhalv10015296m.g Eutrema salsugineum Thhalv10015296m.g I 0.679
chr4.CM0042.1440.nc Lotus japonicus chr4.CM0042.1440.nc I 0.669
chr5.CM0345.260.nd Lotus japonicus chr5.CM0345.260.nd I 0.676
chr6.CM0037.920.nc Lotus japonicus chr6.CM0037.920.nc I 0.679
MTR_0450s0040 Medicago truncatula MTR_0450s0040 I 0.702
AMTR_s00057p00108840 Amborella trichopoda AMTR_s00057p00108840 I 0.702
Bo2g028820 Brassica oleracea Bo2g028820 I 0.679
Bra020390 Brassica rapa Bra020390 I 0.679
APRR4 Arabidopsis lyrata fgenesh1_pg.C_scaffold_8000961 I 0.680
GLYMA02G09451 Glycine max GLYMA02G09451 I 0.680
GLYMA05G34516 Glycine max GLYMA05G34516 I 0.677
GLYMA07G26890 Glycine max GLYMA07G26890 I 0.680
GLYMA09G14650 Glycine max GLYMA09G14650 I 0.679
GLYMA15G24770 Glycine max GLYMA15G24770 I 0.679
GLYMA16G32311 Glycine max GLYMA16G32311 I 0.756
TCM_037098 Theobroma cacao TCM_037098 I 0.679
MTR_1g032570 Medicago truncatula MTR_1g032570 I 0.680
MTR_7g026400 Medicago truncatula MTR_7g026400 I 0.718
PGSC0003DMG400007823 Solanum tuberosum PGSC0003DMG400007823 I 0.694
POPTR_0006s20220 Populus trichocarpa POPTR_0006s20220 I 0.672
POPTR_0018s11960 Populus trichocarpa POPTR_0018s11960 I 0.672
PRUPE_ppa018934mg Prunus persica PRUPE_ppa018934mg I 0.694
PRUPE_ppa002493mg Prunus persica PRUPE_ppa002493mg I 0.678
Solyc12g010330.1 Solanum lycopersicum Solyc12g010330.1 I 0.694
POPTR_0015s13860 Populus trichocarpa POPTR_0015s13860 I 0.700
TCM_015085 Theobroma cacao TCM_015085 I 0.693
Bo9g175250 Brassica oleracea Bo9g175250 N 0.685
Bra005928 Brassica rapa Bra005928 N 0.724
Bra009284 Brassica rapa Bra009284 N 0.685
orange1.1g043479m.g Citrus sinensis orange1.1g043479m.g N 0.760
Thhalv10016040m.g Eutrema salsugineum Thhalv10016040m.g N 0.685
gene03235-v1.0-hybrid Fragaria vesca gene03235-v1.0-hybrid N 0.701
orange1.1g040406m.g Citrus sinensis orange1.1g040406m.g N 0.757
Bo3g004250 Brassica oleracea Bo3g004250 N 0.671
MDP0000228719 Malus domestica MDP0000228719 N 0.789
PRUPE_ppa026574mg Prunus persica PRUPE_ppa026574mg N 0.704
ARR21 Arabidopsis lyrata fgenesh1_pm.C_scaffold_6000557 N 0.677
Cla006313 Citrullus lanatus Cla006313 N 0.711
PRUPE_ppa023185mg Prunus persica PRUPE_ppa023185mg N 0.693
Pm017445 Prunus mume Pm017445 N 0.704
VIT_16s0100g00430 Vitis vinifera VIT_16s0100g00430 N 0.726
gene13325-v1.0-hybrid Fragaria vesca gene13325-v1.0-hybrid N 0.693
cassava35050.m1 Manihot esculenta cassava35050.m1 N 0.779
GLYMA09G27151 Glycine max GLYMA09G27151 N 0.746
evm.TU.supercontig_107.3 Carica papaya evm.TU.supercontig_107.3 N 0.779
Ciclev10006834m.g Citrus clementina Ciclev10006834m.g N 0.760
Ciclev10006586m.g Citrus clementina Ciclev10006586m.g N 0.757
30147.m014309 Ricinus communis 30147.m014309 N 0.742
Carubv10003421m.g Capsella rubella Carubv10003421m.g N 0.677
Bostr.13129s0247 Boechera stricta Bostr.13129s0247 N 0.677
mgf019327m Mimulus guttatus mgf019327m N 0.776
mgf018042m Mimulus guttatus mgf018042m N 0.711
cassava21270.m1 Manihot esculenta cassava21270.m1 N 0.699
IGS.gm_5_00099 Chlorella NC64A IGS.gm_5_00099 N 0.681
Cucsa.362450 Cucumis sativus Cucsa.362450 N 0.781
Cucsa.251000 Cucumis sativus Cucsa.251000 N 0.711
POPTR_0012s13900 Populus trichocarpa POPTR_0012s13900 N 0.680