ENSGMOG00000011717 (Gadus morhua)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 ENSGMOG00000011717 T328201_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Hmg20b
M02487_2.00 		Mus musculus
NNATTATWHWN
NWDWATAATNN		 PBM
Weirauch et al.(2014)
pTH8555 		0.649 0.768
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSGMOP00000012533 Sox 21 89

Links

Other Sox family TFs
Other Gadus morhua TFs

170 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
hmg20b Gasterosteus aculeatus ENSGACG00000012785 I 0.717
ENSONIG00000004838 Oreochromis niloticus ENSONIG00000004838 I 0.717
hmg20b Oryzias latipes ENSORLG00000004640 I 0.717
ENSPFOG00000003017 Poecilia formosa ENSPFOG00000003017 I 0.717
hmg20b Tetraodon nigroviridis ENSTNIG00000010630 I 0.717
eef2l2 Takifugu rubripes ENSTRUG00000017921 I 0.717
ENSXMAG00000012647 Xiphophorus maculatus ENSXMAG00000012647 I 0.717
ENSAMXG00000017986 Astyanax mexicanus ENSAMXG00000017986 I 0.657
HMG20B Callithrix jacchus ENSCJAG00000003488 I 0.657
hmg20b Danio rerio ENSDARG00000042045 I 0.657
ENSAPLG00000005528 Anas platyrhynchos ENSAPLG00000005528 I 0.654
ENSFALG00000011609 Ficedula albicollis ENSFALG00000011609 I 0.654
HMG20B Gallus gallus ENSGALG00000027838 I 0.654
HMG20B Meleagris gallopavo ENSMGAG00000001362 I 0.654
ENSPSIG00000010923 Pelodiscus sinensis ENSPSIG00000010923 I 0.654
HMG20B Taeniopygia guttata ENSTGUG00000000169 I 0.654
Aan_R011684 Calypte anna Aan_R011684 I 0.654
Afo_R007636 Aptenodytes forsteri Afo_R007636 I 0.654
Alligator_sinensis_CCG000441.1 Alligator sinensis Alligator_sinensis_CCG000441.1 I 0.654
Cmyd_10002377 Chelonia mydas Cmyd_10002377 I 0.654
Gfo_R007604 Geospiza fortis Gfo_R007604 I 0.654
Pvit_08123 Pogona vitticeps Pvit_08123 I 0.654
hmg20b.S Xenopus laevis XB-GENE-17338323 I 0.654
hmg20b Xenopus tropicalis XB-GENE-5809048 I 0.654
hmg20b.L Xenopus laevis XB-GENE-5809135 I 0.654
ENSAMEG00000005678 Ailuropoda melanoleuca ENSAMEG00000005678 I 0.649
ENSBTAG00000047668 Bos taurus ENSBTAG00000047668 I 0.649
HMG20B Canis familiaris ENSCAFG00000019215 I 0.649
HMG20B Cavia porcellus ENSCPOG00000010777 I 0.649
ENSCSAG00000011140 Chlorocebus sabaeus ENSCSAG00000011140 I 0.649
HMG20B Felis catus ENSFCAG00000026167 I 0.649
HMG20B Homo sapiens ENSG00000064961 I 0.649
HMG20B Gorilla gorilla ENSGGOG00000014805 I 0.649
HMG20B Loxodonta africana ENSLAFG00000007845 I 0.649
ENSMEUG00000001270 Macropus eugenii ENSMEUG00000001270 I 0.649
HMG20B Myotis lucifugus ENSMLUG00000022392 I 0.649
HMG20B Monodelphis domestica ENSMODG00000006884 I 0.649
ENSMPUG00000003925 Mustela putorius furo ENSMPUG00000003925 I 0.649
Hmg20b Mus musculus ENSMUSG00000020232 D 0.649
HMG20B Ornithorhynchus anatinus ENSOANG00000013515 I 0.649
ENSOARG00000012318 Ovis aries ENSOARG00000012318 I 0.649
HMG20B Otolemur garnettii ENSOGAG00000014171 I 0.649
ENSPANG00000010575 Papio anubis ENSPANG00000010575 I 0.649
HMG20B Procavia capensis ENSPCAG00000010772 I 0.649
ENSPPYG00000009378 Pongo abelii ENSPPYG00000009378 I 0.649
Hmg20b Rattus norvegicus ENSRNOG00000020601 I 0.649
ENSSHAG00000007226 Sarcophilus harrisii ENSSHAG00000007226 I 0.649
ENSSTOG00000022314 Ictidomys tridecemlineatus ENSSTOG00000022314 I 0.649
HMG20B Tursiops truncatus ENSTTRG00000008832 I 0.649
Myotis_brandtii_HMG20B_10016321 Myotis brandtii Myotis_brandtii_HMG20B_10016321 I 0.649
ENSDORG00000012598 Dipodomys ordii ENSDORG00000012598 I 0.642
ENSLOCG00000014255 Lepisosteus oculatus ENSLOCG00000014255 I 0.630
estExt_fgenesh2_pg.C_2300011 Branchiostoma floridae estExt_fgenesh2_pg.C_2300011 I 0.626
estExt_fgenesh2_pg.C_2300014 Branchiostoma floridae estExt_fgenesh2_pg.C_2300014 I 0.626
hmg20a Danio rerio ENSDARG00000031198 I 0.623
ENSLACG00000004599 Latimeria chalumnae ENSLACG00000004599 I 0.622
hmg20a Xenopus tropicalis XB-GENE-955353 I 0.616
hmg20a.L Xenopus laevis XB-GENE-955359 I 0.616
ENSOARG00000005838 Ovis aries ENSOARG00000005838 I 0.610
ENSAMXG00000013048 Astyanax mexicanus ENSAMXG00000013048 I 0.601
hmg20a Gasterosteus aculeatus ENSGACG00000003466 I 0.601
ENSGMOG00000015452 Gadus morhua ENSGMOG00000015452 I 0.601
ENSONIG00000012862 Oreochromis niloticus ENSONIG00000012862 I 0.601
hmg20a Oryzias latipes ENSORLG00000001794 I 0.601
ENSPFOG00000014087 Poecilia formosa ENSPFOG00000014087 I 0.601
hmg20a Tetraodon nigroviridis ENSTNIG00000008460 I 0.601
hmg20a Takifugu rubripes ENSTRUG00000016127 I 0.601
ENSXMAG00000000587 Xiphophorus maculatus ENSXMAG00000000587 I 0.601
ENSLACG00000010699 Latimeria chalumnae ENSLACG00000010699 I 0.598
NEMVEDRAFT_v1g105457 Nematostella vectensis NEMVEDRAFT_v1g105457 I 0.587
ENSLOCG00000010117 Lepisosteus oculatus ENSLOCG00000010117 I 0.567
SPU_004776 Strongylocentrotus purpuratus SPU_004776 I 0.564
SPU_018371 Strongylocentrotus purpuratus SPU_018371 I 0.564
HMG20A Anolis carolinensis ENSACAG00000011520 I 0.561
ENSAPLG00000015603 Anas platyrhynchos ENSAPLG00000015603 I 0.561
ENSFALG00000010751 Ficedula albicollis ENSFALG00000010751 I 0.561
ENSGALG00000002746 Gallus gallus ENSGALG00000002746 I 0.561
HMG20A Meleagris gallopavo ENSMGAG00000003179 I 0.561
ENSPSIG00000013006 Pelodiscus sinensis ENSPSIG00000013006 I 0.561
HMG20A Taeniopygia guttata ENSTGUG00000003690 I 0.561
NEMVEDRAFT_v1g87244 Nematostella vectensis NEMVEDRAFT_v1g87244 I 0.561
Aan_R011791 Calypte anna Aan_R011791 I 0.561
Afo_R007008 Aptenodytes forsteri Afo_R007008 I 0.561
Alligator_sinensis_CCG010545.1 Alligator sinensis Alligator_sinensis_CCG010545.1 I 0.561
Brh_R011859 Buceros rhinoceros Brh_R011859 I 0.561
Cmyd_10010094 Chelonia mydas Cmyd_10010094 I 0.561
Pvit_01997 Pogona vitticeps Pvit_01997 I 0.561
Tal_R006697 Tyto alba Tal_R006697 I 0.561
ENSAMEG00000010946 Ailuropoda melanoleuca ENSAMEG00000010946 I 0.556
ENSAMEG00000008348 Ailuropoda melanoleuca ENSAMEG00000008348 I 0.553
HMG20A Bos taurus ENSBTAG00000020441 I 0.553
HMG20A Canis familiaris ENSCAFG00000018061 I 0.553
HMG20A Choloepus hoffmanni ENSCHOG00000012116 I 0.553
HMG20A Callithrix jacchus ENSCJAG00000011131 I 0.553
HMG20A Cavia porcellus ENSCPOG00000011704 I 0.553
ENSCSAG00000014734 Chlorocebus sabaeus ENSCSAG00000014734 I 0.553
HMG20A Dasypus novemcinctus ENSDNOG00000034143 I 0.553
Hmg20a Dipodomys ordii ENSDORG00000000623 I 0.553
HMG20A Erinaceus europaeus ENSEEUG00000004472 I 0.553
HMG20A Echinops telfairi ENSETEG00000015812 I 0.553
HMG20A Felis catus ENSFCAG00000022539 I 0.553
HMG20A Homo sapiens ENSG00000140382 I 0.553
HMG20A Gorilla gorilla ENSGGOG00000008439 I 0.553
HMG20A Loxodonta africana ENSLAFG00000018273 I 0.553
ENSMEUG00000016429 Macropus eugenii ENSMEUG00000016429 I 0.553
HMG20A Microcebus murinus ENSMICG00000011025 I 0.553
HMG20A Myotis lucifugus ENSMLUG00000011648 I 0.553
HMG20A Macaca mulatta ENSMMUG00000007430 I 0.553
HMG20A Monodelphis domestica ENSMODG00000012113 I 0.553
ENSMPUG00000017330 Mustela putorius furo ENSMPUG00000017330 I 0.553
Hmg20a Mus musculus ENSMUSG00000032329 I 0.553
ENSNLEG00000008357 Nomascus leucogenys ENSNLEG00000008357 I 0.553
HMG20A Ornithorhynchus anatinus ENSOANG00000009993 I 0.553
ENSOARG00000001765 Ovis aries ENSOARG00000001765 I 0.553
HMG20A Oryctolagus cuniculus ENSOCUG00000005648 I 0.553
HMG20A Otolemur garnettii ENSOGAG00000006630 I 0.553
ENSPANG00000015844 Papio anubis ENSPANG00000015844 I 0.553
HMG20A Procavia capensis ENSPCAG00000013879 I 0.553
ENSPPYG00000006683 Pongo abelii ENSPPYG00000006683 I 0.553
HMG20A Pan troglodytes ENSPTRG00000007326 I 0.553
Hmg20a Rattus norvegicus ENSRNOG00000016905 I 0.553
ENSSHAG00000012311 Sarcophilus harrisii ENSSHAG00000012311 I 0.553
HMG20A Sus scrofa ENSSSCG00000001871 I 0.553
ENSSSCG00000024002 Sus scrofa ENSSSCG00000024002 I 0.553
ENSSTOG00000013818 Ictidomys tridecemlineatus ENSSTOG00000013818 I 0.553
HMG20A Tupaia belangeri ENSTBEG00000015283 I 0.553
ENSTSYG00000003485 Tarsius syrichta ENSTSYG00000003485 I 0.553
HMG20A Tursiops truncatus ENSTTRG00000006500 I 0.553
HMG20A Vicugna pacos ENSVPAG00000010013 I 0.553
ENSP00000336856-D1 Bos grunniens ENSP00000336856-D1 I 0.553
ENSP00000371133 Macaca fascicularis ENSP00000371133 I 0.553
Myotis_brandtii_HMG20A_10005450 Myotis brandtii Myotis_brandtii_HMG20A_10005450 I 0.553
SMAR000790 Strigamia maritima SMAR000790 I 0.550
TriadG23407 Trichoplax adhaerens TriadG23407 I 0.550
XP_002158984.1 Hydra magnipapillata XP_002158984.1 I 0.541
XP_002161760.1 Hydra magnipapillata XP_002161760.1 I 0.541
Sakowv30033800m.g Saccoglossus kowalevskii Sakowv30033800m.g I 0.540
ENSCPOG00000020879 Cavia porcellus ENSCPOG00000020879 I 0.530
Gfo_R004366 Geospiza fortis Gfo_R004366 I 0.530
HMG20A Sorex araneus ENSSARG00000012609 I 0.512
Ocbimv22031259m.g Octopus bimaculoides Ocbimv22031259m.g I 0.504
estExt_fgenesh2_pg.C_1350020 Branchiostoma floridae estExt_fgenesh2_pg.C_1350020 I 0.501
estExt_fgenesh2_pg.C_4800003 Branchiostoma floridae estExt_fgenesh2_pg.C_4800003 I 0.501
ENSMMUG00000028932 Macaca mulatta ENSMMUG00000028932 I 0.485
ENSMMUP00000031974 Macaca fascicularis ENSMMUP00000031974 I 0.485
L798_15457 Zootermopsis nevadensis L798_15457 I 0.481
HMG20B Pteropus vampyrus ENSPVAG00000004300 I 0.469
Sakowv30005216m.g Saccoglossus kowalevskii Sakowv30005216m.g I 0.467
LotgiG196090 Lottia gigantea LotgiG196090 I 0.465
YQE_10385 Dendroctonus ponderosae YQE_10385 I 0.463
NV11068 Nasonia vitripennis NV11068 I 0.459
SMAR002604 Strigamia maritima SMAR002604 I 0.458
CapteG155070 Capitella teleta CapteG155070 I 0.453
HHAL010521-PA Halyomorpha halys HHAL010521-PA I 0.453
Cmyd_10009674 Chelonia mydas Cmyd_10009674 I 0.450
CLEC002862 Cimex lectularius CLEC002862 I 0.450
LDEC010438 Leptinotarsa decemlineata LDEC010438 I 0.446
CGI_10028818 Crassostrea gigas CGI_10028818 I 0.440
CapteG191691 Capitella teleta CapteG191691 I 0.436
MCINX003064 Melitaea cinxia MCINX003064 I 0.434
ENSMPUG00000007386 Mustela putorius furo ENSMPUG00000007386 I 0.430
LotgiG231408 Lottia gigantea LotgiG231408 I 0.429
GB41600 Apis mellifera GB41600 I 0.427
Hsal_13222--XP_625193.1_APIME Harpegnathos saltator Hsal_13222--XP_625193.1_APIME I 0.427
HMG20A Ochotona princeps ENSOPRG00000011000 I 0.423
RPRC008043 Rhodnius prolixus RPRC008043 I 0.422
ACYPI002322 Acyrthosiphon pisum ACYPI002322 I 0.420
BGIBMGA005325 Bombyx mori BGIBMGA005325 I 0.420
TC011144 Tribolium castaneum TC011144 N 0.417
HMEL017569 Heliconius melpomene HMEL017569 I 0.416