Sb07g014640 (Sorghum bicolor)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02892 (zf-BED) IPR003656 Sb07g014640 T027612_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Sb07g014640.1 BED ZF 1 42

Links

Other BED ZF family TFs
Other Sorghum bicolor TFs

6 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29600.m000548 Ricinus communis 29600.m000548 I 0.000
29669.m000844 Ricinus communis 29669.m000844 I 0.000
30170.m014386 Ricinus communis 30170.m014386 I 0.000
AABR07009373.1 Rattus norvegicus ENSRNOG00000011429 I 0.000
ACAC_0000817201 Angiostrongylus cantonensis ACAC_0000817201 N 0.000
ACEP16621 Atta cephalotes ACEP16621 N 0.000
ACOC_0000235301 Angiostrongylus costaricensis ACOC_0000235301 N 0.000
ALUE_0000365901 Ascaris lumbricoides ALUE_0000365901 N 0.000
AMAG_00757 Allomyces macrogynus AMAG_00757 N 0.000
AMAG_02260 Allomyces macrogynus AMAG_02260 N 0.000
AMTR_s00029p00240750 Amborella trichopoda AMTR_s00029p00240750 I 0.000
AMTR_s00044p00160130 Amborella trichopoda AMTR_s00044p00160130 I 0.000
ANCCEY_04224 Ancylostoma ceylanicum ANCCEY_04224 N 0.000
ANCDUO_12352 Ancylostoma duodenale ANCDUO_12352 N 0.000
Aquca_004_00335 Aquilegia coerulea Aquca_004_00335 I 0.000
Aquca_015_00344 Aquilegia coerulea Aquca_015_00344 I 0.000
Aquca_045_00054 Aquilegia coerulea Aquca_045_00054 I 0.000
ASIM_0001178701 Anisakis simplex ASIM_0001178701 N 0.000
ASU_05994 Ascaris suum ASU_05994 N 0.000
ASU_09087 Ascaris suum ASU_09087 N 0.000
BGIOSGA008782 Oryza indica BGIOSGA008782 N 0.000
BGIOSGA027814 Oryza indica BGIOSGA027814 I 0.000
BGIOSGA027819 Oryza indica BGIOSGA027819 I 0.000
Bm8632 Brugia malayi Bm8632 N 0.000
Bo5g030580 Brassica oleracea Bo5g030580 I 0.000
Bo7g061420 Brassica oleracea Bo7g061420 I 0.000
Bo7g101270 Brassica oleracea Bo7g101270 I 0.000
Bo8g070350 Brassica oleracea Bo8g070350 I 0.000
Bo8g081200 Brassica oleracea Bo8g081200 I 0.000
Bostr.0556s0524 Boechera stricta Bostr.0556s0524 I 0.000
Bostr.18351s0219 Boechera stricta Bostr.18351s0219 I 0.000
Bostr.6864s0060 Boechera stricta Bostr.6864s0060 I 0.000
Bostr.7128s0662 Boechera stricta Bostr.7128s0662 I 0.000
Bostr.7128s0663 Boechera stricta Bostr.7128s0663 I 0.000
Bra002073 Brassica rapa Bra002073 I 0.000
Bra025350 Brassica rapa Bra025350 N 0.000
Bra025838 Brassica rapa Bra025838 I 0.000
Bra037266 Brassica rapa Bra037266 I 0.000
BRADI3G51140 Brachypodium distachyon BRADI3G51140 N 0.000
BRADI4G37247 Brachypodium distachyon BRADI4G37247 I 0.000
BTMF_0001080901 Brugia timori BTMF_0001080901 N 0.000
BXY_1081800 Bursaphelenchus xylophilus BXY_1081800 I 0.000
BXY_1081900 Bursaphelenchus xylophilus BXY_1081900 I 0.000
Cagra.0535s0005 Capsella grandiflora Cagra.0535s0005 I 0.000
Cagra.1043s0022 Capsella grandiflora Cagra.1043s0022 I 0.000
Cagra.1891s0017 Capsella grandiflora Cagra.1891s0017 I 0.000
Cagra.6160s0027 Capsella grandiflora Cagra.6160s0027 I 0.000
Cagra.6160s0028 Capsella grandiflora Cagra.6160s0028 I 0.000
Carubv10010586m.g Capsella rubella Carubv10010586m.g I 0.000
Carubv10012681m.g Capsella rubella Carubv10012681m.g I 0.000
Carubv10014808m.g Capsella rubella Carubv10014808m.g I 0.000
Carubv10016819m.g Capsella rubella Carubv10016819m.g I 0.000
Carubv10018109m.g Capsella rubella Carubv10018109m.g I 0.000
cassava18624.valid.m1 Manihot esculenta cassava18624.valid.m1 I 0.000
cassava18625.valid.m1 Manihot esculenta cassava18625.valid.m1 I 0.000
cassava18626.valid.m1 Manihot esculenta cassava18626.valid.m1 I 0.000
cassava23716.valid.m1 Manihot esculenta cassava23716.valid.m1 I 0.000
cassava24859.valid.m1 Manihot esculenta cassava24859.valid.m1 I 0.000
cassava35948.valid.m1 Manihot esculenta cassava35948.valid.m1 I 0.000
Ca_09896 Cicer arietinum Ca_09896 I 0.000
CBN25379 Caenorhabditis brenneri CBN25379 I 0.000
Cflo_05893--XP_624266.1_APIME Camponotus floridanus Cflo_05893--XP_624266.1_APIME N 0.000
chr1.CM0113.560.nc Lotus japonicus chr1.CM0113.560.nc I 0.000
Ciclev10002782m.g Citrus clementina Ciclev10002782m.g I 0.000
Ciclev10016587m.g Citrus clementina Ciclev10016587m.g N 0.000
Ciclev10026715m.g Citrus clementina Ciclev10026715m.g I 0.000
Ciclev10032930m.g Citrus clementina Ciclev10032930m.g I 0.000
CJA04355 Caenorhabditis japonica CJA04355 N 0.000
Cla009093 Citrullus lanatus Cla009093 I 0.000
Cla009222 Citrullus lanatus Cla009222 I 0.000
Cla018386 Citrullus lanatus Cla018386 I 0.000
CRE11852 Caenorhabditis remanei CRE11852 N 0.000
Cucsa.067200 Cucumis sativus Cucsa.067200 I 0.000
Cucsa.300030 Cucumis sativus Cucsa.300030 I 0.000
Cucsa.323100 Cucumis sativus Cucsa.323100 I 0.000
D915_02473 Fasciola hepatica D915_02473 N 0.000
DICVIV_05502 Dictyocaulus viviparus DICVIV_05502 N 0.000
DME_0000779601 Dracunculus medinensis DME_0000779601 N 0.000
ECPE_0000536801 Echinostoma caproni ECPE_0000536801 N 0.000
ENSMMUG00000031258 Macaca mulatta ENSMMUG00000031258 I 0.000
ENSOGAG00000026034 Otolemur garnettii ENSOGAG00000026034 I 0.000
ENSOGAG00000031524 Otolemur garnettii ENSOGAG00000031524 I 0.000
estExt_fgenesh1_pg.C_2230007 Physcomitrella patens estExt_fgenesh1_pg.C_2230007 I 0.000
ETH_00027140 Eimeria tenella ETH_00027140 I 0.000
ETH_00031100 Eimeria tenella ETH_00031100 I 0.000
Eucgr.F03571 Eucalyptus grandis Eucgr.F03571 I 0.000
Eucgr.J02535 Eucalyptus grandis Eucgr.J02535 I 0.000
evm.TU.supercontig_211.6 Carica papaya evm.TU.supercontig_211.6 I 0.000
evm.TU.supercontig_26.174 Carica papaya evm.TU.supercontig_26.174 I 0.000
fgenesh1_pg.scaffold_277000017 Physcomitrella patens fgenesh1_pg.scaffold_277000017 I 0.000
GB47837 Apis mellifera GB47837 N 0.000
GD25013 Drosophila simulans FBgn0196325 N 0.000
GE11532 Drosophila yakuba FBgn0229332 N 0.000
gene13043-v1.0-hybrid Fragaria vesca gene13043-v1.0-hybrid I 0.000
GF12460 Drosophila ananassae FBgn0089497 N 0.000
GG19998 Drosophila erecta FBgn0112197 N 0.000
GH21151 Drosophila grimshawi FBgn0128613 N 0.000
GI18750 Drosophila mojavensis FBgn0141489 N 0.000
GJ21774 Drosophila virilis FBgn0208892 N 0.000
GK22092 Drosophila willistoni FBgn0224077 N 0.000
GL11071 Drosophila persimilis FBgn0148681 N 0.000
GLYMA04G01840 Glycine max GLYMA04G01840 I 0.000
GLYMA06G01970 Glycine max GLYMA06G01970 I 0.000
Gorai.002G115100 Gossypium raimondii Gorai.002G115100 I 0.000
Gorai.005G114500 Gossypium raimondii Gorai.005G114500 I 0.000
Gorai.008G147700 Gossypium raimondii Gorai.008G147700 I 0.000
Gorai.009G186800 Gossypium raimondii Gorai.009G186800 I 0.000
GSMUA_Achr2G11060_001 Musa acuminata GSMUA_Achr2G11060_001 I 0.000
GSMUA_Achr4G25860_001 Musa acuminata GSMUA_Achr4G25860_001 I 0.000
GSMUA_Achr5G11630_001 Musa acuminata GSMUA_Achr5G11630_001 I 0.000
gw1.6.1665.1 Ostreococcus RCC809 gw1.6.1665.1 I 0.000
HCOI01550200 Haemonchus contortus HCOI01550200 N 0.000
HCOI01913300 Haemonchus contortus HCOI01913300 I 0.000
HMG-1 Pisum sativum Q41026_PEA D 0.000
hmg-1.1 Caenorhabditis elegans WBGene00001971 N 0.000
HMGB1 Arabidopsis thaliana AT3G51880 I 0.000
HMGB1 Arabidopsis lyrata fgenesh1_pm.C_scaffold_5001281 I 0.000
HMGB2 Arabidopsis thaliana AT1G20693 I 0.000
HMGB2 Arabidopsis lyrata fgenesh2_kg.1__2255__AT1G20693.2 I 0.000
HMGB3 Arabidopsis thaliana AT1G20696 I 0.000
HMGB3 Arabidopsis lyrata fgenesh2_kg.1__2258__AT1G20696.3 I 0.000
HMGB4 Arabidopsis lyrata fgenesh2_kg.3__3350__AT2G17560.1 I 0.000
HMGB6 Vitis vinifera VIT_10s0071g00870 I 0.000
HPLM_0001324601 Haemonchus placei HPLM_0001324601 N 0.000
Hsal_13112--XP_624266.1_APIME Harpegnathos saltator Hsal_13112--XP_624266.1_APIME N 0.000
L596_g16476 Steinernema carpocapsae L596_g16476 N 0.000
L596_g28088 Steinernema carpocapsae L596_g28088 N 0.000
L889_g16198 Steinernema feltiae L889_g16198 N 0.000
L889_g9094 Steinernema feltiae L889_g9094 N 0.000
L892_g19058 Steinernema scapterisci L892_g19058 N 0.000
L892_g23618 Steinernema scapterisci L892_g23618 N 0.000
L893_g23503 Steinernema glaseri L893_g23503 N 0.000
L893_g29974 Steinernema glaseri L893_g29974 N 0.000
L898_g4830 Steinernema monticolum L898_g4830 N 0.000
L898_g7743 Steinernema monticolum L898_g7743 N 0.000
LDEC020995 Leptinotarsa decemlineata LDEC020995 N 0.000
LOAG_08062 Loa loa LOAG_08062 N 0.000
LPERR08G00140 Leersia perrieri LPERR08G00140 N 0.000
Lus10012252.g Linum usitatissimum Lus10012252.g I 0.000
Lus10016025.g Linum usitatissimum Lus10016025.g I 0.000
MDOA007633 Musca domestica MDOA007633 N 0.000
MDP0000205665 Malus domestica MDP0000205665 I 0.000
MDP0000275042 Malus domestica MDP0000275042 I 0.000
MDP0000310093 Malus domestica MDP0000310093 I 0.000
MDP0000362980 Malus domestica MDP0000362980 I 0.000
MDP0000607529 Malus domestica MDP0000607529 I 0.000
MDP0000757111 Malus domestica MDP0000757111 I 0.000
mgf000913m Mimulus guttatus mgf000913m I 0.000
mgf006113m Mimulus guttatus mgf006113m I 0.000
mgf008076m Mimulus guttatus mgf008076m I 0.000
mgf009330m Mimulus guttatus mgf009330m I 0.000
mgf014518m Mimulus guttatus mgf014518m I 0.000
mgf016608m Mimulus guttatus mgf016608m I 0.000
mgf024995m Mimulus guttatus mgf024995m I 0.000
MTR_3g115580 Medicago truncatula MTR_3g115580 I 0.000
MTR_5g024180 Medicago truncatula MTR_5g024180 I 0.000
MTR_5g082570 Medicago truncatula MTR_5g082570 I 0.000
MTR_7g068280 Medicago truncatula MTR_7g068280 I 0.000
MTR_8g073345 Medicago truncatula MTR_8g073345 I 0.000
nAv.1.0.1.g08227 Acanthocheilonema viteae nAv.1.0.1.g08227 N 0.000
NBR_0001277401 Nippostrongylus brasiliensis NBR_0001277401 N 0.000
NCLIV_043670 Neospora caninum NCLIV_043670 I 0.000
nDi.2.2.2.g08508 Dirofilaria immitis nDi.2.2.2.g08508 N 0.000
NECAME_17555 Necator americanus NECAME_17555 N 0.000
NECAME_17981 Necator americanus NECAME_17981 N 0.000
nLs.2.1.2.g04082 Litomosoides sigmodontis nLs.2.1.2.g04082 N 0.000
nOo.2.0.1.g04208 Onchocerca ochengi nOo.2.0.1.g04208 N 0.000
nOo.2.0.1.g04693 Onchocerca ochengi nOo.2.0.1.g04693 N 0.000
OB02G34710 Oryza brachyantha OB02G34710 N 0.000
OB08G10120 Oryza brachyantha OB08G10120 N 0.000
OBART02G27340 Oryza barthii OBART02G27340 N 0.000
OBART08G00070 Oryza barthii OBART08G00070 I 0.000
OESDEN_09619 Oesophagostomum dentatum OESDEN_09619 N 0.000
OESDEN_24828 Oesophagostomum dentatum OESDEN_24828 N 0.000
OFLC_0000261801 Onchocerca flexuosa OFLC_0000261801 N 0.000
OGLUM02G27900 Oryza glumaepatula OGLUM02G27900 N 0.000
OGLUM08G00090 Oryza glumaepatula OGLUM08G00090 I 0.000
OLONG_014445 Oryza longistaminata OLONG_014445 I 0.000
OMERI02G26620 Oryza meridionalis OMERI02G26620 N 0.000
ONIVA02G29880 Oryza nivara ONIVA02G29880 N 0.000
ONIVA08G00070 Oryza nivara ONIVA08G00070 I 0.000
OPUNC02G25020 Oryza punctata OPUNC02G25020 N 0.000
OPUNC08G00150 Oryza punctata OPUNC08G00150 I 0.000
orange1.1g026850m.g Citrus sinensis orange1.1g026850m.g N 0.000
orange1.1g029982m.g Citrus sinensis orange1.1g029982m.g I 0.000
orange1.1g031906m.g Citrus sinensis orange1.1g031906m.g I 0.000
orange1.1g031973m.g Citrus sinensis orange1.1g031973m.g I 0.000
ORUFI02G28820 Oryza rufipogon ORUFI02G28820 N 0.000
ORUFI08G00080 Oryza rufipogon ORUFI08G00080 I 0.000
OS02G0670400 Oryza sativa OS02G0670400 N 0.000
OS08G0101100 Oryza sativa OS08G0101100 I 0.000
OSTLU_18991 Ostreococcus lucimarinus OSTLU_18991 N 0.000
OSTLU_31946 Ostreococcus lucimarinus OSTLU_31946 I 0.000
PDK_20s1306741g001 Phoenix dactylifera PDK_20s1306741g001 I 0.000
PGSC0003DMG400001567 Solanum tuberosum PGSC0003DMG400001567 I 0.000
PGSC0003DMG400018685 Solanum tuberosum PGSC0003DMG400018685 I 0.000
PGSC0003DMG400025304 Solanum tuberosum PGSC0003DMG400025304 I 0.000
Pm006054 Prunus mume Pm006054 I 0.000
Pm018913 Prunus mume Pm018913 I 0.000
Pm026798 Prunus mume Pm026798 I 0.000
POPTR_0002s01000 Populus trichocarpa POPTR_0002s01000 I 0.000
POPTR_0005s10440 Populus trichocarpa POPTR_0005s10440 I 0.000
POPTR_0008s06730 Populus trichocarpa POPTR_0008s06730 I 0.000
POPTR_0010s19720 Populus trichocarpa POPTR_0010s19720 I 0.000
Ppa-hmg-1.1 Pristionchus pacificus PPA22767 N 0.000
PPAI002521 Phlebotomus papatasi PPAI002521 N 0.000
PRUPE_ppa011596mg Prunus persica PRUPE_ppa011596mg I 0.000
PRUPE_ppa012424mg Prunus persica PRUPE_ppa012424mg I 0.000
PRUPE_ppa012972mg Prunus persica PRUPE_ppa012972mg I 0.000
PRUPE_ppa026912mg Prunus persica PRUPE_ppa026912mg I 0.000
PTRK_0001161700 Parastrongyloides trichosuri PTRK_0001161700 N 0.000
PTRK_0001490800 Parastrongyloides trichosuri PTRK_0001490800 N 0.000
RSKR_0000587700 Rhabditophanes kr3021 RSKR_0000587700 N 0.000
SapurV1A.0016s0600 Salix purpurea SapurV1A.0016s0600 I 0.000
SapurV1A.0085s0030 Salix purpurea SapurV1A.0085s0030 I 0.000
SapurV1A.0266s0310 Salix purpurea SapurV1A.0266s0310 I 0.000
SapurV1A.0766s0120 Salix purpurea SapurV1A.0766s0120 I 0.000
SapurV1A.0825s0160 Salix purpurea SapurV1A.0825s0160 I 0.000
scaffold113-EXSNAP2012.49 Pristionchus exspectatus scaffold113-EXSNAP2012.49 N 0.000
scaffold1425-EXSNAP2012.3 Pristionchus exspectatus scaffold1425-EXSNAP2012.3 N 0.000
SELMODRAFT_18312 Selaginella moellendorffii SELMODRAFT_18312 I 0.000
SELMODRAFT_18313 Selaginella moellendorffii SELMODRAFT_18313 I 0.000
SINV22588 Solenopsis invicta SINV22588 N 0.000
SNAPOd2T00000181001 Oikopleura dioica SNAPOd2T00000181001 N 0.000
SNAPOd2T00016002001 Oikopleura dioica SNAPOd2T00016002001 N 0.000
Solyc02g082700.2 Solanum lycopersicum Solyc02g082700.2 I 0.000
Solyc04g008820.2 Solanum lycopersicum Solyc04g008820.2 I 0.000
SPAL_0000986100 Strongyloides papillosus SPAL_0000986100 N 0.000
SPAL_0001085700 Strongyloides papillosus SPAL_0001085700 N 0.000
Ssrp Drosophila melanogaster FBgn0010278 N 0.000
Ssrp Drosophila pseudoobscura FBgn0078456 N 0.000
SSRP1 Arabidopsis thaliana AT3G28730 I 0.000
SSTP_0000585600 Strongyloides stercoralis SSTP_0000585600 N 0.000
SSTP_0001024100 Strongyloides stercoralis SSTP_0001024100 N 0.000
SVE_0294800 Strongyloides venezuelensis SVE_0294800 N 0.000
SVE_0954900 Strongyloides venezuelensis SVE_0954900 N 0.000
TCM_000068 Theobroma cacao TCM_000068 I 0.000
TCM_007659 Theobroma cacao TCM_007659 I 0.000
TCM_034406 Theobroma cacao TCM_034406 I 0.000
TCNE_0000332201 Toxocara canis TCNE_0000332201 N 0.000
TCNE_0001025901 Toxocara canis TCNE_0001025901 N 0.000
TELCIR_02603 Teladorsagia circumcincta TELCIR_02603 N 0.000
tetur02g08250 Tetranychus urticae tetur02g08250 N 0.000
TGME49_010410 Toxoplasma gondii TGME49_010410 I 0.000
Thhalv10003803m.g Eutrema salsugineum Thhalv10003803m.g I 0.000
Thhalv10009371m.g Eutrema salsugineum Thhalv10009371m.g I 0.000
Thhalv10009970m.g Eutrema salsugineum Thhalv10009970m.g I 0.000
Thhalv10010751m.g Eutrema salsugineum Thhalv10010751m.g I 0.000
Thhalv10022905m.g Eutrema salsugineum Thhalv10022905m.g I 0.000
Traes_5BL_9CC98DD38 Triticum aestivum Traes_5BL_9CC98DD38 I 0.000
Traes_5DL_DD9491112 Triticum aestivum Traes_5DL_DD9491112 I 0.000
TSTA_074230 Talaromyces stipitatus TSTA_074230 N 0.000
VIT_04s0044g00110 Vitis vinifera VIT_04s0044g00110 I 0.000
VIT_13s0067g00640 Vitis vinifera VIT_13s0067g00640 I 0.000
VIT_18s0122g01190 Vitis vinifera VIT_18s0122g01190 I 0.000
WBGene00238628 Onchocerca volvulus WBGene00238628 N 0.000
WUBG_16399 Wuchereria bancrofti WUBG_16399 N 0.000
XM_002306945.1 Populus trichocarpa POPTR_0005s27390 I 0.000