HCOI01912600 (Haemonchus contortus)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 HCOI01912600 T336405_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HMG-1
M02720_2.00 		Pisum sativum
STYGTDHTY
RADHACRAS		 SELEX
Mathelier et al.(2014)
MA0044.1 		0.422 0.362
For this family, TFs with SR scores > 0.415 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
HCOI01912600.t1 Sox 23 91

Links

Other Sox family TFs
Other Haemonchus contortus TFs

258 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29600.m000548 Ricinus communis 29600.m000548 I 0.431
29669.m000844 Ricinus communis 29669.m000844 I 0.461
30170.m014386 Ricinus communis 30170.m014386 I 0.423
AABR07009373.1 Rattus norvegicus ENSRNOG00000011429 I 0.416
ACAC_0000817201 Angiostrongylus cantonensis ACAC_0000817201 N 0.514
ACEP16621 Atta cephalotes ACEP16621 N 0.436
ACOC_0000235301 Angiostrongylus costaricensis ACOC_0000235301 N 0.514
ALUE_0000365901 Ascaris lumbricoides ALUE_0000365901 N 0.473
AMAG_00757 Allomyces macrogynus AMAG_00757 N 0.433
AMAG_02260 Allomyces macrogynus AMAG_02260 N 0.433
AMTR_s00029p00240750 Amborella trichopoda AMTR_s00029p00240750 I 0.432
AMTR_s00044p00160130 Amborella trichopoda AMTR_s00044p00160130 I 0.423
ANCCEY_04224 Ancylostoma ceylanicum ANCCEY_04224 N 0.514
ANCDUO_12352 Ancylostoma duodenale ANCDUO_12352 N 0.514
Aquca_004_00335 Aquilegia coerulea Aquca_004_00335 I 0.461
Aquca_015_00344 Aquilegia coerulea Aquca_015_00344 I 0.452
Aquca_045_00054 Aquilegia coerulea Aquca_045_00054 I 0.432
ASIM_0001178701 Anisakis simplex ASIM_0001178701 N 0.473
ASU_05994 Ascaris suum ASU_05994 N 0.473
ASU_09087 Ascaris suum ASU_09087 N 0.473
BGIOSGA008782 Oryza indica BGIOSGA008782 N 0.415
BGIOSGA027814 Oryza indica BGIOSGA027814 I 0.483
BGIOSGA027819 Oryza indica BGIOSGA027819 I 0.483
Bm8632 Brugia malayi Bm8632 N 0.443
Bo5g030580 Brassica oleracea Bo5g030580 I 0.461
Bo7g061420 Brassica oleracea Bo7g061420 I 0.461
Bo7g101270 Brassica oleracea Bo7g101270 I 0.435
Bo8g070350 Brassica oleracea Bo8g070350 I 0.461
Bo8g081200 Brassica oleracea Bo8g081200 I 0.423
Bostr.0556s0524 Boechera stricta Bostr.0556s0524 I 0.419
Bostr.18351s0219 Boechera stricta Bostr.18351s0219 I 0.422
Bostr.6864s0060 Boechera stricta Bostr.6864s0060 I 0.435
Bostr.7128s0662 Boechera stricta Bostr.7128s0662 I 0.461
Bostr.7128s0663 Boechera stricta Bostr.7128s0663 I 0.419
Bra002073 Brassica rapa Bra002073 I 0.429
Bra025350 Brassica rapa Bra025350 N 0.419
Bra025838 Brassica rapa Bra025838 I 0.461
Bra037266 Brassica rapa Bra037266 I 0.429
BRADI3G51140 Brachypodium distachyon BRADI3G51140 N 0.415
BRADI4G37247 Brachypodium distachyon BRADI4G37247 I 0.432
BTMF_0001080901 Brugia timori BTMF_0001080901 N 0.617
BXY_1081800 Bursaphelenchus xylophilus BXY_1081800 I 0.446
BXY_1081900 Bursaphelenchus xylophilus BXY_1081900 I 0.453
Cagra.0535s0005 Capsella grandiflora Cagra.0535s0005 I 0.438
Cagra.1043s0022 Capsella grandiflora Cagra.1043s0022 I 0.435
Cagra.1891s0017 Capsella grandiflora Cagra.1891s0017 I 0.422
Cagra.6160s0027 Capsella grandiflora Cagra.6160s0027 I 0.461
Cagra.6160s0028 Capsella grandiflora Cagra.6160s0028 I 0.419
Carubv10010586m.g Capsella rubella Carubv10010586m.g I 0.419
Carubv10012681m.g Capsella rubella Carubv10012681m.g I 0.461
Carubv10014808m.g Capsella rubella Carubv10014808m.g I 0.422
Carubv10016819m.g Capsella rubella Carubv10016819m.g I 0.438
Carubv10018109m.g Capsella rubella Carubv10018109m.g I 0.423
cassava18624.valid.m1 Manihot esculenta cassava18624.valid.m1 I 0.423
cassava18625.valid.m1 Manihot esculenta cassava18625.valid.m1 I 0.423
cassava18626.valid.m1 Manihot esculenta cassava18626.valid.m1 I 0.423
cassava23716.valid.m1 Manihot esculenta cassava23716.valid.m1 I 0.508
cassava24859.valid.m1 Manihot esculenta cassava24859.valid.m1 I 0.432
cassava35948.valid.m1 Manihot esculenta cassava35948.valid.m1 I 0.423
Ca_09896 Cicer arietinum Ca_09896 I 0.446
CBN25379 Caenorhabditis brenneri CBN25379 I 0.420
Cflo_05893--XP_624266.1_APIME Camponotus floridanus Cflo_05893--XP_624266.1_APIME N 0.470
chr1.CM0113.560.nc Lotus japonicus chr1.CM0113.560.nc I 0.429
Ciclev10002782m.g Citrus clementina Ciclev10002782m.g I 0.432
Ciclev10016587m.g Citrus clementina Ciclev10016587m.g N 0.459
Ciclev10026715m.g Citrus clementina Ciclev10026715m.g I 0.432
Ciclev10032930m.g Citrus clementina Ciclev10032930m.g I 0.426
CJA04355 Caenorhabditis japonica CJA04355 N 0.476
Cla009093 Citrullus lanatus Cla009093 I 0.432
Cla009222 Citrullus lanatus Cla009222 I 0.417
Cla018386 Citrullus lanatus Cla018386 I 0.418
CRE11852 Caenorhabditis remanei CRE11852 N 0.476
Cucsa.067200 Cucumis sativus Cucsa.067200 I 0.428
Cucsa.300030 Cucumis sativus Cucsa.300030 I 0.417
Cucsa.323100 Cucumis sativus Cucsa.323100 I 0.432
D915_02473 Fasciola hepatica D915_02473 N 0.528
DICVIV_05502 Dictyocaulus viviparus DICVIV_05502 N 0.514
DME_0000779601 Dracunculus medinensis DME_0000779601 N 0.476
ECPE_0000536801 Echinostoma caproni ECPE_0000536801 N 0.518
ENSMMUG00000031258 Macaca mulatta ENSMMUG00000031258 I 0.417
ENSOGAG00000026034 Otolemur garnettii ENSOGAG00000026034 I 0.465
ENSOGAG00000031524 Otolemur garnettii ENSOGAG00000031524 I 0.420
estExt_fgenesh1_pg.C_2230007 Physcomitrella patens estExt_fgenesh1_pg.C_2230007 I 0.430
ETH_00027140 Eimeria tenella ETH_00027140 I 0.433
ETH_00031100 Eimeria tenella ETH_00031100 I 0.472
Eucgr.F03571 Eucalyptus grandis Eucgr.F03571 I 0.432
Eucgr.J02535 Eucalyptus grandis Eucgr.J02535 I 0.461
evm.TU.supercontig_211.6 Carica papaya evm.TU.supercontig_211.6 I 0.428
evm.TU.supercontig_26.174 Carica papaya evm.TU.supercontig_26.174 I 0.432
fgenesh1_pg.scaffold_277000017 Physcomitrella patens fgenesh1_pg.scaffold_277000017 I 0.427
GB47837 Apis mellifera GB47837 N 0.470
GD25013 Drosophila simulans FBgn0196325 N 0.477
GE11532 Drosophila yakuba FBgn0229332 N 0.477
gene13043-v1.0-hybrid Fragaria vesca gene13043-v1.0-hybrid I 0.432
GF12460 Drosophila ananassae FBgn0089497 N 0.485
GG19998 Drosophila erecta FBgn0112197 N 0.477
GH21151 Drosophila grimshawi FBgn0128613 N 0.471
GI18750 Drosophila mojavensis FBgn0141489 N 0.440
GJ21774 Drosophila virilis FBgn0208892 N 0.477
GK22092 Drosophila willistoni FBgn0224077 N 0.421
GL11071 Drosophila persimilis FBgn0148681 N 0.519
GLYMA04G01840 Glycine max GLYMA04G01840 I 0.460
GLYMA06G01970 Glycine max GLYMA06G01970 I 0.460
Gorai.002G115100 Gossypium raimondii Gorai.002G115100 I 0.432
Gorai.005G114500 Gossypium raimondii Gorai.005G114500 I 0.432
Gorai.008G147700 Gossypium raimondii Gorai.008G147700 I 0.467
Gorai.009G186800 Gossypium raimondii Gorai.009G186800 I 0.432
GSMUA_Achr2G11060_001 Musa acuminata GSMUA_Achr2G11060_001 I 0.448
GSMUA_Achr4G25860_001 Musa acuminata GSMUA_Achr4G25860_001 I 0.432
GSMUA_Achr5G11630_001 Musa acuminata GSMUA_Achr5G11630_001 I 0.417
gw1.6.1665.1 Ostreococcus RCC809 gw1.6.1665.1 I 0.479
HCOI01550200 Haemonchus contortus HCOI01550200 N 0.514
HCOI01913300 Haemonchus contortus HCOI01913300 I 0.741
HMG-1 Pisum sativum Q41026_PEA D 0.422
hmg-1.1 Caenorhabditis elegans WBGene00001971 N 0.473
HMGB1 Arabidopsis thaliana AT3G51880 I 0.435
HMGB1 Arabidopsis lyrata fgenesh1_pm.C_scaffold_5001281 I 0.435
HMGB2 Arabidopsis thaliana AT1G20693 I 0.419
HMGB2 Arabidopsis lyrata fgenesh2_kg.1__2255__AT1G20693.2 I 0.419
HMGB3 Arabidopsis thaliana AT1G20696 I 0.461
HMGB3 Arabidopsis lyrata fgenesh2_kg.1__2258__AT1G20696.3 I 0.461
HMGB4 Arabidopsis lyrata fgenesh2_kg.3__3350__AT2G17560.1 I 0.422
HMGB6 Vitis vinifera VIT_10s0071g00870 I 0.457
HPLM_0001324601 Haemonchus placei HPLM_0001324601 N 0.514
Hsal_13112--XP_624266.1_APIME Harpegnathos saltator Hsal_13112--XP_624266.1_APIME N 0.470
L596_g16476 Steinernema carpocapsae L596_g16476 N 0.453
L596_g28088 Steinernema carpocapsae L596_g28088 N 0.476
L889_g16198 Steinernema feltiae L889_g16198 N 0.456
L889_g9094 Steinernema feltiae L889_g9094 N 0.473
L892_g19058 Steinernema scapterisci L892_g19058 N 0.476
L892_g23618 Steinernema scapterisci L892_g23618 N 0.456
L893_g23503 Steinernema glaseri L893_g23503 N 0.464
L893_g29974 Steinernema glaseri L893_g29974 N 0.476
L898_g4830 Steinernema monticolum L898_g4830 N 0.476
L898_g7743 Steinernema monticolum L898_g7743 N 0.464
LDEC020995 Leptinotarsa decemlineata LDEC020995 N 0.457
LOAG_08062 Loa loa LOAG_08062 N 0.443
LPERR08G00140 Leersia perrieri LPERR08G00140 N 0.465
Lus10012252.g Linum usitatissimum Lus10012252.g I 0.454
Lus10016025.g Linum usitatissimum Lus10016025.g I 0.454
MDOA007633 Musca domestica MDOA007633 N 0.450
MDP0000205665 Malus domestica MDP0000205665 I 0.417
MDP0000275042 Malus domestica MDP0000275042 I 0.423
MDP0000310093 Malus domestica MDP0000310093 I 0.431
MDP0000362980 Malus domestica MDP0000362980 I 0.432
MDP0000607529 Malus domestica MDP0000607529 I 0.461
MDP0000757111 Malus domestica MDP0000757111 I 0.432
mgf000913m Mimulus guttatus mgf000913m I 0.442
mgf006113m Mimulus guttatus mgf006113m I 0.449
mgf008076m Mimulus guttatus mgf008076m I 0.449
mgf009330m Mimulus guttatus mgf009330m I 0.445
mgf014518m Mimulus guttatus mgf014518m I 0.461
mgf016608m Mimulus guttatus mgf016608m I 0.449
mgf024995m Mimulus guttatus mgf024995m I 0.430
MTR_3g115580 Medicago truncatula MTR_3g115580 I 0.429
MTR_5g024180 Medicago truncatula MTR_5g024180 I 0.428
MTR_5g082570 Medicago truncatula MTR_5g082570 I 0.434
MTR_7g068280 Medicago truncatula MTR_7g068280 I 0.422
MTR_8g073345 Medicago truncatula MTR_8g073345 I 0.446
nAv.1.0.1.g08227 Acanthocheilonema viteae nAv.1.0.1.g08227 N 0.443
NBR_0001277401 Nippostrongylus brasiliensis NBR_0001277401 N 0.514
NCLIV_043670 Neospora caninum NCLIV_043670 I 0.468
nDi.2.2.2.g08508 Dirofilaria immitis nDi.2.2.2.g08508 N 0.443
NECAME_17555 Necator americanus NECAME_17555 N 0.514
NECAME_17981 Necator americanus NECAME_17981 N 0.514
nLs.2.1.2.g04082 Litomosoides sigmodontis nLs.2.1.2.g04082 N 0.443
nOo.2.0.1.g04208 Onchocerca ochengi nOo.2.0.1.g04208 N 0.617
nOo.2.0.1.g04693 Onchocerca ochengi nOo.2.0.1.g04693 N 0.443
OB02G34710 Oryza brachyantha OB02G34710 N 0.415
OB08G10120 Oryza brachyantha OB08G10120 N 0.437
OBART02G27340 Oryza barthii OBART02G27340 N 0.415
OBART08G00070 Oryza barthii OBART08G00070 I 0.483
OESDEN_09619 Oesophagostomum dentatum OESDEN_09619 N 0.514
OESDEN_24828 Oesophagostomum dentatum OESDEN_24828 N 0.638
OFLC_0000261801 Onchocerca flexuosa OFLC_0000261801 N 0.617
OGLUM02G27900 Oryza glumaepatula OGLUM02G27900 N 0.415
OGLUM08G00090 Oryza glumaepatula OGLUM08G00090 I 0.483
OLONG_014445 Oryza longistaminata OLONG_014445 I 0.483
OMERI02G26620 Oryza meridionalis OMERI02G26620 N 0.415
ONIVA02G29880 Oryza nivara ONIVA02G29880 N 0.415
ONIVA08G00070 Oryza nivara ONIVA08G00070 I 0.483
OPUNC02G25020 Oryza punctata OPUNC02G25020 N 0.415
OPUNC08G00150 Oryza punctata OPUNC08G00150 I 0.483
orange1.1g026850m.g Citrus sinensis orange1.1g026850m.g N 0.459
orange1.1g029982m.g Citrus sinensis orange1.1g029982m.g I 0.426
orange1.1g031906m.g Citrus sinensis orange1.1g031906m.g I 0.432
orange1.1g031973m.g Citrus sinensis orange1.1g031973m.g I 0.420
ORUFI02G28820 Oryza rufipogon ORUFI02G28820 N 0.415
ORUFI08G00080 Oryza rufipogon ORUFI08G00080 I 0.483
OS02G0670400 Oryza sativa OS02G0670400 N 0.415
OS08G0101100 Oryza sativa OS08G0101100 I 0.483
OSTLU_18991 Ostreococcus lucimarinus OSTLU_18991 N 0.437
OSTLU_31946 Ostreococcus lucimarinus OSTLU_31946 I 0.494
PDK_20s1306741g001 Phoenix dactylifera PDK_20s1306741g001 I 0.432
PGSC0003DMG400001567 Solanum tuberosum PGSC0003DMG400001567 I 0.432
PGSC0003DMG400018685 Solanum tuberosum PGSC0003DMG400018685 I 0.454
PGSC0003DMG400025304 Solanum tuberosum PGSC0003DMG400025304 I 0.417
Pm006054 Prunus mume Pm006054 I 0.417
Pm018913 Prunus mume Pm018913 I 0.432
Pm026798 Prunus mume Pm026798 I 0.452
POPTR_0002s01000 Populus trichocarpa POPTR_0002s01000 I 0.432
POPTR_0005s10440 Populus trichocarpa POPTR_0005s10440 I 0.461
POPTR_0008s06730 Populus trichocarpa POPTR_0008s06730 I 0.426
POPTR_0010s19720 Populus trichocarpa POPTR_0010s19720 I 0.432
Ppa-hmg-1.1 Pristionchus pacificus PPA22767 N 0.461
PPAI002521 Phlebotomus papatasi PPAI002521 N 0.438
PRUPE_ppa011596mg Prunus persica PRUPE_ppa011596mg I 0.461
PRUPE_ppa012424mg Prunus persica PRUPE_ppa012424mg I 0.432
PRUPE_ppa012972mg Prunus persica PRUPE_ppa012972mg I 0.461
PRUPE_ppa026912mg Prunus persica PRUPE_ppa026912mg I 0.417
PTRK_0001161700 Parastrongyloides trichosuri PTRK_0001161700 N 0.422
PTRK_0001490800 Parastrongyloides trichosuri PTRK_0001490800 N 0.502
RSKR_0000587700 Rhabditophanes kr3021 RSKR_0000587700 N 0.467
SapurV1A.0016s0600 Salix purpurea SapurV1A.0016s0600 I 0.461
SapurV1A.0085s0030 Salix purpurea SapurV1A.0085s0030 I 0.461
SapurV1A.0266s0310 Salix purpurea SapurV1A.0266s0310 I 0.432
SapurV1A.0766s0120 Salix purpurea SapurV1A.0766s0120 I 0.417
SapurV1A.0825s0160 Salix purpurea SapurV1A.0825s0160 I 0.426
scaffold113-EXSNAP2012.49 Pristionchus exspectatus scaffold113-EXSNAP2012.49 N 0.461
scaffold1425-EXSNAP2012.3 Pristionchus exspectatus scaffold1425-EXSNAP2012.3 N 0.461
SELMODRAFT_18312 Selaginella moellendorffii SELMODRAFT_18312 I 0.431
SELMODRAFT_18313 Selaginella moellendorffii SELMODRAFT_18313 I 0.431
SINV22588 Solenopsis invicta SINV22588 N 0.470
SNAPOd2T00000181001 Oikopleura dioica SNAPOd2T00000181001 N 0.421
SNAPOd2T00016002001 Oikopleura dioica SNAPOd2T00016002001 N 0.424
Solyc02g082700.2 Solanum lycopersicum Solyc02g082700.2 I 0.432
Solyc04g008820.2 Solanum lycopersicum Solyc04g008820.2 I 0.457
SPAL_0000986100 Strongyloides papillosus SPAL_0000986100 N 0.473
SPAL_0001085700 Strongyloides papillosus SPAL_0001085700 N 0.422
Ssrp Drosophila melanogaster FBgn0010278 N 0.477
Ssrp Drosophila pseudoobscura FBgn0078456 N 0.519
SSRP1 Arabidopsis thaliana AT3G28730 I 0.438
SSTP_0000585600 Strongyloides stercoralis SSTP_0000585600 N 0.422
SSTP_0001024100 Strongyloides stercoralis SSTP_0001024100 N 0.473
SVE_0294800 Strongyloides venezuelensis SVE_0294800 N 0.473
SVE_0954900 Strongyloides venezuelensis SVE_0954900 N 0.422
TCM_000068 Theobroma cacao TCM_000068 I 0.426
TCM_007659 Theobroma cacao TCM_007659 I 0.424
TCM_034406 Theobroma cacao TCM_034406 I 0.432
TCNE_0000332201 Toxocara canis TCNE_0000332201 N 0.473
TCNE_0001025901 Toxocara canis TCNE_0001025901 N 0.473
TELCIR_02603 Teladorsagia circumcincta TELCIR_02603 N 0.514
tetur02g08250 Tetranychus urticae tetur02g08250 N 0.473
TGME49_010410 Toxoplasma gondii TGME49_010410 I 0.468
Thhalv10003803m.g Eutrema salsugineum Thhalv10003803m.g I 0.438
Thhalv10009371m.g Eutrema salsugineum Thhalv10009371m.g I 0.432
Thhalv10009970m.g Eutrema salsugineum Thhalv10009970m.g I 0.461
Thhalv10010751m.g Eutrema salsugineum Thhalv10010751m.g I 0.435
Thhalv10022905m.g Eutrema salsugineum Thhalv10022905m.g I 0.429
Traes_5BL_9CC98DD38 Triticum aestivum Traes_5BL_9CC98DD38 I 0.423
Traes_5DL_DD9491112 Triticum aestivum Traes_5DL_DD9491112 I 0.423
TSTA_074230 Talaromyces stipitatus TSTA_074230 N 0.423
VIT_04s0044g00110 Vitis vinifera VIT_04s0044g00110 I 0.432
VIT_13s0067g00640 Vitis vinifera VIT_13s0067g00640 I 0.432
VIT_18s0122g01190 Vitis vinifera VIT_18s0122g01190 I 0.432
WBGene00238628 Onchocerca volvulus WBGene00238628 N 0.443
WUBG_16399 Wuchereria bancrofti WUBG_16399 N 0.617
XM_002306945.1 Populus trichocarpa POPTR_0005s27390 I 0.432