ENSP00000251203-D1 (Bos grunniens)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 ENSP00000251203-D1 T225989_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PBX4
M00276_2.00 		Homo sapiens
NYTAATTADNN
NNHTAATTARN		 PBM
Barrera et al.(2016)
PBX4_R215Q 		0.810 0.930
PBX2
M08134_2.00 		Homo sapiens
NWGAKTGACABN
NVTGTCAMTCWN		 ChIP-seq
Mathelier et al.(2014)
MA1113.1 		0.710 0.930
PBX2
M09165_2.00 		Homo sapiens
KRVHKTGATTGAWKN
NMWTCAATCAMDBYM		 Misc
Kulakovskiy et al.(2013)
PBX2_HUMAN.H11MO.0.C 		0.710 0.930
Pbx2
M09199_2.00 		Mus musculus
KRVHKTGATTGAWKN
NMWTCAATCAMDBYM		 Misc
Kulakovskiy et al.(2013)
PBX2_MOUSE.H11MO.0.C 		0.710 0.930
pbx4
M02110_2.00 		Tetraodon nigroviridis
TTGAYGDV
BHCRTCAA		 PBM
Weirauch et al.(2014)
pTH6425 		0.710 0.912
Pbx1
M00513_2.00 		Mus musculus
NNDKANNNN
NNNNTMHNN		 PBM
Berger et al.(2008)
Pbx1_3203 		0.710 0.895
PBX1
M05362_2.00 		Homo sapiens
NTGATKGAYR
YRTCMATCAN		 SELEX
Yin et al.(2017)
PBX1_eDBD_HT-SELEX 		0.710 0.895
PBX1
M05364_2.00 		Homo sapiens
DTGMTKGRYN
NRYCMAKCAH		 SELEX
Yin et al.(2017)
PBX1_FL_HT-SELEX 		0.710 0.895
PBX1
M02685_2.00 		Homo sapiens
WWTGATTGATND
HNATCAATCAWW		 SELEX
Mathelier et al.(2014)
MA0070.1 		0.710 0.895
PBX1
M09164_2.00 		Homo sapiens
DGABTGRCRG
CYGYCAVTCH		 Misc
Kulakovskiy et al.(2013)
PBX1_HUMAN.H11MO.0.A 		0.710 0.895
PBX1
M09561_2.00 		Homo sapiens
TGABTGACAGSC
GSCTGTCAVTCA		 Misc
Heinz et al.(2010)
MCF7-PBX1_GSE28007 		0.710 0.895
PBX1
M10748_2.00 		Homo sapiens
WTKATTRDT
AHYAATMAW		 Transfac
Matys et al.(2006)
V$PBX1_01 		0.710 0.895
PBX1
M10749_2.00 		Homo sapiens
DNHTTGATTGATKDB
VHMATCAATCAADNH		 Transfac
Matys et al.(2006)
V$PBX1_02 		0.710 0.895
PBX1
M10750_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PBX1_03 		0.710 0.895
PBX1
M10751_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PBX1_05 		0.710 0.895
PBX1
M10752_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PBX1_10 		0.710 0.895
PBX1
M10753_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PBX1_Q3 		0.710 0.895
PBX1
M05363_2.00 		Homo sapiens
DTGAKKGAYG
CRTCMMTCAH		 SELEX
Yin et al.(2017)
PBX1_eDBD_Methyl-HT-SELEX 		0.710 0.895
PBX1
M05365_2.00 		Homo sapiens
MRTCAATCMH
DKGATTGAYK		 SELEX
Yin et al.(2017)
PBX1_FL_Methyl-HT-SELEX 		0.710 0.895
Pbx3
M09205_2.00 		Mus musculus
BBBTGATTGRYNDN
NHNRYCAATCAVVV		 Misc
Kulakovskiy et al.(2013)
PBX3_MOUSE.H11MO.0.A 		0.708 0.895
PBX4
M00277_2.00 		Homo sapiens
NNDDWHDNNN
NNNHDWHHNN		 PBM
Barrera et al.(2016)
PBX4_REF 		0.671 0.912
PBX4
M10649_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PBX4_01 		0.671 0.912
exd
M06487_2.00 		Drosophila melanogaster
YRTCAAAN
NTTTGAYR		 B1H
Mathelier et al.(2014)
MA0222.1 		0.665 0.912
exd
M06243_2.00 		Drosophila melanogaster
YRTCAAAN
NTTTGAYR		 B1H
Zhu et al.(2011)
Exd_Cell_FBgn0000611 		0.665 0.912
exd
M06244_2.00 		Drosophila melanogaster
NWRNWYNAAA
TTTNRWNYWN		 B1H
Zhu et al.(2011)
exd_FlyReg_FBgn0000611 		0.665 0.912
exd
M06245_2.00 		Drosophila melanogaster
NDTGAYRW
WYRTCAHN		 B1H
Zhu et al.(2011)
exd_SOLEXA_2_FBgn0000611 		0.665 0.912
exd
M06246_2.00 		Drosophila melanogaster
NNDTGAYR
YRTCAHNN		 B1H
Zhu et al.(2011)
Exd_SOLEXA_FBgn0000611 		0.665 0.912
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSP00000251203-D1 Homeodomain 171 230

Links

Other Homeodomain family TFs
Other Bos grunniens TFs

418 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
67303 Aureococcus anophagefferens 67303 N
68433 Aureococcus anophagefferens 68433 N
AAEL000771 Aedes aegypti AAEL000771 N
AALB009772 Anopheles albimanus AALB009772 N
AALB009867 Anopheles albimanus AALB009867 N
Aan_R006397 Calypte anna Aan_R006397 N
AARA000825 Anopheles arabiensis AARA000825 N
AATE015714 Anopheles atroparvus AATE015714 N
AATE016483 Anopheles atroparvus AATE016483 N
ACEP10857 Atta cephalotes ACEP10857 N
ACEP25851 Atta cephalotes ACEP25851 N
ACHR008996 Anopheles christyi ACHR008996 N
ACOM022799 Anopheles coluzzii ACOM022799 N
ACOM026653 Anopheles coluzzii ACOM026653 N
ACUA008827 Anopheles culicifacies ACUA008827 N
ACUA010594 Anopheles culicifacies ACUA010594 N
ACUA012732 Anopheles culicifacies ACUA012732 N
ADIR005631 Anopheles dirus ADIR005631 N
ADIR009661 Anopheles dirus ADIR009661 N
AEPI003629 Anopheles epiroticus AEPI003629 N
AEPI007652 Anopheles epiroticus AEPI007652 N
AEPI007948 Anopheles epiroticus AEPI007948 N
Afo_R011382 Aptenodytes forsteri Afo_R011382 N
Afo_R012388 Aptenodytes forsteri Afo_R012388 N
Afo_R012670 Aptenodytes forsteri Afo_R012670 N
AFUN006689 Anopheles funestus AFUN006689 N
AFUN009317 Anopheles funestus AFUN009317 N
AFUN010198 Anopheles funestus AFUN010198 N
AGAP028091 Anopheles gambiae AGAP028091 N
ALUE_0000245701 Ascaris lumbricoides ALUE_0000245701 N
ALUE_0000639901 Ascaris lumbricoides ALUE_0000639901 N
AMAM004028 Anopheles maculatus AMAM004028 N
AMAM023617 Anopheles maculatus AMAM023617 N
AMEC000538 Anopheles melas AMEC000538 I
AMEC007393 Anopheles melas AMEC007393 N
AMEC011653 Anopheles melas AMEC011653 N
AMEM002834 Anopheles merus AMEM002834 N
AMEM007694 Anopheles merus AMEM007694 N
AMIN001220 Anopheles minimus AMIN001220 N
AMIN009302 Anopheles minimus AMIN009302 N
ANCDUO_13942 Ancylostoma duodenale ANCDUO_13942 N
AQUA001261 Anopheles quadriannulatus AQUA001261 N
AQUA005880 Anopheles quadriannulatus AQUA005880 N
ASIS001889 Anopheles sinensis ASIS001889 N
ASTEI06131 Anopheles stephensi ASTEI06131 N
BGIBMGA003081 Bombyx mori BGIBMGA003081 N
BGLB010902 Biomphalaria glabrata BGLB010902 N
Brh_R004116 Buceros rhinoceros Brh_R004116 N
Brh_R007868 Buceros rhinoceros Brh_R007868 N
CBN19486 Caenorhabditis brenneri CBN19486 N
CBN25334 Caenorhabditis brenneri CBN25334 N
Cla016375 Citrullus lanatus Cla016375 N
CLEC006960 Cimex lectularius CLEC006960 N
CMQ_5875 Grosmannia clavigera CMQ_5875 N
Cmyd_10006594 Chelonia mydas Cmyd_10006594 N
CNM02020 Cryptococcus neoformans CNM02020 N
CPIJ012041 Culex quinquefasciatus CPIJ012041 N
CPIJ012498 Culex quinquefasciatus CPIJ012498 N
CPIJ014017 Culex quinquefasciatus CPIJ014017 N
CpipJ_CPIJ012041 Culex pipiens CpipJ_CPIJ012041 N
CpipJ_CPIJ012498 Culex pipiens CpipJ_CPIJ012498 N
CpipJ_CPIJ014017 Culex pipiens CpipJ_CPIJ014017 N
D918_08317 Trichuris suis D918_08317 N
DAPPUDRAFT_113704 Daphnia pulex DAPPUDRAFT_113704 N
DAPPUDRAFT_259784 Daphnia pulex DAPPUDRAFT_259784 N
DDB_G0287073 Dictyostelium discoideum DDB_G0287073 N
DILT_0001419401 Diphyllobothrium latum DILT_0001419401 N
ECPE_0001383301 Echinostoma caproni ECPE_0001383301 N
EDI_065970 Entamoeba dispar EDI_065970 N
EFA85451.1 Polysphondylium pallidum EFA85451.1 N
ENSAMXG00000017231 Astyanax mexicanus ENSAMXG00000017231 I
ENSAPLG00000003216 Anas platyrhynchos ENSAPLG00000003216 N
ENSAPLG00000008530 Anas platyrhynchos ENSAPLG00000008530 N
ENSAPLG00000010204 Anas platyrhynchos ENSAPLG00000010204 N
ENSAPLG00000013168 Anas platyrhynchos ENSAPLG00000013168 I
ENSBTAP00000027633-D1 Bos grunniens ENSBTAP00000027633-D1 I
ENSCSAG00000016751 Chlorocebus sabaeus ENSCSAG00000016751 N
ENSFALG00000011068 Ficedula albicollis ENSFALG00000011068 N
ENSFCAG00000015685 Felis catus ENSFCAG00000015685 I
ENSGALG00000023601 Gallus gallus ENSGALG00000023601 N
ENSLOCG00000011834 Lepisosteus oculatus ENSLOCG00000011834 I
ENSMGAG00000006336 Meleagris gallopavo ENSMGAG00000006336 N
ENSMGAG00000006624 Meleagris gallopavo ENSMGAG00000006624 N
ENSNLEG00000002693 Nomascus leucogenys ENSNLEG00000002693 N
ENSOANG00000002448 Ornithorhynchus anatinus ENSOANG00000002448 I
ENSOANG00000011188 Ornithorhynchus anatinus ENSOANG00000011188 I
ENSOARG00000000906 Ovis aries ENSOARG00000000906 I
ENSP00000409273 Macaca fascicularis ENSP00000409273 I
ENSPANG00000005859 Papio anubis ENSPANG00000005859 I
ENSPMAG00000004519 Petromyzon marinus ENSPMAG00000004519 N
ENSPSIG00000016857 Pelodiscus sinensis ENSPSIG00000016857 N
ENSSHAG00000008406 Sarcophilus harrisii ENSSHAG00000008406 I
ENSSTOG00000011011 Ictidomys tridecemlineatus ENSSTOG00000011011 I
ENSTSYG00000001164 Tarsius syrichta ENSTSYG00000001164 I
ENSTSYG00000006321 Tarsius syrichta ENSTSYG00000006321 I
ENSTTRG00000015548 Tursiops truncatus ENSTTRG00000015548 I
estExt_fgeneshDP_kg.C_1020010 Dictyostelium purpureum estExt_fgeneshDP_kg.C_1020010 N
F443_09320 Phytophthora parasitica F443_09320 N
fgenesh1_pg.C_scaffold_11000031 Sporobolomyces roseus fgenesh1_pg.C_scaffold_11000031 N
fgenesh1_pm.C_scaffold_23000166 Phytophthora capsici fgenesh1_pm.C_scaffold_23000166 N
fgenesh_scip_prom.28083.3150 Phytophthora lateralis fgenesh_scip_prom.28083.3150 N
GB40963 Apis mellifera GB40963 N
Gfo_R008143 Geospiza fortis Gfo_R008143 N
GLOINDRAFT_25375 Rhizophagus irregularis GLOINDRAFT_25375 N
GLOINDRAFT_271935 Rhizophagus irregularis GLOINDRAFT_271935 N
GLOINDRAFT_335861 Rhizophagus irregularis GLOINDRAFT_335861 N
GLOINDRAFT_346686 Rhizophagus irregularis GLOINDRAFT_346686 N
GLOINDRAFT_83691 Rhizophagus irregularis GLOINDRAFT_83691 N
GLOTRDRAFT_8101 Gloeophyllum trabeum GLOTRDRAFT_8101 N
GLYMA20G01570 Glycine max GLYMA20G01570 N
Gorai.005G106800 Gossypium raimondii Gorai.005G106800 N
GPLIN_000970900 Globodera pallida GPLIN_000970900 N
GPUH_0000499601 Gongylonema pulchrum GPUH_0000499601 N
Hba_21281 Heterorhabditis bacteriophora Hba_21281 N
HelroG68905 Helobdella robusta HelroG68905 N
HHAL000218-PA Halyomorpha halys HHAL000218-PA N
HHAL001293-PA Halyomorpha halys HHAL001293-PA N
HHAL001583-PA Halyomorpha halys HHAL001583-PA N
HMEL002398 Heliconius melpomene HMEL002398 I
HMEL013676 Heliconius melpomene HMEL013676 N
Hmg20b Mus musculus ENSMUSG00000020232 D
HmN_000301900 Hymenolepis microstoma HmN_000301900 N
Hsal_04827--XP_001122993.1_APIME Harpegnathos saltator Hsal_04827--XP_001122993.1_APIME N
Hsal_05005--XP_001122373.1_APIME Harpegnathos saltator Hsal_05005--XP_001122373.1_APIME N
ISCW001638 Ixodes scapularis ISCW001638 N
JL09_g5343 Pichia kudriavzevii JL09_g5343 N
K443DRAFT_58201 Laccaria amethystina K443DRAFT_58201 N
L798_00185 Zootermopsis nevadensis L798_00185 N
L798_05432 Zootermopsis nevadensis L798_05432 N
L798_12046 Zootermopsis nevadensis L798_12046 N
L898_g4879 Steinernema monticolum L898_g4879 N
LACBIDRAFT_169971 Laccaria bicolor LACBIDRAFT_169971 N
LbrM.21.1660 Leishmania braziliensis LbrM.21.1660 N
LCUP001586 Lucilia cuprina LCUP001586 N
LDEC017494 Leptinotarsa decemlineata LDEC017494 N
LDEC018263 Leptinotarsa decemlineata LDEC018263 N
LDEC019307 Leptinotarsa decemlineata LDEC019307 N
LotgiG143673 Lottia gigantea LotgiG143673 N
M404DRAFT_787968 Pisolithus tinctorius M404DRAFT_787968 N
M422DRAFT_54734 Sphaerobolus stellatus M422DRAFT_54734 N
M7I_1506 Glarea lozoyensis M7I_1506 N
MELLADRAFT_86211 Melampsora laricipopulina MELLADRAFT_86211 N
MESCA006364 Megaselia scalaris MESCA006364 N
MESCA012239 Megaselia scalaris MESCA012239 I
Minc18937 Meloidogyne incognita Minc18937 N
MPER_06248 Moniliophthora perniciosa MPER_06248 N
Myotis_brandtii_Hmgb2_10029741 Myotis brandtii Myotis_brandtii_Hmgb2_10029741 N
Myotis_brandtii_SOX2_10019709 Myotis brandtii Myotis_brandtii_SOX2_10019709 I
Myotis_brandtii_TFAM_10031378 Myotis brandtii Myotis_brandtii_TFAM_10031378 N
Myotis_brandtii_TIMM8A_10019481 Myotis brandtii Myotis_brandtii_TIMM8A_10019481 N
OESDEN_19415 Oesophagostomum dentatum OESDEN_19415 N
Ogr00751 Ophisaurus gracilis Ogr00751 I
Ogr08337 Ophisaurus gracilis Ogr08337 N
Ogr11176 Ophisaurus gracilis Ogr11176 N
Ogr13852 Ophisaurus gracilis Ogr13852 N
PEQ_0000549401 Parascaris equorum PEQ_0000549401 N
PHUM433280 Pediculus humanus PHUM433280 N
Phyra76615 Phytophthora ramorum Phyra76615 N
Physo127875 Phytophthora sojae Physo127875 N
PK00252.1 Cannabis sativa PK00252.1 N
PLEOSDRAFT_1017219 Pleurotus ostreatus PLEOSDRAFT_1017219 N
POSPLDRAFT_103238 Postia placenta POSPLDRAFT_103238 N
PPA11045 Pristionchus pacificus PPA11045 N
PPAI003639 Phlebotomus papatasi PPAI003639 N
PPAI005428 Phlebotomus papatasi PPAI005428 N
PredSwiss_ASS2010_3779.1 Pneumocystis carinii PredSwiss_ASS2010_3779.1 N
PredSwiss_CON1835.1 Pneumocystis carinii PredSwiss_CON1835.1 N
PSEUBRA_SCAF2g02551 Pseudozyma brasiliensis PSEUBRA_SCAF2g02551 N
PXEA_0002992801 Protopolystoma xenopodis PXEA_0002992801 N
RPRC001038 Rhodnius prolixus RPRC001038 N
SapurV1A.0237s0190 Salix purpurea SapurV1A.0237s0190 N
SCLCIDRAFT_59496 Scleroderma citrinum SCLCIDRAFT_59496 N
SINV16572 Solenopsis invicta SINV16572 N
SINV19749 Solenopsis invicta SINV19749 N
SINV24165 Solenopsis invicta SINV24165 N
Sjc_0107520 Schistosoma japonicum Sjc_0107520 N
SMAR007058 Strigamia maritima SMAR007058 N
SMAR010125 Strigamia maritima SMAR010125 N
SMU15030186 Schmidtea mediterranea SMU15030186 N
sox-2 Caenorhabditis elegans WBGene00004949 I
SOX10 Echinops telfairi ENSETEG00000012633 I
SOX12 Dasypus novemcinctus ENSDNOG00000044763 N
Sox17 Mus musculus ENSMUSG00000025902 D
SOX17 Sorex araneus ENSSARG00000009573 I
SOX18 Callithrix jacchus ENSCJAG00000022379 N
SOX18 Dasypus novemcinctus ENSDNOG00000036237 N
SOX18 Procavia capensis ENSPCAG00000015663 N
SOX18 Pan troglodytes ENSPTRG00000030459 I
SOX2 Felis catus ENSFCAG00000029205 I
SOX2 Procavia capensis ENSPCAG00000003690 I
SOX8 Callithrix jacchus ENSCJAG00000002684 I
SOX8 Equus caballus ENSECAG00000016320 I
SOX8 Echinops telfairi ENSETEG00000015470 N
SOX8 Felis catus ENSFCAG00000004219 N
SOX8 Microcebus murinus ENSMICG00000011516 I
SOX9 Echinops telfairi ENSETEG00000020237 I
SOX9 Myotis lucifugus ENSMLUG00000030312 I
SOX9 Tupaia belangeri ENSTBEG00000000175 N
sox9a Tetraodon nigroviridis ENSTNIG00000001901 N
SPER_0001708101 Spirometra erinaceieuropaei SPER_0001708101 N
SPER_0001952401 Spirometra erinaceieuropaei SPER_0001952401 N
TC009856 Tribolium castaneum TC009856 N
TcIL3000.10.440 Trypanosoma congolense TcIL3000.10.440 N
TCNE_0000669501 Toxocara canis TCNE_0000669501 N
TRE_0000259001 Trichobilharzia regenti TRE_0000259001 N
TVAG_114290 Trichomonas vaginalis TVAG_114290 N
TVAG_390840 Trichomonas vaginalis TVAG_390840 N
UCREL1_237 Eutypa lata UCREL1_237 N
UCREL1_749 Eutypa lata UCREL1_749 N
VDBG_04936 Verticillium albo atrum VDBG_04936 N
VDBG_04936 Verticillium alfalfae VDBG_04936 N
WALSEDRAFT_59420 Wallemia sebi WALSEDRAFT_59420 N
WUBG_10398 Wuchereria bancrofti WUBG_10398 N
WUBG_12101 Wuchereria bancrofti WUBG_12101 N
yakG000714 Bos grunniens yakG000714 N
YQE_03817 Dendroctonus ponderosae YQE_03817 N
YQE_08562 Dendroctonus ponderosae YQE_08562 N
YQE_13041 Dendroctonus ponderosae YQE_13041 N