MhA1_Contig878.frz3.gene2 (Meloidogyne hapla)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 MhA1_Contig878.frz3.gene2 T235161_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
VSX1
M03087_2.00 		Homo sapiens
YTAATTAN
NTAATTAR		 SELEX
Jolma et al.(2013)
VSX1_1 		0.750 0.465
VSX1
M03088_2.00 		Homo sapiens
NNYAATTRRBN
NVYYAATTRNN		 SELEX
Jolma et al.(2013)
VSX1_2 		0.750 0.465
VSX1
M04941_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
VSX1_eDBD_HT-SELEX 		0.750 0.465
VSX1
M04944_2.00 		Homo sapiens
NTAATTRS
SYAATTAN		 SELEX
Yin et al.(2017)
VSX1_FL_HT-SELEX 		0.750 0.465
VSX1
M05869_2.00 		Homo sapiens
DGCTAATTAN
NTAATTAGCH		 SMiLE-seq
Isakova et al.(2017)
VSX1 		0.750 0.465
VSX1
M04942_2.00 		Homo sapiens
NTAAYGMN
NKCRTTAN		 SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_1 		0.750 0.465
VSX1
M04943_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_2 		0.750 0.465
VSX1
M04945_2.00 		Homo sapiens
NTAATTRG
CYAATTAN		 SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_1 		0.750 0.465
VSX1
M04946_2.00 		Homo sapiens
NTAAYGAN
NTCRTTAN		 SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_2 		0.750 0.465
VAX1
M03168_2.00 		Homo sapiens
YTAATKAN
NTMATTAR		 SELEX
Jolma et al.(2013)
VAX1_1 		0.742 0.442
VAX1
M05182_2.00 		Homo sapiens
BTAATTRN
NYAATTAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_HT-SELEX 		0.742 0.442
VAX1
M05183_2.00 		Homo sapiens
BTMATKRN
NYMATKAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_Methyl-HT-SELEX 		0.742 0.442
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MhA1_Contig878.frz3.gene2 Homeodomain 108 150

Links

Other Homeodomain family TFs
Other Meloidogyne hapla TFs

1253 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O9_05704 Exophiala aquamarina A1O9_05704 N
AAEL000771 Aedes aegypti AAEL000771 N
AALB009772 Anopheles albimanus AALB009772 N
AALB009867 Anopheles albimanus AALB009867 N
AARA000825 Anopheles arabiensis AARA000825 N
AATE015714 Anopheles atroparvus AATE015714 N
AATE016483 Anopheles atroparvus AATE016483 N
ACEP10857 Atta cephalotes ACEP10857 N
ACEP25851 Atta cephalotes ACEP25851 N
ACHR008996 Anopheles christyi ACHR008996 N
ACOM022799 Anopheles coluzzii ACOM022799 N
ACOM026653 Anopheles coluzzii ACOM026653 N
ACOM029353 Anopheles coluzzii ACOM029353 I
ACUA008827 Anopheles culicifacies ACUA008827 N
ACUA010594 Anopheles culicifacies ACUA010594 N
ACUA012732 Anopheles culicifacies ACUA012732 N
ADIR005631 Anopheles dirus ADIR005631 N
ADIR009661 Anopheles dirus ADIR009661 N
AEPI003629 Anopheles epiroticus AEPI003629 N
AEPI007652 Anopheles epiroticus AEPI007652 N
AEPI007948 Anopheles epiroticus AEPI007948 N
Afo_R012388 Aptenodytes forsteri Afo_R012388 N
Afo_R012670 Aptenodytes forsteri Afo_R012670 N
AFUN006689 Anopheles funestus AFUN006689 N
AFUN009317 Anopheles funestus AFUN009317 N
AFUN010198 Anopheles funestus AFUN010198 N
AGAP028091 Anopheles gambiae AGAP028091 N
Alligator_sinensis_CCG005706.1 Alligator sinensis Alligator_sinensis_CCG005706.1 I
ALUE_0000245701 Ascaris lumbricoides ALUE_0000245701 N
ALUE_0000639901 Ascaris lumbricoides ALUE_0000639901 N
AMAM004028 Anopheles maculatus AMAM004028 N
AMAM023617 Anopheles maculatus AMAM023617 N
AMEC000538 Anopheles melas AMEC000538 I
AMEC007393 Anopheles melas AMEC007393 N
AMEC011653 Anopheles melas AMEC011653 N
AMEM002834 Anopheles merus AMEM002834 N
AMEM007694 Anopheles merus AMEM007694 N
AMIN001220 Anopheles minimus AMIN001220 N
AMIN009302 Anopheles minimus AMIN009302 N
ANCCEY_05256 Ancylostoma ceylanicum ANCCEY_05256 I
AOL_s00081g337 Arthrobotrys oligospora AOL_s00081g337 N
AQUA001261 Anopheles quadriannulatus AQUA001261 N
AQUA005880 Anopheles quadriannulatus AQUA005880 N
ASIS001889 Anopheles sinensis ASIS001889 N
ASTEI06131 Anopheles stephensi ASTEI06131 N
ASTEI06408 Anopheles stephensi ASTEI06408 N
AWRI1499_3370 Brettanomyces bruxellensis AWRI1499_3370 N
BGIBMGA003081 Bombyx mori BGIBMGA003081 N
BGLB010902 Biomphalaria glabrata BGLB010902 N
BN7_5034 Wickerhamomyces ciferrii BN7_5034 N
BOTBODRAFT_575781 Botryobasidium botryosum BOTBODRAFT_575781 N
Brh_R004116 Buceros rhinoceros Brh_R004116 N
Brh_R008736 Buceros rhinoceros Brh_R008736 I
CAA46605 Xenopus laevis CAA46605 N
CAA46607 Xenopus laevis CAA46607 N
CaO19.1731 Candida albicans CaO19.1731 N
CaO19.9299 Candida albicans CaO19.9299 N
Ca_14341 Cicer arietinum Ca_14341 N
CC1G_07924 Coprinopsis cinerea CC1G_07924 N
CFIO01_04514 Colletotrichum fioriniae CFIO01_04514 N
CLEC006960 Cimex lectularius CLEC006960 N
Cmyd_10006594 Chelonia mydas Cmyd_10006594 N
CNM02020 Cryptococcus neoformans CNM02020 N
CPIJ012041 Culex quinquefasciatus CPIJ012041 N
CPIJ012498 Culex quinquefasciatus CPIJ012498 N
CPIJ014017 Culex quinquefasciatus CPIJ014017 N
CpipJ_CPIJ012041 Culex pipiens CpipJ_CPIJ012041 N
CpipJ_CPIJ012498 Culex pipiens CpipJ_CPIJ012498 N
CpipJ_CPIJ014017 Culex pipiens CpipJ_CPIJ014017 N
csin108932 Clonorchis sinensis csin108932 I
D915_00082 Fasciola hepatica D915_00082 I
D915_01276 Fasciola hepatica D915_01276 N
D915_11240 Fasciola hepatica D915_11240 N
D918_08317 Trichuris suis D918_08317 N
DAPPUDRAFT_113704 Daphnia pulex DAPPUDRAFT_113704 N
DICVIV_12599 Dictyocaulus viviparus DICVIV_12599 I
DRE_00029 Drechslerella stenobrocha DRE_00029 N
D_00260 Schistosoma haematobium D_00260 I
ECPE_0001194001 Echinostoma caproni ECPE_0001194001 N
EFA85451.1 Polysphondylium pallidum EFA85451.1 N
ENSAMXG00000003325 Astyanax mexicanus ENSAMXG00000003325 N
ENSAMXG00000017231 Astyanax mexicanus ENSAMXG00000017231 I
ENSAPLG00000003216 Anas platyrhynchos ENSAPLG00000003216 N
ENSAPLG00000010204 Anas platyrhynchos ENSAPLG00000010204 N
ENSAPLG00000013168 Anas platyrhynchos ENSAPLG00000013168 I
ENSBTAP00000027633-D1 Bos grunniens ENSBTAP00000027633-D1 I
ENSCSAG00000016751 Chlorocebus sabaeus ENSCSAG00000016751 N
ENSECAG00000006516 Equus caballus ENSECAG00000006516 I
ENSFCAG00000015685 Felis catus ENSFCAG00000015685 I
ENSLOCG00000011834 Lepisosteus oculatus ENSLOCG00000011834 I
ENSMGAG00000006624 Meleagris gallopavo ENSMGAG00000006624 N
ENSOANG00000002448 Ornithorhynchus anatinus ENSOANG00000002448 I
ENSOANG00000011188 Ornithorhynchus anatinus ENSOANG00000011188 I
ENSOARG00000000906 Ovis aries ENSOARG00000000906 I
ENSP00000322568 Macaca fascicularis ENSP00000322568 I
ENSP00000409273 Macaca fascicularis ENSP00000409273 I
ENSPANG00000005859 Papio anubis ENSPANG00000005859 I
ENSPFOG00000015998 Poecilia formosa ENSPFOG00000015998 I
ENSSHAG00000008406 Sarcophilus harrisii ENSSHAG00000008406 I
ENSSTOG00000011011 Ictidomys tridecemlineatus ENSSTOG00000011011 I
ENSTSYG00000001164 Tarsius syrichta ENSTSYG00000001164 I
ENSTSYG00000006321 Tarsius syrichta ENSTSYG00000006321 I
ENSTTRG00000015548 Tursiops truncatus ENSTTRG00000015548 I
e_gw.60.194.1 Branchiostoma floridae e_gw.60.194.1 N
fgenesh1_pg.C_scaffold_11000031 Sporobolomyces roseus fgenesh1_pg.C_scaffold_11000031 N
fgenesh1_pg.sca_3_chr4_2_0000426 Nectria haematococca fgenesh1_pg.sca_3_chr4_2_0000426 N
GB40963 Apis mellifera GB40963 N
GD17533 Drosophila simulans FBgn0189083 N
Gfo_R006305 Geospiza fortis Gfo_R006305 I
GL15054 Drosophila persimilis FBgn0152658 N
GLOINDRAFT_25375 Rhizophagus irregularis GLOINDRAFT_25375 N
GLOINDRAFT_31865 Rhizophagus irregularis GLOINDRAFT_31865 N
GLOINDRAFT_323774 Rhizophagus irregularis GLOINDRAFT_323774 N
GLOINDRAFT_346686 Rhizophagus irregularis GLOINDRAFT_346686 N
GLOINDRAFT_83691 Rhizophagus irregularis GLOINDRAFT_83691 N
GLOTRDRAFT_8101 Gloeophyllum trabeum GLOTRDRAFT_8101 N
GPLIN_000596700 Globodera pallida GPLIN_000596700 I
GPLIN_000970900 Globodera pallida GPLIN_000970900 N
GPLIN_001405800 Globodera pallida GPLIN_001405800 I
GPUH_0000499601 Gongylonema pulchrum GPUH_0000499601 N
gw.110.115.1 Branchiostoma floridae gw.110.115.1 N
GYMLUDRAFT_143012 Gymnopus luxurians GYMLUDRAFT_143012 N
H072_9933 Dactylellina haptotyla H072_9933 N
Hba_21281 Heterorhabditis bacteriophora Hba_21281 N
HHAL000218-PA Halyomorpha halys HHAL000218-PA N
HHAL001293-PA Halyomorpha halys HHAL001293-PA N
HHAL001583-PA Halyomorpha halys HHAL001583-PA N
HMEL002398 Heliconius melpomene HMEL002398 I
HMEL006651 Heliconius melpomene HMEL006651 I
HMEL013676 Heliconius melpomene HMEL013676 N
Hsal_04827--XP_001122993.1_APIME Harpegnathos saltator Hsal_04827--XP_001122993.1_APIME N
Hsal_05005--XP_001122373.1_APIME Harpegnathos saltator Hsal_05005--XP_001122373.1_APIME N
HYDPIDRAFT_51400 Hydnomerulius pinastri HYDPIDRAFT_51400 N
ISCW001638 Ixodes scapularis ISCW001638 N
K443DRAFT_58201 Laccaria amethystina K443DRAFT_58201 N
KGM_19696 Danaus plexippus KGM_19696 I
L798_00185 Zootermopsis nevadensis L798_00185 N
L798_05432 Zootermopsis nevadensis L798_05432 N
L798_12046 Zootermopsis nevadensis L798_12046 N
L798_12049 Zootermopsis nevadensis L798_12049 I
L898_g4879 Steinernema monticolum L898_g4879 N
LACBIDRAFT_169971 Laccaria bicolor LACBIDRAFT_169971 N
LCUP001586 Lucilia cuprina LCUP001586 N
LDEC017494 Leptinotarsa decemlineata LDEC017494 N
LDEC018263 Leptinotarsa decemlineata LDEC018263 N
LDEC019307 Leptinotarsa decemlineata LDEC019307 N
LotgiG143673 Lottia gigantea LotgiG143673 N
M404DRAFT_787968 Pisolithus tinctorius M404DRAFT_787968 N
maker-nMf.1.1.scaf00287-augustus-gene-0.13 Meloidogyne floridensis maker-nMf.1.1.scaf00287-augustus-gene-0.13 I
MCINX010139 Melitaea cinxia MCINX010139 N
MCOS_0000919201 Mesocestoides corti MCOS_0000919201 N
MESCA006188 Megaselia scalaris MESCA006188 N
MESCA006364 Megaselia scalaris MESCA006364 N
MESCA012239 Megaselia scalaris MESCA012239 I
MPER_06248 Moniliophthora perniciosa MPER_06248 N
MTR_6g048860 Medicago truncatula MTR_6g048860 N
Myotis_brandtii_SOX21_10030218 Myotis brandtii Myotis_brandtii_SOX21_10030218 I
Myotis_brandtii_SOX2_10019709 Myotis brandtii Myotis_brandtii_SOX2_10019709 I
nAv.1.0.1.g07335 Acanthocheilonema viteae nAv.1.0.1.g07335 N
NBR_0000581201 Nippostrongylus brasiliensis NBR_0000581201 I
nDi.2.2.2.g09704 Dirofilaria immitis nDi.2.2.2.g09704 I
NechaG79025 Fusarium solani NechaG79025 N
Ogr00751 Ophisaurus gracilis Ogr00751 I
Ogr11176 Ophisaurus gracilis Ogr11176 N
PDIP_33190 Penicillium digitatum PDIP_33190 N
PEQ_0000549401 Parascaris equorum PEQ_0000549401 N
PEX1_064750 Penicillium expansum PEX1_064750 N
PFICI_02946 Pestalotiopsis fici PFICI_02946 N
PHUM433280 Pediculus humanus PHUM433280 N
PLEOSDRAFT_1017219 Pleurotus ostreatus PLEOSDRAFT_1017219 N
PLICRDRAFT_78649 Plicaturopsis crispa PLICRDRAFT_78649 N
POSPLDRAFT_103238 Postia placenta POSPLDRAFT_103238 N
POSPLDRAFT_104634 Postia placenta POSPLDRAFT_104634 N
Ppa-sox-2 Pristionchus pacificus PPA07024 I
PPAI003639 Phlebotomus papatasi PPAI003639 N
PPAI005428 Phlebotomus papatasi PPAI005428 N
PredSwiss_ASS2010_3779.1 Pneumocystis carinii PredSwiss_ASS2010_3779.1 N
PredSwiss_ASS2010_4422.1 Pneumocystis carinii PredSwiss_ASS2010_4422.1 N
PredSwiss_CON1835.1 Pneumocystis carinii PredSwiss_CON1835.1 N
PSEUBRA_SCAF2g02551 Pseudozyma brasiliensis PSEUBRA_SCAF2g02551 N
PTTG_00444 Puccinia triticina PTTG_00444 N
PXEA_0000763901 Protopolystoma xenopodis PXEA_0000763901 N
PXEA_0002992801 Protopolystoma xenopodis PXEA_0002992801 N
RPRC001038 Rhodnius prolixus RPRC001038 N
RPRC013413 Rhodnius prolixus RPRC013413 N
SCLCIDRAFT_59496 Scleroderma citrinum SCLCIDRAFT_59496 N
SCUD_0001126301 Schistosoma curassoni SCUD_0001126301 N
SERLA73DRAFT_139986 Serpula lacrymans SERLA73DRAFT_139986 N
SINV16572 Solenopsis invicta SINV16572 N
SINV19749 Solenopsis invicta SINV19749 N
SINV24165 Solenopsis invicta SINV24165 N
Sjc_0107520 Schistosoma japonicum Sjc_0107520 N
SMAR007058 Strigamia maritima SMAR007058 N
SMAR010125 Strigamia maritima SMAR010125 N
Smp_179780 Schistosoma mansoni Smp_179780 I
SMRZ_0002061501 Schistosoma margrebowiei SMRZ_0002061501 N
SMTD_0001685201 Schistosoma mattheei SMTD_0001685201 N
SMU15030186 Schmidtea mediterranea SMU15030186 N
sox-2 Caenorhabditis elegans WBGene00004949 I
SOX10 Echinops telfairi ENSETEG00000012633 I
SOX12 Dasypus novemcinctus ENSDNOG00000044763 N
sox13.S Xenopus laevis XB-GENE-865496 I
Sox17 Mus musculus ENSMUSG00000025902 D
SOX17 Sorex araneus ENSSARG00000009573 I
SOX18 Callithrix jacchus ENSCJAG00000022379 N
SOX18 Dasypus novemcinctus ENSDNOG00000036237 N
SOX18 Procavia capensis ENSPCAG00000015663 N
SOX18 Pan troglodytes ENSPTRG00000030459 I
SOX2 Felis catus ENSFCAG00000029205 I
SOX2 Procavia capensis ENSPCAG00000003690 I
sox5.S Xenopus laevis XB-GENE-865667 I
SOX8 Callithrix jacchus ENSCJAG00000002684 I
SOX8 Equus caballus ENSECAG00000016320 I
SOX8 Echinops telfairi ENSETEG00000015470 N
SOX8 Felis catus ENSFCAG00000004219 N
SOX8 Microcebus murinus ENSMICG00000011516 I
SOX9 Echinops telfairi ENSETEG00000020237 I
SOX9 Myotis lucifugus ENSMLUG00000030312 I
SOX9 Tupaia belangeri ENSTBEG00000000175 N
sox9a Tetraodon nigroviridis ENSTNIG00000001901 N
SPER_0001708101 Spirometra erinaceieuropaei SPER_0001708101 N
SPER_0001952401 Spirometra erinaceieuropaei SPER_0001952401 N
SVUK_0000774301 Strongylus vulgaris SVUK_0000774301 I
T265_14506 Opisthorchis viverrini T265_14506 I
TC009856 Tribolium castaneum TC009856 N
TELCIR_00631 Teladorsagia circumcincta TELCIR_00631 I
Thaps7519 Thalassiosira pseudonana Thaps7519 N
TRE_0000259001 Trichobilharzia regenti TRE_0000259001 N
TTAC_0001064401 Hydatigera taeniaeformis TTAC_0001064401 N
TVAG_390840 Trichomonas vaginalis TVAG_390840 N
UCREL1_237 Eutypa lata UCREL1_237 N
UCREL1_469 Eutypa lata UCREL1_469 N
UCREL1_749 Eutypa lata UCREL1_749 N
WALSEDRAFT_27096 Wallemia sebi WALSEDRAFT_27096 N
WALSEDRAFT_59420 Wallemia sebi WALSEDRAFT_59420 N
WUBG_10398 Wuchereria bancrofti WUBG_10398 N
XP_002170844.1 Hydra magnipapillata XP_002170844.1 I
XP_002935940 Xenopus tropicalis XP_002935940 N
YQE_03817 Dendroctonus ponderosae YQE_03817 N
YQE_08562 Dendroctonus ponderosae YQE_08562 N
YQE_13041 Dendroctonus ponderosae YQE_13041 N