Traes_1DL_1290B6A52 (Triticum aestivum)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03195 (DUF260) IPR004883 Traes_1DL_1290B6A52 T246156_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LBD6
M06955_2.00 		Arabidopsis thaliana
CGSCGGNDDHDRCGGMGRHDN
NHDYCKCCGYHDHHNCCGSCG		 Dap-seq
OMalley et al.(2016)
AS2_col_a 		0.892 0.892
LOB
M06966_2.00 		Arabidopsis thaliana
NVCGGCGGHRRHDRMGGMGGH
DCCKCCKYHDYYDCCGCCGBN		 Dap-seq
OMalley et al.(2016)
LOB_col_a 		0.769 0.769
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Traes_1DL_1290B6A52.1 LOB 1 65

Links

Other LOB family TFs
Other Triticum aestivum TFs

213 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_21760 Aegilops tauschii F775_21760 I 1.000
MLOC_61156 Hordeum vulgare MLOC_61156 I 1.000
Traes_1AL_4B89B33E3 Triticum aestivum Traes_1AL_4B89B33E3 I 1.000
TRIUR3_23928 Triticum urartu TRIUR3_23928 I 1.000
LBD6 Oryza indica BGIOSGA004955 I 0.985
LPERR01G34430 Leersia perrieri LPERR01G34430 I 0.985
LPERR05G13240 Leersia perrieri LPERR05G13240 I 0.985
OB01G48740 Oryza brachyantha OB01G48740 I 0.985
OBART01G39990 Oryza barthii OBART01G39990 I 0.985
OGLUM01G44190 Oryza glumaepatula OGLUM01G44190 I 0.985
OLONG_016086 Oryza longistaminata OLONG_016086 I 0.985
OMERI01G36900 Oryza meridionalis OMERI01G36900 I 0.985
ONIVA01G44840 Oryza nivara ONIVA01G44840 I 0.985
OPUNC01G38680 Oryza punctata OPUNC01G38680 I 0.985
ORGLA01G0339000 Oryza glaberrima ORGLA01G0339000 I 0.985
ORUFI01G43320 Oryza rufipogon ORUFI01G43320 I 0.985
LBD6 Oryza sativa OS01G0889400 I 0.985
TRIUR3_32863 Triticum urartu TRIUR3_32863 I 0.985
BRADI2G57380 Brachypodium distachyon BRADI2G57380 I 0.969
GRMZM2G118250 Zea mays GRMZM2G118250 I 0.969
Sb03g042310 Sorghum bicolor Sb03g042310 I 0.969
Si002599m.g Setaria italica Si002599m.g I 0.969
Pavir.Ea03589 Panicum virgatum Pavir.Ea03589 I 0.969
Pavir.J16692 Panicum virgatum Pavir.J16692 I 0.969
Pavir.J03238 Panicum virgatum Pavir.J03238 I 0.954
Pavir.J22284 Panicum virgatum Pavir.J22284 I 0.954
Si024114m.g Setaria italica Si024114m.g I 0.938
Gorai.007G350300 Gossypium raimondii Gorai.007G350300 I 0.908
LBD6 Arabidopsis thaliana AT1G65620 D 0.892
Bo2g051420 Brassica oleracea Bo2g051420 I 0.892
Bra039733 Brassica rapa Bra039733 I 0.892
AS2 Arabidopsis lyrata fgenesh2_kg.2__796__AT1G65620.2 I 0.892
GRMZM2G133806 Zea mays GRMZM2G133806 I 0.892
POPTR_0010s18460 Populus trichocarpa POPTR_0010s18460 I 0.892
PRUPE_ppa027059mg Prunus persica PRUPE_ppa027059mg I 0.892
TCM_024217 Theobroma cacao TCM_024217 I 0.892
Cla005851 Citrullus lanatus Cla005851 I 0.892
29929.m004500 Ricinus communis 29929.m004500 I 0.892
cassava1141.valid.m1 Manihot esculenta cassava1141.valid.m1 I 0.892
Cucsa.178830 Cucumis sativus Cucsa.178830 I 0.892
mgf014755m Mimulus guttatus mgf014755m I 0.892
Bostr.26959s0351 Boechera stricta Bostr.26959s0351 I 0.892
Cagra.10809s0001 Capsella grandiflora Cagra.10809s0001 I 0.892
Carubv10020974m.g Capsella rubella Carubv10020974m.g I 0.892
Eucgr.C02148 Eucalyptus grandis Eucgr.C02148 I 0.892
evm.TU.supercontig_39.110 Carica papaya evm.TU.supercontig_39.110 I 0.892
gene21541-v1.0-hybrid Fragaria vesca gene21541-v1.0-hybrid I 0.892
MDP0000273432 Malus domestica MDP0000273432 I 0.892
SapurV1A.0093s0490 Salix purpurea SapurV1A.0093s0490 I 0.892
Thhalv10019572m.g Eutrema salsugineum Thhalv10019572m.g I 0.892
MDP0000643326 Malus domestica MDP0000643326 I 0.877
GLYMA11G17890 Glycine max GLYMA11G17890 I 0.862
Ciclev10017910m.g Citrus clementina Ciclev10017910m.g I 0.862
Lus10013610.g Linum usitatissimum Lus10013610.g I 0.862
orange1.1g027472m.g Citrus sinensis orange1.1g027472m.g I 0.862
GLYMA13G26020 Glycine max GLYMA13G26020 I 0.846
GLYMA15G36310 Glycine max GLYMA15G36310 I 0.846
GRMZM2G096064 Zea mays GRMZM2G096064 I 0.846
MTR_8g040900 Medicago truncatula MTR_8g040900 I 0.846
Ca_20200 Cicer arietinum Ca_20200 I 0.846
TCM_000560 Theobroma cacao TCM_000560 I 0.831
Aquca_007_00083 Aquilegia coerulea Aquca_007_00083 I 0.831
Gorai.007G210500 Gossypium raimondii Gorai.007G210500 I 0.831
Gorai.011G104600 Gossypium raimondii Gorai.011G104600 I 0.831
POPTR_0007s11460 Populus trichocarpa POPTR_0007s11460 I 0.815
cassava16846.m1 Manihot esculenta cassava16846.m1 I 0.815
cassava32691.m1 Manihot esculenta cassava32691.m1 I 0.815
SapurV1A.0641s0140 Salix purpurea SapurV1A.0641s0140 I 0.815
SapurV1A.0811s0020 Salix purpurea SapurV1A.0811s0020 I 0.815
PK18922.1 Cannabis sativa PK18922.1 I 0.807
AC233943.1_FG002 Zea mays AC233943.1_FG002 I 0.800
BRADI2G04270 Brachypodium distachyon BRADI2G04270 I 0.800
F775_25656 Aegilops tauschii F775_25656 I 0.800
GSMUA_Achr3G21730_001 Musa acuminata GSMUA_Achr3G21730_001 N 0.800
LPERR01G04140 Leersia perrieri LPERR01G04140 I 0.800
OB01G14220 Oryza brachyantha OB01G14220 I 0.800
OBART01G04470 Oryza barthii OBART01G04470 I 0.800
OGLUM01G04900 Oryza glumaepatula OGLUM01G04900 I 0.800
OMERI01G04420 Oryza meridionalis OMERI01G04420 I 0.800
ONIVA01G04930 Oryza nivara ONIVA01G04930 I 0.800
ORGLA01G0040900 Oryza glaberrima ORGLA01G0040900 I 0.800
ORUFI01G04670 Oryza rufipogon ORUFI01G04670 I 0.800
OS01G0169400 Oryza sativa OS01G0169400 I 0.800
PGSC0003DMG400010023 Solanum tuberosum PGSC0003DMG400010023 I 0.800
PGSC0003DMG402000764 Solanum tuberosum PGSC0003DMG402000764 I 0.800
POPTR_0005s14150 Populus trichocarpa POPTR_0005s14150 I 0.800
Sb03g004590 Sorghum bicolor Sb03g004590 I 0.800
Si002632m.g Setaria italica Si002632m.g I 0.800
Si036905m.g Setaria italica Si036905m.g I 0.800
Solyc02g065150.1 Solanum lycopersicum Solyc02g065150.1 I 0.800
TRIUR3_10339 Triticum urartu TRIUR3_10339 I 0.800
mgf004296m Mimulus guttatus mgf004296m I 0.800
Ciclev10017006m.g Citrus clementina Ciclev10017006m.g I 0.800
orange1.1g031572m.g Citrus sinensis orange1.1g031572m.g I 0.800
Pavir.Eb00458 Panicum virgatum Pavir.Eb00458 I 0.800
Pavir.Ib03943 Panicum virgatum Pavir.Ib03943 I 0.800
Pavir.J09541 Panicum virgatum Pavir.J09541 I 0.800
Pavir.J38993 Panicum virgatum Pavir.J38993 I 0.800
VIT_00s0215g00010 Vitis vinifera VIT_00s0215g00010 I 0.796
GSMUA_Achr11G26500_001 Musa acuminata GSMUA_Achr11G26500_001 I 0.788
GSMUA_Achr5G25770_001 Musa acuminata GSMUA_Achr5G25770_001 I 0.788
Bo7g064360 Brassica oleracea Bo7g064360 I 0.785
Bra012112 Brassica rapa Bra012112 I 0.785
GLYMA05G02530 Glycine max GLYMA05G02530 I 0.785
GLYMA06G18861 Glycine max GLYMA06G18861 I 0.785
GLYMA17G09380 Glycine max GLYMA17G09380 I 0.785
GRMZM2G154320 Zea mays GRMZM2G154320 N 0.785
GSMUA_Achr6G04670_001 Musa acuminata GSMUA_Achr6G04670_001 I 0.785
LPERR03G21590 Leersia perrieri LPERR03G21590 I 0.785
POPTR_0012s08540 Populus trichocarpa POPTR_0012s08540 I 0.785
POPTR_0015s09370 Populus trichocarpa POPTR_0015s09370 I 0.785
Sb01g014650 Sorghum bicolor Sb01g014650 I 0.785
Solyc02g067800.2 Solanum lycopersicum Solyc02g067800.2 I 0.785
TCM_012190 Theobroma cacao TCM_012190 I 0.785
VIT_00s1247g00010 Vitis vinifera VIT_00s1247g00010 I 0.785
VIT_07s0197g00020 Vitis vinifera VIT_07s0197g00020 I 0.785
LOB Vitis vinifera VIT_17s0000g09010 I 0.785
Cla017388 Citrullus lanatus Cla017388 I 0.785
Cla019510 Citrullus lanatus Cla019510 I 0.785
Cla020438 Citrullus lanatus Cla020438 I 0.785
29676.m001633 Ricinus communis 29676.m001633 I 0.785
30147.m013890 Ricinus communis 30147.m013890 I 0.785
cassava19770.m1 Manihot esculenta cassava19770.m1 I 0.785
cassava33952.m1 Manihot esculenta cassava33952.m1 I 0.785
Cucsa.196600 Cucumis sativus Cucsa.196600 I 0.785
Cucsa.339980 Cucumis sativus Cucsa.339980 I 0.785
Aquca_061_00084 Aquilegia coerulea Aquca_061_00084 I 0.785
Bostr.0568s0111 Boechera stricta Bostr.0568s0111 I 0.785
Cagra.20099s0001 Capsella grandiflora Cagra.20099s0001 I 0.785
Carubv10026811m.g Capsella rubella Carubv10026811m.g I 0.785
Ciclev10027275m.g Citrus clementina Ciclev10027275m.g I 0.785
evm.TU.supercontig_110.17 Carica papaya evm.TU.supercontig_110.17 I 0.785
gene24088-v1.0-hybrid Fragaria vesca gene24088-v1.0-hybrid I 0.785
Gorai.007G075700 Gossypium raimondii Gorai.007G075700 I 0.785
Gorai.008G073400 Gossypium raimondii Gorai.008G073400 I 0.785
MDP0000130659 Malus domestica MDP0000130659 I 0.785
MDP0000254288 Malus domestica MDP0000254288 I 0.785
orange1.1g039589m.g Citrus sinensis orange1.1g039589m.g I 0.785
SapurV1A.0011s0490 Salix purpurea SapurV1A.0011s0490 I 0.785
SapurV1A.1247s0030 Salix purpurea SapurV1A.1247s0030 I 0.785
chr1.CM0171.410.nc Lotus japonicus chr1.CM0171.410.nc I 0.785
chr2.LjT16G06.10.nd Lotus japonicus chr2.LjT16G06.10.nd I 0.785
ASL1 Arabidopsis lyrata fgenesh2_kg.8__2729__AT5G66870.1 I 0.769
GLYMA01G39060 Glycine max GLYMA01G39060 I 0.769
GLYMA06G11181 Glycine max GLYMA06G11181 I 0.769
GLYMA16G07770 Glycine max GLYMA16G07770 I 0.769
GSMUA_Achr7G23710_001 Musa acuminata GSMUA_Achr7G23710_001 I 0.769
MTR_3g077240 Medicago truncatula MTR_3g077240 I 0.769
MTR_7g033800 Medicago truncatula MTR_7g033800 I 0.769
PGSC0003DMG400018112 Solanum tuberosum PGSC0003DMG400018112 I 0.769
PGSC0003DMG401000764 Solanum tuberosum PGSC0003DMG401000764 I 0.769
PRUPE_ppa015145mg Prunus persica PRUPE_ppa015145mg I 0.769
Solyc03g112430.1 Solanum lycopersicum Solyc03g112430.1 I 0.769
TCM_016952 Theobroma cacao TCM_016952 I 0.769
Traes_4BS_C1F4F41E9 Triticum aestivum Traes_4BS_C1F4F41E9 I 0.769
Traes_4DS_72ABC3EE5 Triticum aestivum Traes_4DS_72ABC3EE5 I 0.769
VIT_07s0197g00040 Vitis vinifera VIT_07s0197g00040 I 0.769
Ca_07463 Cicer arietinum Ca_07463 I 0.769
Ca_11161 Cicer arietinum Ca_11161 I 0.769
Ca_24372 Cicer arietinum Ca_24372 I 0.769
Pm010483 Prunus mume Pm010483 I 0.769
gw1.71.84.1 Physcomitrella patens gw1.71.84.1 I 0.769
mgf003146m Mimulus guttatus mgf003146m I 0.769
Ciclev10022371m.g Citrus clementina Ciclev10022371m.g I 0.769
Eucgr.J02237 Eucalyptus grandis Eucgr.J02237 I 0.769
gene28478-v1.0-hybrid Fragaria vesca gene28478-v1.0-hybrid I 0.769
gene30401-v1.0-hybrid Fragaria vesca gene30401-v1.0-hybrid I 0.769
gene31797-v1.0-hybrid Fragaria vesca gene31797-v1.0-hybrid I 0.769
Gorai.006G033100 Gossypium raimondii Gorai.006G033100 I 0.769
Lus10005313.g Linum usitatissimum Lus10005313.g I 0.769
Lus10027676.g Linum usitatissimum Lus10027676.g I 0.769
Lus10039940.g Linum usitatissimum Lus10039940.g I 0.769
MDP0000310871 Malus domestica MDP0000310871 I 0.769
MDP0000848210 Malus domestica MDP0000848210 I 0.769
orange1.1g036845m.g Citrus sinensis orange1.1g036845m.g I 0.769
Thhalv10004535m.g Eutrema salsugineum Thhalv10004535m.g I 0.769
LBD25 Arabidopsis thaliana AT3G27650 I 0.754
Bo7g085860 Brassica oleracea Bo7g085860 I 0.754
F775_33210 Aegilops tauschii F775_33210 I 0.754
LBD25 Arabidopsis lyrata fgenesh2_kg.5__545__AT3G27650.1 I 0.754
GRMZM2G362627 Zea mays GRMZM2G362627 I 0.754
TRIUR3_06488 Triticum urartu TRIUR3_06488 I 0.754
Ca_02124 Cicer arietinum Ca_02124 I 0.754
Ca_02125 Cicer arietinum Ca_02125 I 0.754
Bostr.0556s0446 Boechera stricta Bostr.0556s0446 I 0.754
Cagra.5575s0004 Capsella grandiflora Cagra.5575s0004 I 0.754
Carubv10018238m.g Capsella rubella Carubv10018238m.g I 0.754
MDP0000777060 Malus domestica MDP0000777060 I 0.754
LjSGA_042891.1 Lotus japonicus LjSGA_042891.1 I 0.754
Bo2g144870 Brassica oleracea Bo2g144870 I 0.738
Bra033019 Brassica rapa Bra033019 I 0.738
BRADI1G14677 Brachypodium distachyon BRADI1G14677 N 0.738
LBD25 Vitis vinifera VIT_14s0066g00680 I 0.738
Cla010600 Citrullus lanatus Cla010600 I 0.738
Cucsa.098680 Cucumis sativus Cucsa.098680 I 0.738
gw1.12.172.1 Physcomitrella patens gw1.12.172.1 I 0.738
Bostr.27895s0126 Boechera stricta Bostr.27895s0126 N 0.738
Gorai.012G063800 Gossypium raimondii Gorai.012G063800 I 0.738
SapurV1A.0811s0010 Salix purpurea SapurV1A.0811s0010 I 0.738
Thhalv10005120m.g Eutrema salsugineum Thhalv10005120m.g I 0.738
Bo4g151770 Brassica oleracea Bo4g151770 I 0.723
Bra032153 Brassica rapa Bra032153 I 0.723
GSMUA_Achr2G13400_001 Musa acuminata GSMUA_Achr2G13400_001 I 0.723
GSMUA_Achr2G23130_001 Musa acuminata GSMUA_Achr2G23130_001 I 0.723
MTR_3g073690 Medicago truncatula MTR_3g073690 I 0.723
MTR_6g005080 Medicago truncatula MTR_6g005080 I 0.723
PGSC0003DMG400027078 Solanum tuberosum PGSC0003DMG400027078 I 0.723
Solyc06g071660.1 Solanum lycopersicum Solyc06g071660.1 I 0.723
mgf024603m Mimulus guttatus mgf024603m I 0.723
Cagra.2475s0001 Capsella grandiflora Cagra.2475s0001 I 0.723
Carubv10025704m.g Capsella rubella Carubv10025704m.g I 0.723
MTR_3g452660 Medicago truncatula MTR_3g452660 N 0.708
PK13228.1 Cannabis sativa PK13228.1 I 0.708