TsM_000529300 (Taenia solium)
ARID/BRIGHT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01388 (ARID) IPR001606 TsM_000529300 T016756_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ACYPI009013
M01655_2.00 		Acyrthosiphon pisum
NDATHAADN
NHTTDATHN		 PBM
Weirauch et al.(2014)
pTH5117 		0.467 0.447
retn
M01664_2.00 		Drosophila melanogaster
NDATHRNN
NNYDATHN		 PBM
Weirauch et al.(2014)
pTH5119 		0.444 0.424
retn
M03590_2.00 		Drosophila melanogaster
NNATTRATHN
NDATYAATNN		 SELEX
Nitta et al.(2015)
retn_1 		0.444 0.424
retn
M05899_2.00 		Drosophila melanogaster
AATYAAAM
KTTTRATT		 B1H
Zhu et al.(2011)
retn_SANGER_5_FBgn0004795 		0.444 0.424
retn
M09768_2.00 		Drosophila melanogaster
NNRATTAADN
NHTTAATYNN		 Transfac
Matys et al.(2006)
I$DRI_01 		0.444 0.424
For this family, TFs with SR scores > 0.422 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
TsM_000529300 ARID/BRIGHT 581 666

Links

Other ARID/BRIGHT family TFs
Other Taenia solium TFs

111 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29883.m002035 Ricinus communis 29883.m002035 I
30072.m000955 Ricinus communis 30072.m000955 I
30174.m008898 Ricinus communis 30174.m008898 I
AMTR_s00041p00044170 Amborella trichopoda AMTR_s00041p00044170 I
Aquca_009_00560 Aquilegia coerulea Aquca_009_00560 I
Aquca_009_00958 Aquilegia coerulea Aquca_009_00958 I
Aquca_013_00578 Aquilegia coerulea Aquca_013_00578 I
Aquca_017_00683 Aquilegia coerulea Aquca_017_00683 I
Aquca_034_00401 Aquilegia coerulea Aquca_034_00401 I
BGIOSGA000736 Oryza indica BGIOSGA000736 N
BGIOSGA005344 Oryza indica BGIOSGA005344 I
BGIOSGA011118 Oryza indica BGIOSGA011118 I
BGIOSGA032254 Oryza indica BGIOSGA032254 I
Bo1g153580 Brassica oleracea Bo1g153580 I
Bo3g036030 Brassica oleracea Bo3g036030 I
Bo4g016000 Brassica oleracea Bo4g016000 I
Bo4g024620 Brassica oleracea Bo4g024620 I
Bo4g191530 Brassica oleracea Bo4g191530 I
Bo4g195520 Brassica oleracea Bo4g195520 I
Bo9g002150 Brassica oleracea Bo9g002150 I
Bostr.14547s0031 Boechera stricta Bostr.14547s0031 I
Bostr.19046s0098 Boechera stricta Bostr.19046s0098 I
Bostr.25993s0538 Boechera stricta Bostr.25993s0538 I
Bra000257 Brassica rapa Bra000257 I
Bra004693 Brassica rapa Bra004693 I
Bra004910 Brassica rapa Bra004910 I
Bra016877 Brassica rapa Bra016877 I
Bra036436 Brassica rapa Bra036436 I
Bra037322 Brassica rapa Bra037322 I
Bra040311 Brassica rapa Bra040311 I
BRADI1G68170 Brachypodium distachyon BRADI1G68170 I
BRADI1G75110 Brachypodium distachyon BRADI1G75110 I
BRADI2G51310 Brachypodium distachyon BRADI2G51310 N
BRADI3G22510 Brachypodium distachyon BRADI3G22510 I
BRADI3G55680 Brachypodium distachyon BRADI3G55680 I
Cagra.1261s0013 Capsella grandiflora Cagra.1261s0013 I
Cagra.2098s0013 Capsella grandiflora Cagra.2098s0013 I
Cagra.2636s0029 Capsella grandiflora Cagra.2636s0029 I
Carubv10015417m.g Capsella rubella Carubv10015417m.g I
Carubv10025548m.g Capsella rubella Carubv10025548m.g I
cassava15337.m1 Manihot esculenta cassava15337.m1 I
cassava15612.m1 Manihot esculenta cassava15612.m1 I
cassava25975.m1 Manihot esculenta cassava25975.m1 I
cassava28659.m1 Manihot esculenta cassava28659.m1 I
cassava36912.valid.m1 Manihot esculenta cassava36912.valid.m1 I
cassava40664.m1 Manihot esculenta cassava40664.m1 I
cassava41632.m1 Manihot esculenta cassava41632.m1 I
Ca_19598 Cicer arietinum Ca_19598 I
Ca_19716 Cicer arietinum Ca_19716 I
Ca_20429 Cicer arietinum Ca_20429 I
chr1.CM1255.40.nc Lotus japonicus chr1.CM1255.40.nc I
chr1.LjT38H23.30.nd Lotus japonicus chr1.LjT38H23.30.nd I
chr2.LjT13P17.280.nd Lotus japonicus chr2.LjT13P17.280.nd I
chr3.LjT44N20.90.nd Lotus japonicus chr3.LjT44N20.90.nd I
chr5.CM0494.160.nd Lotus japonicus chr5.CM0494.160.nd I
Ciclev10021843m.g Citrus clementina Ciclev10021843m.g I
Ciclev10021992m.g Citrus clementina Ciclev10021992m.g I
Ciclev10023341m.g Citrus clementina Ciclev10023341m.g I
Ciclev10024416m.g Citrus clementina Ciclev10024416m.g I
Cla002965 Citrullus lanatus Cla002965 I
Cla007068 Citrullus lanatus Cla007068 I
Cla021625 Citrullus lanatus Cla021625 I
Cucsa.257700 Cucumis sativus Cucsa.257700 I
Cucsa.338130 Cucumis sativus Cucsa.338130 I
Cucsa.362830 Cucumis sativus Cucsa.362830 I
Cucsa.362840 Cucumis sativus Cucsa.362840 I
Cucsa.388160 Cucumis sativus Cucsa.388160 I
Eucgr.B01529 Eucalyptus grandis Eucgr.B01529 I
Eucgr.E01414 Eucalyptus grandis Eucgr.E01414 I
Eucgr.K03284 Eucalyptus grandis Eucgr.K03284 I
evm.TU.supercontig_1.438 Carica papaya evm.TU.supercontig_1.438 I
evm.TU.supercontig_18.117 Carica papaya evm.TU.supercontig_18.117 I
evm.TU.supercontig_18.118 Carica papaya evm.TU.supercontig_18.118 I
F775_02052 Aegilops tauschii F775_02052 I
F775_22967 Aegilops tauschii F775_22967 I
gene08250-v1.0-hybrid Fragaria vesca gene08250-v1.0-hybrid I
gene08253-v1.0-hybrid Fragaria vesca gene08253-v1.0-hybrid I
gene19355-v1.0-hybrid Fragaria vesca gene19355-v1.0-hybrid I
gene24461-v1.0-hybrid Fragaria vesca gene24461-v1.0-hybrid I
GLYMA01G34540 Glycine max GLYMA01G34540 I
GLYMA02G27230 Glycine max GLYMA02G27230 I
GLYMA03G02620 Glycine max GLYMA03G02620 I
GLYMA03G02631 Glycine max GLYMA03G02631 I
GLYMA03G31830 Glycine max GLYMA03G31830 I
GLYMA09G40500 Glycine max GLYMA09G40500 I
GLYMA10G04040 Glycine max GLYMA10G04040 I
GLYMA10G04050 Glycine max GLYMA10G04050 I
GLYMA10G11031 Glycine max GLYMA10G11031 I
GLYMA13G18210 Glycine max GLYMA13G18210 I
GLYMA14G07260 Glycine max GLYMA14G07260 N
GLYMA18G45320 Glycine max GLYMA18G45320 I
GLYMA19G34600 Glycine max GLYMA19G34600 I
Gorai.001G251600 Gossypium raimondii Gorai.001G251600 I
Gorai.004G073300 Gossypium raimondii Gorai.004G073300 I
Gorai.004G073400 Gossypium raimondii Gorai.004G073400 I
Gorai.004G161100 Gossypium raimondii Gorai.004G161100 I
Gorai.004G219900 Gossypium raimondii Gorai.004G219900 I
Gorai.004G220000 Gossypium raimondii Gorai.004G220000 I
Gorai.007G144400 Gossypium raimondii Gorai.007G144400 I
Gorai.007G346200 Gossypium raimondii Gorai.007G346200 I
Gorai.008G114400 Gossypium raimondii Gorai.008G114400 I
GRMZM2G025758 Zea mays GRMZM2G025758 N
GRMZM2G075499 Zea mays GRMZM2G075499 I
GRMZM2G092542 Zea mays GRMZM2G092542 I
GRMZM2G110913 Zea mays GRMZM2G110913 I
GRMZM2G150594 Zea mays GRMZM2G150594 I
GSMUA_Achr11G02110_001 Musa acuminata GSMUA_Achr11G02110_001 I
GSMUA_Achr1G01350_001 Musa acuminata GSMUA_Achr1G01350_001 I
GSMUA_Achr1G01360_001 Musa acuminata GSMUA_Achr1G01360_001 I
GSMUA_Achr1G02520_001 Musa acuminata GSMUA_Achr1G02520_001 I
GSMUA_Achr2G11240_001 Musa acuminata GSMUA_Achr2G11240_001 I
GSMUA_Achr4G25190_001 Musa acuminata GSMUA_Achr4G25190_001 I
GSMUA_Achr5G11330_001 Musa acuminata GSMUA_Achr5G11330_001 I
GSMUA_Achr5G13230_001 Musa acuminata GSMUA_Achr5G13230_001 I
GSMUA_Achr8G14330_001 Musa acuminata GSMUA_Achr8G14330_001 I
GSMUA_Achr9G10530_001 Musa acuminata GSMUA_Achr9G10530_001 I
GSMUA_AchrUn_randomG07730_001 Musa acuminata GSMUA_AchrUn_randomG07730_001 I
GSMUA_AchrUn_randomG10470_001 Musa acuminata GSMUA_AchrUn_randomG10470_001 I
gw1.157.74.1 Physcomitrella patens gw1.157.74.1 I
gw1.190.59.1 Physcomitrella patens gw1.190.59.1 I
gw1.261.12.1 Physcomitrella patens gw1.261.12.1 I
gw1.35.169.1 Physcomitrella patens gw1.35.169.1 I
gw1.42.84.1 Physcomitrella patens gw1.42.84.1 I
gw1.61.81.1 Physcomitrella patens gw1.61.81.1 I
LBD16 Arabidopsis thaliana AT2G42430 D
LBD16 Arabidopsis lyrata scaffold_403099.1 I
LBD16 Vitis vinifera VIT_07s0005g03030 I
LBD20 Arabidopsis thaliana AT3G03760 I
LBD20 Arabidopsis lyrata fgenesh1_pg.C_scaffold_3000301 I
LBD20 Vitis vinifera VIT_08s0056g01650 I
LBD30 Arabidopsis thaliana AT4G00220 D
LBD30 Arabidopsis lyrata fgenesh2_kg.6__3680__AT4G00220.1 I
LBD30 Vitis vinifera VIT_15s0048g00830 I
LjT35F15.70.nd Lotus japonicus LjT35F15.70.nd I
LPERR01G28060 Leersia perrieri LPERR01G28060 N
LPERR02G31040 Leersia perrieri LPERR02G31040 I
LPERR03G03470 Leersia perrieri LPERR03G03470 I
LPERR03G09330 Leersia perrieri LPERR03G09330 I
Lus10000707.g Linum usitatissimum Lus10000707.g I
Lus10009298.g Linum usitatissimum Lus10009298.g I
Lus10014757.g Linum usitatissimum Lus10014757.g I
Lus10024877.g Linum usitatissimum Lus10024877.g I
Lus10033872.g Linum usitatissimum Lus10033872.g I
Lus10033873.g Linum usitatissimum Lus10033873.g I
MDP0000145761 Malus domestica MDP0000145761 I
MDP0000254224 Malus domestica MDP0000254224 I
MDP0000322059 Malus domestica MDP0000322059 I
MDP0000429067 Malus domestica MDP0000429067 I
mgf006429m Mimulus guttatus mgf006429m I
mgf020773m Mimulus guttatus mgf020773m I
MLOC_10784 Hordeum vulgare MLOC_10784 I
MLOC_55239 Hordeum vulgare MLOC_55239 I
MLOC_61947 Hordeum vulgare MLOC_61947 I
MTR_6g027710 Medicago truncatula MTR_6g027710 I
MTR_7g096530 Medicago truncatula MTR_7g096530 I
MTR_7g096610 Medicago truncatula MTR_7g096610 I
MTR_8g036085 Medicago truncatula MTR_8g036085 I
MTR_8g036105 Medicago truncatula MTR_8g036105 I
OB02G44330 Oryza brachyantha OB02G44330 I
OB03G20590 Oryza brachyantha OB03G20590 I
OB10G12360 Oryza brachyantha OB10G12360 I
OBART01G32570 Oryza barthii OBART01G32570 N
OBART03G10450 Oryza barthii OBART03G10450 I
OGLUM01G36730 Oryza glumaepatula OGLUM01G36730 N
OGLUM02G38740 Oryza glumaepatula OGLUM02G38740 I
OGLUM03G10340 Oryza glumaepatula OGLUM03G10340 I
OGLUM10G03230 Oryza glumaepatula OGLUM10G03230 I
OLONG_001985 Oryza longistaminata OLONG_001985 I
OLONG_028429 Oryza longistaminata OLONG_028429 I
OMERI01G29510 Oryza meridionalis OMERI01G29510 N
OMERI02G35350 Oryza meridionalis OMERI02G35350 I
OMERI03G09680 Oryza meridionalis OMERI03G09680 I
ONIVA01G36850 Oryza nivara ONIVA01G36850 N
ONIVA02G40360 Oryza nivara ONIVA02G40360 I
ONIVA10G03250 Oryza nivara ONIVA10G03250 I
OPUNC01G31580 Oryza punctata OPUNC01G31580 N
OPUNC03G10080 Oryza punctata OPUNC03G10080 I
OPUNC10G02630 Oryza punctata OPUNC10G02630 I
orange1.1g027399m.g Citrus sinensis orange1.1g027399m.g I
orange1.1g036534m.g Citrus sinensis orange1.1g036534m.g I
orange1.1g040761m.g Citrus sinensis orange1.1g040761m.g I
orange1.1g042813m.g Citrus sinensis orange1.1g042813m.g I
ORGLA02G0327800 Oryza glaberrima ORGLA02G0327800 I
ORGLA03G0100400 Oryza glaberrima ORGLA03G0100400 I
ORGLA07G0240800 Oryza glaberrima ORGLA07G0240800 N
ORGLA10G0025200 Oryza glaberrima ORGLA10G0025200 I
ORUFI01G35770 Oryza rufipogon ORUFI01G35770 N
ORUFI02G39110 Oryza rufipogon ORUFI02G39110 I
ORUFI03G10670 Oryza rufipogon ORUFI03G10670 I
ORUFI10G03180 Oryza rufipogon ORUFI10G03180 I
OS01G0772100 Oryza sativa OS01G0772100 N
OS02G0820500 Oryza sativa OS02G0820500 I
OS03G0246900 Oryza sativa OS03G0246900 I
OS10G0162600 Oryza sativa OS10G0162600 I
Pavir.Ia02614 Panicum virgatum Pavir.Ia02614 I
Pavir.Ia03917 Panicum virgatum Pavir.Ia03917 I
Pavir.J34872 Panicum virgatum Pavir.J34872 I
PDK_20s1428661g002 Phoenix dactylifera PDK_20s1428661g002 I
PGSC0003DMG400020069 Solanum tuberosum PGSC0003DMG400020069 I
PGSC0003DMG400022454 Solanum tuberosum PGSC0003DMG400022454 I
PGSC0003DMG402012772 Solanum tuberosum PGSC0003DMG402012772 I
PK23185.1 Cannabis sativa PK23185.1 I
PK25573.1 Cannabis sativa PK25573.1 I
Pm017935 Prunus mume Pm017935 I
Pm017936 Prunus mume Pm017936 I
Pm020627 Prunus mume Pm020627 I
Pm020629 Prunus mume Pm020629 I
Pm028642 Prunus mume Pm028642 I
POPTR_0002s04210 Populus trichocarpa POPTR_0002s04210 I
POPTR_0002s14990 Populus trichocarpa POPTR_0002s14990 I
POPTR_0013s06070 Populus trichocarpa POPTR_0013s06070 I
POPTR_0014s06590 Populus trichocarpa POPTR_0014s06590 I
POPTR_0047s00280 Populus trichocarpa POPTR_0047s00280 I
PRUPE_ppa010383mg Prunus persica PRUPE_ppa010383mg I
PRUPE_ppa019939mg Prunus persica PRUPE_ppa019939mg I
PRUPE_ppa024802mg Prunus persica PRUPE_ppa024802mg I
SapurV1A.0024s0780 Salix purpurea SapurV1A.0024s0780 I
SapurV1A.0024s0790 Salix purpurea SapurV1A.0024s0790 I
SapurV1A.0532s0190 Salix purpurea SapurV1A.0532s0190 I
SapurV1A.1704s0040 Salix purpurea SapurV1A.1704s0040 I
Sb01g024400 Sorghum bicolor Sb01g024400 I
Sb01g041130 Sorghum bicolor Sb01g041130 I
Sb03g035920 Sorghum bicolor Sb03g035920 N
Sb04g037550 Sorghum bicolor Sb04g037550 I
SELMODRAFT_49270 Selaginella moellendorffii SELMODRAFT_49270 I
Si019578m.g Setaria italica Si019578m.g I
Solyc01g091420.1 Solanum lycopersicum Solyc01g091420.1 I
Solyc01g098220.1 Solanum lycopersicum Solyc01g098220.1 I
Solyc06g083930.1 Solanum lycopersicum Solyc06g083930.1 I
Solyc09g066260.2 Solanum lycopersicum Solyc09g066260.2 I
TCM_005496 Theobroma cacao TCM_005496 I
TCM_025849 Theobroma cacao TCM_025849 I
Thhalv10017158m.g Eutrema salsugineum Thhalv10017158m.g I
Thhalv10021301m.g Eutrema salsugineum Thhalv10021301m.g I
Thhalv10028924m.g Eutrema salsugineum Thhalv10028924m.g I
Thhalv10028937m.g Eutrema salsugineum Thhalv10028937m.g I
Traes_4AL_CAF4E16B5 Triticum aestivum Traes_4AL_CAF4E16B5 I
Traes_4AS_5971FF832 Triticum aestivum Traes_4AS_5971FF832 I
Traes_4BL_3FB579782 Triticum aestivum Traes_4BL_3FB579782 I
Traes_4BL_A4D0F4AD6 Triticum aestivum Traes_4BL_A4D0F4AD6 I
Traes_4DL_43D63ABE3 Triticum aestivum Traes_4DL_43D63ABE3 I
Traes_4DL_A2012EA68 Triticum aestivum Traes_4DL_A2012EA68 I
Traes_4DS_11C3B0459 Triticum aestivum Traes_4DS_11C3B0459 I
Traes_6AL_D6045E37C Triticum aestivum Traes_6AL_D6045E37C I
Traes_6AS_4EEA3E388 Triticum aestivum Traes_6AS_4EEA3E388 I
Traes_6BS_179B5B6E1 Triticum aestivum Traes_6BS_179B5B6E1 I
Traes_6DL_850266B2A Triticum aestivum Traes_6DL_850266B2A I
TRIUR3_01477 Triticum urartu TRIUR3_01477 I