Si002067m.g (Setaria italica)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 Si002067m.g T005230_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q8H769_WHEAT
M09721_2.00 		Triticum aestivum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB1_01 		0.746 0.878
PK07402.1
M01097_2.00 		Cannabis sativa
NVRCCGMCH
DGKCGGYBN		 PBM
Lambert et al.(2019)
pTH11436 		0.735 0.878
DREB2G
M06662_2.00 		Arabidopsis thaliana
DCCRCCGCYDYHDYH
DRHDRHRGCGGYGGH		 Dap-seq
OMalley et al.(2016)
At5g18450_col_a 		0.692 0.816
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Si002067m AP2 167 218

Links

Other AP2 family TFs
Other Setaria italica TFs

100 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_05774 Aegilops tauschii F775_05774 I 0.746
Aquca_030_00214 Aquilegia coerulea Aquca_030_00214 I 0.690
DREB2C Arabidopsis lyrata scaffold_402826.1 I 0.680
scaffold_601912.1 Arabidopsis lyrata scaffold_601912.1 I 0.692
DREB2G Arabidopsis thaliana AT5G18450 D 0.692
Bostr.26527s0367 Boechera stricta Bostr.26527s0367 I 0.692
BRADI2G04000 Brachypodium distachyon BRADI2G04000 I 0.773
BRADI3G12680 Brachypodium distachyon BRADI3G12680 I 0.686
Bo4g190040 Brassica oleracea Bo4g190040 I 0.694
Bo9g155940 Brassica oleracea Bo9g155940 I 0.692
Bo9g177130 Brassica oleracea Bo9g177130 I 0.699
Bra002159 Brassica rapa Bra002159 I 0.692
Bra017011 Brassica rapa Bra017011 I 0.694
PK07402.1 Cannabis sativa PK07402.1 D 0.735
PK07829.1 Cannabis sativa PK07829.1 I 0.708
Cagra.0712s0008 Capsella grandiflora Cagra.0712s0008 I 0.694
Carubv10002425m.g Capsella rubella Carubv10002425m.g I 0.694
evm.TU.supercontig_19.121 Carica papaya evm.TU.supercontig_19.121 I 0.751
evm.TU.supercontig_51.23 Carica papaya evm.TU.supercontig_51.23 I 0.687
evm.TU.supercontig_92.16 Carica papaya evm.TU.supercontig_92.16 I 0.678
Cla006713 Citrullus lanatus Cla006713 I 0.720
Ciclev10032029m.g Citrus clementina Ciclev10032029m.g I 0.719
orange1.1g019546m.g Citrus sinensis orange1.1g019546m.g I 0.719
Cucsa.136780 Cucumis sativus Cucsa.136780 I 0.721
Eucgr.G03094 Eucalyptus grandis Eucgr.G03094 I 0.728
Eucgr.K02952 Eucalyptus grandis Eucgr.K02952 I 0.699
Thhalv10016913m.g Eutrema salsugineum Thhalv10016913m.g I 0.711
Thhalv10015907m.g Eutrema salsugineum Thhalv10015907m.g I 0.692
gene01985-v1.0-hybrid Fragaria vesca gene01985-v1.0-hybrid I 0.692
gene21047-v1.0-hybrid Fragaria vesca gene21047-v1.0-hybrid I 0.709
Gorai.011G235900 Gossypium raimondii Gorai.011G235900 I 0.699
MLOC_66686 Hordeum vulgare MLOC_66686 I 0.746
LPERR01G03760 Leersia perrieri LPERR01G03760 I 0.767
Lus10012226.g Linum usitatissimum Lus10012226.g I 0.689
Lus10023633.g Linum usitatissimum Lus10023633.g I 0.706
Lus10034902.g Linum usitatissimum Lus10034902.g I 0.706
Lus10011319.g Linum usitatissimum Lus10011319.g I 0.678
Lus10012210.g Linum usitatissimum Lus10012210.g I 0.678
MDP0000880312 Malus domestica MDP0000880312 I 0.681
MDP0000147009 Malus domestica MDP0000147009 I 0.703
MDP0000153866 Malus domestica MDP0000153866 I 0.690
MDP0000165880 Malus domestica MDP0000165880 I 0.709
MDP0000290585 Malus domestica MDP0000290585 I 0.696
MDP0000446783 Malus domestica MDP0000446783 I 0.703
cassava19475.valid.m1 Manihot esculenta cassava19475.valid.m1 I 0.721
MTR_5g083340 Medicago truncatula MTR_5g083340 I 0.713
MTR_5g083330 Medicago truncatula MTR_5g083330 I 0.690
mgf017629m Mimulus guttatus mgf017629m I 0.685
GSMUA_Achr11G24820_001 Musa acuminata GSMUA_Achr11G24820_001 I 0.714
GSMUA_AchrUn_randomG14580_001 Musa acuminata GSMUA_AchrUn_randomG14580_001 I 0.738
GSMUA_AchrUn_randomG08690_001 Musa acuminata GSMUA_AchrUn_randomG08690_001 I 0.677
GSMUA_Achr9G04630_001 Musa acuminata GSMUA_Achr9G04630_001 I 0.726
GSMUA_Achr6G32780_001 Musa acuminata GSMUA_Achr6G32780_001 I 0.683
GSMUA_Achr5G28050_001 Musa acuminata GSMUA_Achr5G28050_001 I 0.693
OBART01G04210 Oryza barthii OBART01G04210 I 0.769
OB01G13930 Oryza brachyantha OB01G13930 I 0.769
ORGLA01G0037700 Oryza glaberrima ORGLA01G0037700 I 0.769
OGLUM01G04560 Oryza glumaepatula OGLUM01G04560 I 0.769
BGIOSGA002846 Oryza indica BGIOSGA002846 I 0.769
OLONG_014228 Oryza longistaminata OLONG_014228 I 0.769
OMERI01G04110 Oryza meridionalis OMERI01G04110 I 0.769
ONIVA01G04630 Oryza nivara ONIVA01G04630 I 0.769
OPUNC01G03970 Oryza punctata OPUNC01G03970 I 0.769
ORUFI01G04360 Oryza rufipogon ORUFI01G04360 I 0.769
DREB2A Oryza sativa OS01G0165000 I 0.769
Pavir.Ea00429 Panicum virgatum Pavir.Ea00429 I 0.769
Pavir.J37967 Panicum virgatum Pavir.J37967 I 0.777
PDK_20s1493381g003 Phoenix dactylifera PDK_20s1493381g003 I 0.748
POPTR_0010s19100 Populus trichocarpa POPTR_0010s19100 I 0.729
POPTR_0008s07360 Populus trichocarpa POPTR_0008s07360 I 0.710
Pm018989 Prunus mume Pm018989 I 0.712
Pm015262 Prunus mume Pm015262 I 0.695
PRUPE_ppa022733mg Prunus persica PRUPE_ppa022733mg I 0.695
PRUPE_ppa007606mg Prunus persica PRUPE_ppa007606mg I 0.712
29729.m002292 Ricinus communis 29729.m002292 I 0.731
SapurV1A.2268s0010 Salix purpurea SapurV1A.2268s0010 I 0.727
SapurV1A.1420s0050 Salix purpurea SapurV1A.1420s0050 I 0.714
SapurV1A.1286s0030 Salix purpurea SapurV1A.1286s0030 I 0.727
SapurV1A.0673s0120 Salix purpurea SapurV1A.0673s0120 I 0.714
SapurV1A.0133s0330 Salix purpurea SapurV1A.0133s0330 I 0.678
SELMODRAFT_38502 Selaginella moellendorffii SELMODRAFT_38502 I 0.688
SELMODRAFT_105485 Selaginella moellendorffii SELMODRAFT_105485 I 0.688
Solyc05g052410.1 Solanum lycopersicum Solyc05g052410.1 I 0.720
Solyc04g050750.1 Solanum lycopersicum Solyc04g050750.1 I 0.679
PGSC0003DMG400028700 Solanum tuberosum PGSC0003DMG400028700 I 0.679
PGSC0003DMG400027117 Solanum tuberosum PGSC0003DMG400027117 I 0.720
Sb07g023575 Sorghum bicolor Sb07g023575 I 0.679
Sb03g004980 Sorghum bicolor Sb03g004980 I 0.782
TCM_043275 Theobroma cacao TCM_043275 I 0.684
TCM_043302 Theobroma cacao TCM_043302 I 0.687
TCM_043306 Theobroma cacao TCM_043306 I 0.687
Q8H769_WHEAT Triticum aestivum Q8H769_WHEAT D 0.746
Traes_2BL_B397F2CE3 Triticum aestivum Traes_2BL_B397F2CE3 I 0.677
Traes_3AS_62742A0471 Triticum aestivum Traes_3AS_62742A0471 I 0.746
TRAES3BF064700080CFD_g Triticum aestivum TRAES3BF064700080CFD_g I 0.746
Traes_5BL_7F0FD1538 Triticum aestivum Traes_5BL_7F0FD1538 I 0.737
TRIUR3_17973 Triticum urartu TRIUR3_17973 I 0.746
VIT_13s0067g01960 Vitis vinifera VIT_13s0067g01960 I 0.731
GRMZM2G156737 Zea mays GRMZM2G156737 I 0.690
GRMZM2G028386 Zea mays GRMZM2G028386 I 0.680