CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PRUPE_ppa005439mg
(
Prunus persica
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
PRUPE_ppa005439mg
T201284_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EMJ19177
GRAS
44
456
LIQLLYSCANHVASGSIENANIWLDHISQLASPDGDTMQRIAAYFNEALADRMLKAWPGLYKALNSTKITSVSEEILVKRLFCDLCPFLKVAYVVTNQAIVEAMEGEKMVHIIDLHSCEPAQWIYLIQTLNARPEGPPHLRITGIHEQKEVLDQMFHRLTEEAGNLNIPFQFNPIVSKLENLDIESLRVKTGEALAVCSVLQLHSLLAADDDLRRKSPLASKNLQKVLHMNKLTLGEWLEKDPISAYNLSPDSALSPLSGGSPKMGSFLTSLWGLSPKLMVITEQESNHNGHTLMDRIMEALNFYGALFDCLESTVPRSPMERQKVEKMLFGEEIKNIIACEGTERTERHEKLEKWILRLELAGFGRVPLSYHGMLQARRQLQGYEGFKIKEENGCLVICWHDRPLFSISAWR
Links
Other
GRAS
family TFs
Other
Prunus persica
TFs
49 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
30024.m001746
Ricinus communis
30024.m001746
N
0.732
30131.m007244
Ricinus communis
30131.m007244
N
0.804
Aquca_014_00674
Aquilegia coerulea
Aquca_014_00674
N
0.781
cassava1375.valid.m1
Manihot esculenta
cassava1375.valid.m1
N
0.807
cassava1376.valid.m1
Manihot esculenta
cassava1376.valid.m1
N
0.807
cassava13860.valid.m1
Manihot esculenta
cassava13860.valid.m1
N
0.737
cassava20989.m1
Manihot esculenta
cassava20989.m1
N
0.783
cassava31043.valid.m1
Manihot esculenta
cassava31043.valid.m1
N
0.717
Ca_11133
Cicer arietinum
Ca_11133
N
0.721
Ca_27441
Cicer arietinum
Ca_27441
N
0.726
chr2.CM0018.90.nc
Lotus japonicus
chr2.CM0018.90.nc
N
0.721
chr3.CM0460.90.nd
Lotus japonicus
chr3.CM0460.90.nd
N
0.710
Ciclev10015219m.g
Citrus clementina
Ciclev10015219m.g
N
0.755
Ciclev10031389m.g
Citrus clementina
Ciclev10031389m.g
N
0.792
Cla020893
Citrullus lanatus
Cla020893
N
0.751
Cucsa.308180
Cucumis sativus
Cucsa.308180
N
0.755
Eucgr.B03716
Eucalyptus grandis
Eucgr.B03716
N
0.704
Eucgr.G03258
Eucalyptus grandis
Eucgr.G03258
N
0.781
evm.TU.supercontig_197.7
Carica papaya
evm.TU.supercontig_197.7
N
0.801
evm.TU.supercontig_84.12
Carica papaya
evm.TU.supercontig_84.12
N
0.753
gene14438-v1.0-hybrid
Fragaria vesca
gene14438-v1.0-hybrid
N
0.823
Gorai.006G125700
Gossypium raimondii
Gorai.006G125700
N
0.767
Gorai.012G080500
Gossypium raimondii
Gorai.012G080500
N
0.805
Gorai.013G015100
Gossypium raimondii
Gorai.013G015100
N
0.812
Lus10019773.g
Linum usitatissimum
Lus10019773.g
N
0.729
Lus10024177.g
Linum usitatissimum
Lus10024177.g
N
0.779
Lus10039562.g
Linum usitatissimum
Lus10039562.g
N
0.774
MTR_5g009080
Medicago truncatula
MTR_5g009080
N
0.723
orange1.1g011736m.g
Citrus sinensis
orange1.1g011736m.g
N
0.796
orange1.1g014413m.g
Citrus sinensis
orange1.1g014413m.g
N
0.755
PDK_20s1303935g001
Phoenix dactylifera
PDK_20s1303935g001
N
0.755
PGSC0003DMG400004649
Solanum tuberosum
PGSC0003DMG400004649
N
0.726
PK02707.1
Cannabis sativa
PK02707.1
N
0.803
Pm012190
Prunus mume
Pm012190
N
0.736
Pm016466
Prunus mume
Pm016466
N
1.000
Pm029840
Prunus mume
Pm029840
N
1.000
POPTR_0001s06090
Populus trichocarpa
POPTR_0001s06090
N
0.782
POPTR_0003s20100
Populus trichocarpa
POPTR_0003s20100
N
0.771
PRUPE_ppa005243mg
Prunus persica
PRUPE_ppa005243mg
N
0.733
SapurV1A.0009s0760
Salix purpurea
SapurV1A.0009s0760
N
0.782
SapurV1A.0415s0050
Salix purpurea
SapurV1A.0415s0050
N
0.732
SapurV1A.0504s0280
Salix purpurea
SapurV1A.0504s0280
N
0.766
SapurV1A.1723s0080
Salix purpurea
SapurV1A.1723s0080
N
0.780
SCL3
Vitis vinifera
VIT_06s0009g02390
N
0.759
SCL3
Populus trichocarpa
POPTR_0009s05330
N
0.748
Solyc12g099900.1
Solanum lycopersicum
Solyc12g099900.1
N
0.723
TCM_040833
Theobroma cacao
TCM_040833
N
0.781
TCM_042392
Theobroma cacao
TCM_042392
N
0.815
VIT_13s0019g01220
Vitis vinifera
VIT_13s0019g01220
N
0.798