HMG20B (Pteropus vampyrus)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 ENSPVAG00000004300 T329008_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Hmg20b
M02487_2.00 		Mus musculus
NNATTATWHWN
NWDWATAATNN		 PBM
Weirauch et al.(2014)
pTH8555 		0.533 0.803
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPVAP00000004069 Sox 70 135

Links

Other Sox family TFs
Other Pteropus vampyrus TFs

133 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R011684 Calypte anna Aan_R011684 I 0.556
Aan_R011791 Calypte anna Aan_R011791 I 0.437
Afo_R007008 Aptenodytes forsteri Afo_R007008 I 0.437
Afo_R007636 Aptenodytes forsteri Afo_R007636 I 0.556
Alligator_sinensis_CCG000441.1 Alligator sinensis Alligator_sinensis_CCG000441.1 I 0.556
Alligator_sinensis_CCG010545.1 Alligator sinensis Alligator_sinensis_CCG010545.1 I 0.437
Brh_R011859 Buceros rhinoceros Brh_R011859 I 0.437
Cmyd_10002377 Chelonia mydas Cmyd_10002377 I 0.556
Cmyd_10009674 Chelonia mydas Cmyd_10009674 I 0.420
Cmyd_10010094 Chelonia mydas Cmyd_10010094 I 0.437
eef2l2 Takifugu rubripes ENSTRUG00000017921 I 0.473
ENSAMEG00000005678 Ailuropoda melanoleuca ENSAMEG00000005678 I 0.561
ENSAMEG00000008348 Ailuropoda melanoleuca ENSAMEG00000008348 I 0.445
ENSAMXG00000013048 Astyanax mexicanus ENSAMXG00000013048 I 0.415
ENSAMXG00000017986 Astyanax mexicanus ENSAMXG00000017986 I 0.541
ENSAPLG00000005528 Anas platyrhynchos ENSAPLG00000005528 I 0.556
ENSAPLG00000015603 Anas platyrhynchos ENSAPLG00000015603 I 0.437
ENSBTAG00000047668 Bos taurus ENSBTAG00000047668 I 0.561
ENSCSAG00000011140 Chlorocebus sabaeus ENSCSAG00000011140 I 0.561
ENSCSAG00000014734 Chlorocebus sabaeus ENSCSAG00000014734 I 0.445
ENSDORG00000012598 Dipodomys ordii ENSDORG00000012598 I 0.554
ENSFALG00000010751 Ficedula albicollis ENSFALG00000010751 I 0.437
ENSFALG00000011609 Ficedula albicollis ENSFALG00000011609 I 0.556
ENSGALG00000002746 Gallus gallus ENSGALG00000002746 I 0.437
ENSGMOG00000011717 Gadus morhua ENSGMOG00000011717 I 0.469
ENSGMOG00000015452 Gadus morhua ENSGMOG00000015452 I 0.415
ENSLACG00000004599 Latimeria chalumnae ENSLACG00000004599 I 0.452
ENSLOCG00000014255 Lepisosteus oculatus ENSLOCG00000014255 I 0.444
ENSMEUG00000001270 Macropus eugenii ENSMEUG00000001270 I 0.556
ENSMEUG00000016429 Macropus eugenii ENSMEUG00000016429 I 0.445
ENSMPUG00000003925 Mustela putorius furo ENSMPUG00000003925 I 0.561
ENSMPUG00000017330 Mustela putorius furo ENSMPUG00000017330 I 0.445
ENSNLEG00000008357 Nomascus leucogenys ENSNLEG00000008357 I 0.445
ENSOARG00000001765 Ovis aries ENSOARG00000001765 I 0.445
ENSOARG00000005838 Ovis aries ENSOARG00000005838 I 0.424
ENSOARG00000012318 Ovis aries ENSOARG00000012318 I 0.561
ENSONIG00000004838 Oreochromis niloticus ENSONIG00000004838 I 0.473
ENSONIG00000012862 Oreochromis niloticus ENSONIG00000012862 I 0.415
ENSP00000336856-D1 Bos grunniens ENSP00000336856-D1 I 0.445
ENSP00000371133 Macaca fascicularis ENSP00000371133 I 0.445
ENSPANG00000010575 Papio anubis ENSPANG00000010575 I 0.561
ENSPANG00000015844 Papio anubis ENSPANG00000015844 I 0.445
ENSPFOG00000003017 Poecilia formosa ENSPFOG00000003017 I 0.473
ENSPFOG00000014087 Poecilia formosa ENSPFOG00000014087 I 0.415
ENSPPYG00000006683 Pongo abelii ENSPPYG00000006683 I 0.445
ENSPPYG00000009378 Pongo abelii ENSPPYG00000009378 I 0.561
ENSPSIG00000010923 Pelodiscus sinensis ENSPSIG00000010923 I 0.556
ENSPSIG00000013006 Pelodiscus sinensis ENSPSIG00000013006 I 0.437
ENSSHAG00000007226 Sarcophilus harrisii ENSSHAG00000007226 I 0.556
ENSSHAG00000012311 Sarcophilus harrisii ENSSHAG00000012311 I 0.445
ENSSSCG00000024002 Sus scrofa ENSSSCG00000024002 I 0.445
ENSSTOG00000013818 Ictidomys tridecemlineatus ENSSTOG00000013818 I 0.445
ENSSTOG00000022314 Ictidomys tridecemlineatus ENSSTOG00000022314 I 0.561
ENSTSYG00000003485 Tarsius syrichta ENSTSYG00000003485 I 0.445
ENSXMAG00000000587 Xiphophorus maculatus ENSXMAG00000000587 I 0.415
ENSXMAG00000012647 Xiphophorus maculatus ENSXMAG00000012647 I 0.473
estExt_fgenesh2_pg.C_2300011 Branchiostoma floridae estExt_fgenesh2_pg.C_2300011 I 0.446
estExt_fgenesh2_pg.C_2300014 Branchiostoma floridae estExt_fgenesh2_pg.C_2300014 I 0.446
Gfo_R007604 Geospiza fortis Gfo_R007604 I 0.556
HMG20A Anolis carolinensis ENSACAG00000011520 I 0.437
HMG20A Bos taurus ENSBTAG00000020441 I 0.445
HMG20A Canis familiaris ENSCAFG00000018061 I 0.445
HMG20A Choloepus hoffmanni ENSCHOG00000012116 I 0.445
HMG20A Callithrix jacchus ENSCJAG00000011131 I 0.445
HMG20A Cavia porcellus ENSCPOG00000011704 I 0.445
hmg20a Danio rerio ENSDARG00000031198 I 0.437
HMG20A Dasypus novemcinctus ENSDNOG00000034143 I 0.445
Hmg20a Dipodomys ordii ENSDORG00000000623 I 0.445
HMG20A Erinaceus europaeus ENSEEUG00000004472 I 0.445
HMG20A Echinops telfairi ENSETEG00000015812 I 0.445
HMG20A Felis catus ENSFCAG00000022539 I 0.445
HMG20A Homo sapiens ENSG00000140382 I 0.445
hmg20a Gasterosteus aculeatus ENSGACG00000003466 I 0.415
HMG20A Gorilla gorilla ENSGGOG00000008439 I 0.445
HMG20A Loxodonta africana ENSLAFG00000018273 I 0.445
HMG20A Meleagris gallopavo ENSMGAG00000003179 I 0.437
HMG20A Microcebus murinus ENSMICG00000011025 I 0.445
HMG20A Myotis lucifugus ENSMLUG00000011648 I 0.445
HMG20A Macaca mulatta ENSMMUG00000007430 I 0.445
HMG20A Monodelphis domestica ENSMODG00000012113 I 0.445
Hmg20a Mus musculus ENSMUSG00000032329 I 0.445
HMG20A Ornithorhynchus anatinus ENSOANG00000009993 I 0.445
HMG20A Oryctolagus cuniculus ENSOCUG00000005648 I 0.445
HMG20A Otolemur garnettii ENSOGAG00000006630 I 0.445
hmg20a Oryzias latipes ENSORLG00000001794 I 0.415
HMG20A Procavia capensis ENSPCAG00000013879 I 0.445
HMG20A Pan troglodytes ENSPTRG00000007326 I 0.445
Hmg20a Rattus norvegicus ENSRNOG00000016905 I 0.445
HMG20A Sorex araneus ENSSARG00000012609 I 0.445
HMG20A Sus scrofa ENSSSCG00000001871 I 0.445
HMG20A Tupaia belangeri ENSTBEG00000015283 I 0.445
HMG20A Taeniopygia guttata ENSTGUG00000003690 I 0.437
hmg20a Tetraodon nigroviridis ENSTNIG00000008460 I 0.415
hmg20a Takifugu rubripes ENSTRUG00000016127 I 0.415
HMG20A Tursiops truncatus ENSTTRG00000006500 I 0.445
HMG20A Vicugna pacos ENSVPAG00000010013 I 0.445
hmg20a Xenopus tropicalis XB-GENE-955353 I 0.446
hmg20a.L Xenopus laevis XB-GENE-955359 I 0.446
HMG20B Canis familiaris ENSCAFG00000019215 I 0.561
HMG20B Callithrix jacchus ENSCJAG00000003488 I 0.552
HMG20B Cavia porcellus ENSCPOG00000010777 I 0.561
hmg20b Danio rerio ENSDARG00000042045 I 0.541
HMG20B Felis catus ENSFCAG00000026167 I 0.561
HMG20B Homo sapiens ENSG00000064961 I 0.561
hmg20b Gasterosteus aculeatus ENSGACG00000012785 I 0.473
HMG20B Gallus gallus ENSGALG00000027838 I 0.556
HMG20B Gorilla gorilla ENSGGOG00000014805 I 0.561
HMG20B Loxodonta africana ENSLAFG00000007845 I 0.561
HMG20B Meleagris gallopavo ENSMGAG00000001362 I 0.556
HMG20B Myotis lucifugus ENSMLUG00000022392 I 0.561
HMG20B Monodelphis domestica ENSMODG00000006884 I 0.556
Hmg20b Mus musculus ENSMUSG00000020232 D 0.533
HMG20B Ornithorhynchus anatinus ENSOANG00000013515 I 0.556
HMG20B Otolemur garnettii ENSOGAG00000014171 I 0.561
hmg20b Oryzias latipes ENSORLG00000004640 I 0.473
HMG20B Procavia capensis ENSPCAG00000010772 I 0.561
HMG20B Pan troglodytes ENSPTRG00000010268 I 0.480
Hmg20b Rattus norvegicus ENSRNOG00000020601 I 0.533
HMG20B Taeniopygia guttata ENSTGUG00000000169 I 0.556
hmg20b Tetraodon nigroviridis ENSTNIG00000010630 I 0.473
HMG20B Tursiops truncatus ENSTTRG00000008832 I 0.561
hmg20b Xenopus tropicalis XB-GENE-5809048 I 0.549
hmg20b.L Xenopus laevis XB-GENE-5809135 I 0.549
hmg20b.S Xenopus laevis XB-GENE-17338323 I 0.549
Myotis_brandtii_HMG20A_10005450 Myotis brandtii Myotis_brandtii_HMG20A_10005450 I 0.445
Myotis_brandtii_HMG20B_10016321 Myotis brandtii Myotis_brandtii_HMG20B_10016321 I 0.561
NEMVEDRAFT_v1g105457 Nematostella vectensis NEMVEDRAFT_v1g105457 I 0.417
NEMVEDRAFT_v1g87244 Nematostella vectensis NEMVEDRAFT_v1g87244 I 0.415
Pvit_01997 Pogona vitticeps Pvit_01997 I 0.437
Pvit_08123 Pogona vitticeps Pvit_08123 I 0.556
Tal_R006697 Tyto alba Tal_R006697 I 0.437
XP_002158984.1 Hydra magnipapillata XP_002158984.1 I 0.415
XP_002161760.1 Hydra magnipapillata XP_002161760.1 I 0.415