Gorai.005G206800 (Gossypium raimondii)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Gorai.005G206800 T287574_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.005G206800.1 Myb 14 61
Gorai.005G206800.1 Myb 67 112

Links

Other Myb/SANT family TFs
Other Gossypium raimondii TFs

107 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ATMYB14 Arabidopsis lyrata Al_scaffold_0004_1573 I 0.661
MYB14 Arabidopsis thaliana AT2G31180 I 0.661
BGIOSGA031688 Oryza indica BGIOSGA031688 I 0.668
GLYMA06G45554 Glycine max GLYMA06G45554 I 0.757
GLYMA06G45570 Glycine max GLYMA06G45570 I 0.689
GLYMA12G11330 Glycine max GLYMA12G11330 I 0.723
GLYMA12G32530 Glycine max GLYMA12G32530 I 0.707
GLYMA13G37903 Glycine max GLYMA13G37903 I 0.716
GSMUA_Achr4G21910_001 Musa acuminata GSMUA_Achr4G21910_001 I 0.688
GSMUA_Achr5G03920_001 Musa acuminata GSMUA_Achr5G03920_001 I 0.691
GSMUA_Achr5G14600_001 Musa acuminata GSMUA_Achr5G14600_001 I 0.692
OB0039G10010 Oryza brachyantha OB0039G10010 I 0.672
ORGLA04G0158700 Oryza glaberrima ORGLA04G0158700 I 0.667
ORUFI04G20280 Oryza rufipogon ORUFI04G20280 I 0.667
ORUFI10G14060 Oryza rufipogon ORUFI10G14060 I 0.668
OS10G0478300 Oryza sativa OS10G0478300 I 0.668
PGSC0003DMG401026177 Solanum tuberosum PGSC0003DMG401026177 I 0.703
PGSC0003DMG402026177 Solanum tuberosum PGSC0003DMG402026177 I 0.692
POPTR_0013s14560 Populus trichocarpa POPTR_0013s14560 I 0.817
Solyc07g053230.2 Solanum lycopersicum Solyc07g053230.2 I 0.707
Solyc07g053240.2 Solanum lycopersicum Solyc07g053240.2 I 0.696
Solyc07g054980.1 Solanum lycopersicum Solyc07g054980.1 I 0.743
TCM_007865 Theobroma cacao TCM_007865 I 0.871
TCM_020889 Theobroma cacao TCM_020889 I 0.661
TCM_026197 Theobroma cacao TCM_026197 I 0.674
TCM_030020 Theobroma cacao TCM_030020 I 0.707
VIT_12s0134g00480 Vitis vinifera VIT_12s0134g00480 I 0.831
VIT_12s0134g00490 Vitis vinifera VIT_12s0134g00490 I 0.731
Cla006077 Citrullus lanatus Cla006077 I 0.668
cassava6764.valid.m1 Manihot esculenta cassava6764.valid.m1 I 0.700
Bostr.24513s0107 Boechera stricta Bostr.24513s0107 I 0.691
Cagra.7286s0009 Capsella grandiflora Cagra.7286s0009 I 0.670
Carubv10023905m.g Capsella rubella Carubv10023905m.g I 0.670
Ciclev10016303m.g Citrus clementina Ciclev10016303m.g I 0.760
Ciclev10017677m.g Citrus clementina Ciclev10017677m.g I 0.680
Ciclev10017679m.g Citrus clementina Ciclev10017679m.g I 0.719
Eucgr.A01766 Eucalyptus grandis Eucgr.A01766 I 0.748
Eucgr.A01767 Eucalyptus grandis Eucgr.A01767 I 0.733
Eucgr.D00040 Eucalyptus grandis Eucgr.D00040 I 0.688
Eucgr.D00042 Eucalyptus grandis Eucgr.D00042 I 0.688
Eucgr.D00751 Eucalyptus grandis Eucgr.D00751 I 0.672
Eucgr.H00158 Eucalyptus grandis Eucgr.H00158 I 0.670
Eucgr.H03057 Eucalyptus grandis Eucgr.H03057 I 0.670
Eucgr.K03262 Eucalyptus grandis Eucgr.K03262 I 0.661
Gorai.002G016800 Gossypium raimondii Gorai.002G016800 I 0.840
Gorai.012G132400 Gossypium raimondii Gorai.012G132400 I 0.856
Lus10021185.g Linum usitatissimum Lus10021185.g I 0.661
Lus10022021.g Linum usitatissimum Lus10022021.g I 0.667
Lus10039734.g Linum usitatissimum Lus10039734.g I 0.814
Lus10039735.g Linum usitatissimum Lus10039735.g I 0.814
MDP0000131822 Malus domestica MDP0000131822 I 0.714
MDP0000155426 Malus domestica MDP0000155426 I 0.841
MDP0000289283 Malus domestica MDP0000289283 I 0.688
orange1.1g024860m.g Citrus sinensis orange1.1g024860m.g I 0.784
SapurV1A.0417s0130 Salix purpurea SapurV1A.0417s0130 I 0.700
PK08038.1 Cannabis sativa PK08038.1 I 0.664
PK20358.1 Cannabis sativa PK20358.1 I 0.668
PK29337.1 Cannabis sativa PK29337.1 I 0.674
PDK_20s1320951g001 Phoenix dactylifera PDK_20s1320951g001 I 0.681
GLYMA06G45540 Glycine max GLYMA06G45540 N 0.713
GLYMA06G45547 Glycine max GLYMA06G45547 N 0.762
GLYMA12G11340 Glycine max GLYMA12G11340 N 0.723
GLYMA12G11390 Glycine max GLYMA12G11390 N 0.722
GLYMA12G32541 Glycine max GLYMA12G32541 N 0.725
MTR_0008s0390 Medicago truncatula MTR_0008s0390 N 0.751
MTR_0008s0470 Medicago truncatula MTR_0008s0470 N 0.716
MTR_0251s0050 Medicago truncatula MTR_0251s0050 N 0.749
MTR_2g089420 Medicago truncatula MTR_2g089420 N 0.733
MTR_2g089450 Medicago truncatula MTR_2g089450 N 0.790
PGSC0003DMG400013752 Solanum tuberosum PGSC0003DMG400013752 N 0.698
PGSC0003DMG400015087 Solanum tuberosum PGSC0003DMG400015087 N 0.707
PGSC0003DMG400026176 Solanum tuberosum PGSC0003DMG400026176 N 0.664
POPTR_0011s04010 Populus trichocarpa POPTR_0011s04010 N 0.688
POPTR_0011s04020 Populus trichocarpa POPTR_0011s04020 N 0.676
POPTR_0019s14140 Populus trichocarpa POPTR_0019s14140 N 0.730
PRUPE_ppa015081mg Prunus persica PRUPE_ppa015081mg N 0.705
PRUPE_ppa026553mg Prunus persica PRUPE_ppa026553mg N 0.820
Solyc12g005640.1 Solanum lycopersicum Solyc12g005640.1 N 0.698
VIT_00s0203g00170 Vitis vinifera VIT_00s0203g00170 N 0.683
Ca_22597 Cicer arietinum Ca_22597 N 0.760
Pm009880 Prunus mume Pm009880 N 0.716
Pm015302 Prunus mume Pm015302 N 0.820
29933.m001454 Ricinus communis 29933.m001454 N 0.665
cassava26894.m1 Manihot esculenta cassava26894.m1 N 0.761
cassava5261.m1 Manihot esculenta cassava5261.m1 N 0.662
cassava5263.m1 Manihot esculenta cassava5263.m1 N 0.661
Eucgr.D00037 Eucalyptus grandis Eucgr.D00037 N 0.664
evm.TU.supercontig_27.156 Carica papaya evm.TU.supercontig_27.156 N 0.710
evm.TU.supercontig_34.62 Carica papaya evm.TU.supercontig_34.62 N 0.760
gene01998-v1.0-hybrid Fragaria vesca gene01998-v1.0-hybrid N 0.771
gene30736-v1.0-hybrid Fragaria vesca gene30736-v1.0-hybrid N 0.680
Gorai.010G148300 Gossypium raimondii Gorai.010G148300 N 0.698
Gorai.011G021300 Gossypium raimondii Gorai.011G021300 N 0.691
Lus10018545.g Linum usitatissimum Lus10018545.g N 0.676
Lus10018546.g Linum usitatissimum Lus10018546.g N 0.694
Lus10018547.g Linum usitatissimum Lus10018547.g N 0.696
Lus10031607.g Linum usitatissimum Lus10031607.g N 0.745
Lus10033738.g Linum usitatissimum Lus10033738.g N 0.747
Lus10039771.g Linum usitatissimum Lus10039771.g N 0.704
Lus10039772.g Linum usitatissimum Lus10039772.g N 0.690
MDP0000407613 Malus domestica MDP0000407613 N 0.821
orange1.1g037956m.g Citrus sinensis orange1.1g037956m.g N 0.711
SapurV1A.0048s0160 Salix purpurea SapurV1A.0048s0160 N 0.814
PK24260.1 Cannabis sativa PK24260.1 N 0.843
chr3.LjT47O18.40.nc Lotus japonicus chr3.LjT47O18.40.nc N 0.756
chr3.LjT47O18.60.nc Lotus japonicus chr3.LjT47O18.60.nc N 0.731
chr3.LjT47O18.70.nc Lotus japonicus chr3.LjT47O18.70.nc N 0.701