Pavir.J17249 (Panicum virgatum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Pavir.J17249 T289392_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J17249.1.p Myb 5 57

Links

Other Myb/SANT family TFs
Other Panicum virgatum TFs

23 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cagra.7526s0026 Capsella grandiflora Cagra.7526s0026 N
Si006856m.g Setaria italica Si006856m.g N
Solyc08g061140.2 Solanum lycopersicum Solyc08g061140.2 N
TCM_038389 Theobroma cacao TCM_038389 N
Traes_7BL_E2E7AA383 Triticum aestivum Traes_7BL_E2E7AA383 N
Traes_7DL_613F5240E Triticum aestivum Traes_7DL_613F5240E N
OCP3 Vitis vinifera VIT_04s0008g05190 N
Cla021272 Citrullus lanatus Cla021272 N
Pm004594 Prunus mume Pm004594 N
Cucsa.310460 Cucumis sativus Cucsa.310460 N
Bostr.23997s0022 Boechera stricta Bostr.23997s0022 N
Sb10g023400 Sorghum bicolor Sb10g023400 N
Carubv10002492m.g Capsella rubella Carubv10002492m.g N
evm.TU.supercontig_115.10 Carica papaya evm.TU.supercontig_115.10 N
gene11668-v1.0-hybrid Fragaria vesca gene11668-v1.0-hybrid N
Gorai.004G274200 Gossypium raimondii Gorai.004G274200 N
MDP0000119866 Malus domestica MDP0000119866 N
MDP0000202143 Malus domestica MDP0000202143 N
Pavir.Da00552 Panicum virgatum Pavir.Da00552 N
Pavir.Db01233 Panicum virgatum Pavir.Db01233 N
Thhalv10013990m.g Eutrema salsugineum Thhalv10013990m.g N
PK00680.1 Cannabis sativa PK00680.1 N
OBART06G20210 Oryza barthii OBART06G20210 N
BGIOSGA023211 Oryza indica BGIOSGA023211 N
Bo9g171420 Brassica oleracea Bo9g171420 N
Bra008975 Brassica rapa Bra008975 N
BRADI1G36770 Brachypodium distachyon BRADI1G36770 N
BRADI1G58817 Brachypodium distachyon BRADI1G58817 N
OCP3 Arabidopsis lyrata fgenesh2_kg.6__1093__AT5G11270.1 N
GRMZM2G163641 Zea mays GRMZM2G163641 N
LPERR06G16850 Leersia perrieri LPERR06G16850 N
MLOC_45474 Hordeum vulgare MLOC_45474 N
OB06G27850 Oryza brachyantha OB06G27850 N
OCP3 Arabidopsis thaliana AT5G11270 N
OGLUM06G21270 Oryza glumaepatula OGLUM06G21270 N
OLONG_013537 Oryza longistaminata OLONG_013537 N
OMERI06G20820 Oryza meridionalis OMERI06G20820 N
ONIVA06G23990 Oryza nivara ONIVA06G23990 N
OPUNC06G18430 Oryza punctata OPUNC06G18430 N
ORUFI06G21620 Oryza rufipogon ORUFI06G21620 N
OS06G0601000 Oryza sativa OS06G0601000 N
PGSC0003DMG400020785 Solanum tuberosum PGSC0003DMG400020785 N
PRUPE_ppa007560mg Prunus persica PRUPE_ppa007560mg N