Afo_R005157 (Aptenodytes forsteri)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Afo_R005157 T046572_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HEY1
M02793_2.00 		Homo sapiens
SVCACGTGYC
GRCACGTGBS		 SELEX
Jolma et al.(2013)
HEY1_1 		0.871 0.982
HEY1
M04152_2.00 		Homo sapiens
NRCACGTGVV
BBCACGTGYN		 SELEX
Yin et al.(2017)
HEY1_eDBD_HT-SELEX 		0.871 0.982
HEY1
M04154_2.00 		Homo sapiens
NRCRCGYGVV
BBCRCGYGYN		 SELEX
Yin et al.(2017)
HEY1_FL_HT-SELEX 		0.871 0.982
HEY1
M04153_2.00 		Homo sapiens
NRCRCGYGVV
BBCRCGYGYN		 SELEX
Yin et al.(2017)
HEY1_eDBD_Methyl-HT-SELEX 		0.871 0.982
HEY1
M04155_2.00 		Homo sapiens
NDCRCGYRSN
NSYRCGYGHN		 SELEX
Yin et al.(2017)
HEY1_FL_Methyl-HT-SELEX 		0.871 0.982
Hey2
M01722_2.00 		Mus musculus
RCACGTGNN
NNCACGTGY		 PBM
Weirauch et al.(2014)
pTH5102 		0.860 0.945
HEY2
M02790_2.00 		Homo sapiens
GRCACGTGNV
BNCACGTGYC		 SELEX
Jolma et al.(2013)
HEY2_1 		0.860 0.945
HEY2
M02791_2.00 		Homo sapiens
GVCACGTGYN
NRCACGTGBC		 SELEX
Jolma et al.(2013)
HEY2_2 		0.860 0.945
HEY2
M04131_2.00 		Homo sapiens
NVCRCGYGVN
NBCRCGYGBN		 SELEX
Yin et al.(2017)
HEY2_eDBD_HT-SELEX 		0.860 0.945
HEY2
M04133_2.00 		Homo sapiens
NVCACGTGVN
NBCACGTGBN		 SELEX
Yin et al.(2017)
HEY2_FL_HT-SELEX 		0.860 0.945
HEY2
M04132_2.00 		Homo sapiens
NVCRCGYRVN
NBYRCGYGBN		 SELEX
Yin et al.(2017)
HEY2_eDBD_Methyl-HT-SELEX 		0.860 0.945
HEY2
M04134_2.00 		Homo sapiens
NVCRCGYGSN
NSCRCGYGBN		 SELEX
Yin et al.(2017)
HEY2_FL_Methyl-HT-SELEX 		0.860 0.945
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Afo_R005157 bHLH 11 66

Links

Other bHLH family TFs
Other Aptenodytes forsteri TFs

184 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_20715 Aegilops tauschii F775_20715 I
F775_21760 Aegilops tauschii F775_21760 I
F775_25656 Aegilops tauschii F775_25656 I
AMTR_s00066p00120340 Amborella trichopoda AMTR_s00066p00120340 I
Aquca_007_00083 Aquilegia coerulea Aquca_007_00083 I
Aquca_061_00084 Aquilegia coerulea Aquca_061_00084 I
ASL1 Arabidopsis lyrata fgenesh2_kg.8__2729__AT5G66870.1 I
LOB Arabidopsis lyrata scaffold_802995.1 I
LOB Arabidopsis thaliana AT5G63090 D
LBD36 Arabidopsis thaliana AT5G66870 I
Bostr.0568s0111 Boechera stricta Bostr.0568s0111 I
Bostr.0568s0498 Boechera stricta Bostr.0568s0498 I
BRADI1G14677 Brachypodium distachyon BRADI1G14677 N
BRADI2G25270 Brachypodium distachyon BRADI2G25270 I
BRADI2G57380 Brachypodium distachyon BRADI2G57380 I
Bo2g167820 Brassica oleracea Bo2g167820 I
Bo3g104760 Brassica oleracea Bo3g104760 I
Bo7g064360 Brassica oleracea Bo7g064360 I
Bo7g085860 Brassica oleracea Bo7g085860 I
Bra012112 Brassica rapa Bra012112 I
Bra025294 Brassica rapa Bra025294 I
Bra038606 Brassica rapa Bra038606 I
PK18922.1 Cannabis sativa PK18922.1 I
PK29334.1 Cannabis sativa PK29334.1 I
Cagra.20099s0001 Capsella grandiflora Cagra.20099s0001 I
Cagra.5118s0045 Capsella grandiflora Cagra.5118s0045 I
Carubv10026811m.g Capsella rubella Carubv10026811m.g I
Carubv10028397m.g Capsella rubella Carubv10028397m.g I
evm.TU.supercontig_110.17 Carica papaya evm.TU.supercontig_110.17 I
evm.TU.supercontig_6.423 Carica papaya evm.TU.supercontig_6.423 I
Ca_02124 Cicer arietinum Ca_02124 I
Ca_02125 Cicer arietinum Ca_02125 I
Ca_08824 Cicer arietinum Ca_08824 I
Ca_11161 Cicer arietinum Ca_11161 I
Ca_18206 Cicer arietinum Ca_18206 N
Cla019510 Citrullus lanatus Cla019510 I
Cla020438 Citrullus lanatus Cla020438 I
Ciclev10017006m.g Citrus clementina Ciclev10017006m.g I
Ciclev10017910m.g Citrus clementina Ciclev10017910m.g I
Ciclev10027275m.g Citrus clementina Ciclev10027275m.g I
orange1.1g027472m.g Citrus sinensis orange1.1g027472m.g I
orange1.1g031572m.g Citrus sinensis orange1.1g031572m.g I
orange1.1g039589m.g Citrus sinensis orange1.1g039589m.g I
Cucsa.196600 Cucumis sativus Cucsa.196600 I
Cucsa.250570 Cucumis sativus Cucsa.250570 I
Eucgr.K02809 Eucalyptus grandis Eucgr.K02809 I
Thhalv10004535m.g Eutrema salsugineum Thhalv10004535m.g I
Thhalv10004979m.g Eutrema salsugineum Thhalv10004979m.g I
gene24088-v1.0-hybrid Fragaria vesca gene24088-v1.0-hybrid I
gene30401-v1.0-hybrid Fragaria vesca gene30401-v1.0-hybrid I
GLYMA01G39060 Glycine max GLYMA01G39060 I
GLYMA04G11991 Glycine max GLYMA04G11991 I
GLYMA05G02530 Glycine max GLYMA05G02530 I
GLYMA05G09950 Glycine max GLYMA05G09950 I
GLYMA06G11181 Glycine max GLYMA06G11181 I
GLYMA11G06210 Glycine max GLYMA11G06210 I
GLYMA17G09380 Glycine max GLYMA17G09380 I
Gorai.006G033100 Gossypium raimondii Gorai.006G033100 I
Gorai.007G210500 Gossypium raimondii Gorai.007G210500 I
Gorai.008G073400 Gossypium raimondii Gorai.008G073400 I
Gorai.011G104600 Gossypium raimondii Gorai.011G104600 I
MLOC_61156 Hordeum vulgare MLOC_61156 I
MLOC_72525 Hordeum vulgare MLOC_72525 I
LPERR01G34430 Leersia perrieri LPERR01G34430 I
LPERR03G21590 Leersia perrieri LPERR03G21590 I
Lus10005313.g Linum usitatissimum Lus10005313.g I
Lus10016769.g Linum usitatissimum Lus10016769.g I
Lus10022463.g Linum usitatissimum Lus10022463.g I
Lus10027676.g Linum usitatissimum Lus10027676.g I
Lus10039940.g Linum usitatissimum Lus10039940.g I
chr2.LjT16G06.10.nd Lotus japonicus chr2.LjT16G06.10.nd I
MDP0000130659 Malus domestica MDP0000130659 I
MDP0000197526 Malus domestica MDP0000197526 I
MDP0000254288 Malus domestica MDP0000254288 I
MDP0000310871 Malus domestica MDP0000310871 I
MDP0000562305 Malus domestica MDP0000562305 I
MDP0000777060 Malus domestica MDP0000777060 I
cassava16840.m1 Manihot esculenta cassava16840.m1 I
cassava16846.m1 Manihot esculenta cassava16846.m1 I
cassava19770.m1 Manihot esculenta cassava19770.m1 I
cassava32690.m1 Manihot esculenta cassava32690.m1 I
cassava32691.m1 Manihot esculenta cassava32691.m1 I
cassava33952.m1 Manihot esculenta cassava33952.m1 I
MTR_4g105170 Medicago truncatula MTR_4g105170 I
MTR_5g017950 Medicago truncatula MTR_5g017950 I
mgf003146m Mimulus guttatus mgf003146m I
mgf004296m Mimulus guttatus mgf004296m I
mgf024603m Mimulus guttatus mgf024603m I
GSMUA_Achr6G04670_001 Musa acuminata GSMUA_Achr6G04670_001 I
OBART01G39990 Oryza barthii OBART01G39990 I
OB01G48740 Oryza brachyantha OB01G48740 I
OB03G34080 Oryza brachyantha OB03G34080 I
OB05G24560 Oryza brachyantha OB05G24560 I
ORGLA01G0339000 Oryza glaberrima ORGLA01G0339000 I
ORGLA03G0240600 Oryza glaberrima ORGLA03G0240600 I
ORGLA05G0143500 Oryza glaberrima ORGLA05G0143500 I
OGLUM01G44190 Oryza glumaepatula OGLUM01G44190 I
OGLUM03G26820 Oryza glumaepatula OGLUM03G26820 I
OGLUM05G17630 Oryza glumaepatula OGLUM05G17630 I
LBD6 Oryza indica BGIOSGA004955 I
BGIOSGA013119 Oryza indica BGIOSGA013119 I
BGIOSGA018046 Oryza indica BGIOSGA018046 I
OLONG_016086 Oryza longistaminata OLONG_016086 I
OMERI01G36900 Oryza meridionalis OMERI01G36900 I
ONIVA01G44840 Oryza nivara ONIVA01G44840 I
ONIVA11G15310 Oryza nivara ONIVA11G15310 I
OPUNC01G38680 Oryza punctata OPUNC01G38680 I
ORUFI01G43320 Oryza rufipogon ORUFI01G43320 I
ORUFI03G26840 Oryza rufipogon ORUFI03G26840 I
ORUFI05G17830 Oryza rufipogon ORUFI05G17830 I
LBD6 Oryza sativa OS01G0889400 I
OS03G0612400 Oryza sativa OS03G0612400 I
OS05G0417000 Oryza sativa OS05G0417000 I
Pavir.Ea03589 Panicum virgatum Pavir.Ea03589 I
Pavir.Ib03943 Panicum virgatum Pavir.Ib03943 I
Pavir.J03238 Panicum virgatum Pavir.J03238 I
Pavir.J03307 Panicum virgatum Pavir.J03307 I
Pavir.J09541 Panicum virgatum Pavir.J09541 I
Pavir.J16692 Panicum virgatum Pavir.J16692 I
Pavir.J22284 Panicum virgatum Pavir.J22284 I
gw1.170.36.1 Physcomitrella patens gw1.170.36.1 I
gw1.170.40.1 Physcomitrella patens gw1.170.40.1 I
gw1.71.84.1 Physcomitrella patens gw1.71.84.1 I
POPTR_0005s14150 Populus trichocarpa POPTR_0005s14150 I
POPTR_0007s11460 Populus trichocarpa POPTR_0007s11460 I
POPTR_0012s08540 Populus trichocarpa POPTR_0012s08540 I
Pm010483 Prunus mume Pm010483 I
Pm026450 Prunus mume Pm026450 I
PRUPE_ppa015145mg Prunus persica PRUPE_ppa015145mg I
PRUPE_ppa026393mg Prunus persica PRUPE_ppa026393mg I
29676.m001633 Ricinus communis 29676.m001633 I
30147.m013890 Ricinus communis 30147.m013890 I
SapurV1A.0011s0490 Salix purpurea SapurV1A.0011s0490 I
SapurV1A.0428s0090 Salix purpurea SapurV1A.0428s0090 I
SapurV1A.0641s0140 Salix purpurea SapurV1A.0641s0140 I
SapurV1A.0811s0010 Salix purpurea SapurV1A.0811s0010 I
SapurV1A.0811s0020 Salix purpurea SapurV1A.0811s0020 I
SapurV1A.1247s0030 Salix purpurea SapurV1A.1247s0030 I
SELMODRAFT_59324 Selaginella moellendorffii SELMODRAFT_59324 I
SELMODRAFT_68988 Selaginella moellendorffii SELMODRAFT_68988 I
Si002599m.g Setaria italica Si002599m.g I
Si024114m.g Setaria italica Si024114m.g I
Si036905m.g Setaria italica Si036905m.g I
Solyc02g065150.1 Solanum lycopersicum Solyc02g065150.1 I
Solyc02g090410.2 Solanum lycopersicum Solyc02g090410.2 I
PGSC0003DMG400010023 Solanum tuberosum PGSC0003DMG400010023 I
PGSC0003DMG400012629 Solanum tuberosum PGSC0003DMG400012629 I
PGSC0003DMG401000764 Solanum tuberosum PGSC0003DMG401000764 I
PGSC0003DMG402000764 Solanum tuberosum PGSC0003DMG402000764 I
Sb03g042310 Sorghum bicolor Sb03g042310 I
Sb09g020440 Sorghum bicolor Sb09g020440 I
TCM_000560 Theobroma cacao TCM_000560 I
TCM_012190 Theobroma cacao TCM_012190 I
Traes_1AL_4B89B33E3 Triticum aestivum Traes_1AL_4B89B33E3 I
Traes_1DL_1290B6A52 Triticum aestivum Traes_1DL_1290B6A52 I
TRAES3BF084400010CFD_g Triticum aestivum TRAES3BF084400010CFD_g I
Traes_4AL_C060BF9F6 Triticum aestivum Traes_4AL_C060BF9F6 I
Traes_4BS_C1F4F41E9 Triticum aestivum Traes_4BS_C1F4F41E9 I
Traes_4DS_72ABC3EE5 Triticum aestivum Traes_4DS_72ABC3EE5 I
TRIUR3_06488 Triticum urartu TRIUR3_06488 I
TRIUR3_23928 Triticum urartu TRIUR3_23928 I
TRIUR3_32863 Triticum urartu TRIUR3_32863 I
VIT_00s0215g00010 Vitis vinifera VIT_00s0215g00010 I
VIT_00s1247g00010 Vitis vinifera VIT_00s1247g00010 I
VIT_07s0197g00020 Vitis vinifera VIT_07s0197g00020 I
VIT_07s0197g00030 Vitis vinifera VIT_07s0197g00030 I
VIT_07s0197g00040 Vitis vinifera VIT_07s0197g00040 I
LBD25 Vitis vinifera VIT_14s0066g00680 I
VIT_16s0022g02050 Vitis vinifera VIT_16s0022g02050 I
LOB Vitis vinifera VIT_17s0000g09010 I
GRMZM2G118250 Zea mays GRMZM2G118250 I
GRMZM2G154320 Zea mays GRMZM2G154320 N
GRMZM2G362627 Zea mays GRMZM2G362627 I