CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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nAv.1.0.1.g02191
(
Acanthocheilonema viteae
)
Brinker
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF09607 (BrkDBD)
IPR018586
nAv.1.0.1.g02191
T055905_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
nAv.1.0.1.t02191-RA
Brinker
303
355
NRMSYPREFKLMVINYYYTNGQNKYRTCKEFQITKSMLNGWLQKIDKIRQSRP
Links
Other
Brinker
family TFs
Other
Acanthocheilonema viteae
TFs
48 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
nAv.1.0.1.g08227
Acanthocheilonema viteae
nAv.1.0.1.g08227
N
AMAG_00757
Allomyces macrogynus
AMAG_00757
N
AMAG_02260
Allomyces macrogynus
AMAG_02260
N
AMTR_s00029p00240750
Amborella trichopoda
AMTR_s00029p00240750
I
AMTR_s00044p00160130
Amborella trichopoda
AMTR_s00044p00160130
I
ANCCEY_04224
Ancylostoma ceylanicum
ANCCEY_04224
N
ANCDUO_12352
Ancylostoma duodenale
ANCDUO_12352
N
ACAC_0000817201
Angiostrongylus cantonensis
ACAC_0000817201
N
ACOC_0000235301
Angiostrongylus costaricensis
ACOC_0000235301
N
ASIM_0001178701
Anisakis simplex
ASIM_0001178701
N
GB47837
Apis mellifera
GB47837
N
Aquca_004_00335
Aquilegia coerulea
Aquca_004_00335
I
Aquca_015_00344
Aquilegia coerulea
Aquca_015_00344
I
Aquca_045_00054
Aquilegia coerulea
Aquca_045_00054
I
HMGB1
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_5001281
I
HMGB2
Arabidopsis lyrata
fgenesh2_kg.1__2255__AT1G20693.2
I
HMGB3
Arabidopsis lyrata
fgenesh2_kg.1__2258__AT1G20696.3
I
HMGB4
Arabidopsis lyrata
fgenesh2_kg.3__3350__AT2G17560.1
I
HMGB2
Arabidopsis thaliana
AT1G20693
I
HMGB3
Arabidopsis thaliana
AT1G20696
I
SSRP1
Arabidopsis thaliana
AT3G28730
I
HMGB1
Arabidopsis thaliana
AT3G51880
I
ALUE_0000365901
Ascaris lumbricoides
ALUE_0000365901
N
ASU_05994
Ascaris suum
ASU_05994
N
ASU_09087
Ascaris suum
ASU_09087
N
ACEP16621
Atta cephalotes
ACEP16621
N
Bostr.0556s0524
Boechera stricta
Bostr.0556s0524
I
Bostr.18351s0219
Boechera stricta
Bostr.18351s0219
I
Bostr.6864s0060
Boechera stricta
Bostr.6864s0060
I
Bostr.7128s0662
Boechera stricta
Bostr.7128s0662
I
Bostr.7128s0663
Boechera stricta
Bostr.7128s0663
I
BRADI3G51140
Brachypodium distachyon
BRADI3G51140
N
BRADI4G37247
Brachypodium distachyon
BRADI4G37247
I
Bo5g030580
Brassica oleracea
Bo5g030580
I
Bo7g061420
Brassica oleracea
Bo7g061420
I
Bo7g101270
Brassica oleracea
Bo7g101270
I
Bo8g070350
Brassica oleracea
Bo8g070350
I
Bo8g081200
Brassica oleracea
Bo8g081200
I
Bra002073
Brassica rapa
Bra002073
I
Bra025350
Brassica rapa
Bra025350
N
Bra025838
Brassica rapa
Bra025838
I
Bra037266
Brassica rapa
Bra037266
I
Bm8632
Brugia malayi
Bm8632
N
BTMF_0001080901
Brugia timori
BTMF_0001080901
N
BXY_1081800
Bursaphelenchus xylophilus
BXY_1081800
I
BXY_1081900
Bursaphelenchus xylophilus
BXY_1081900
I
CBN25379
Caenorhabditis brenneri
CBN25379
I
hmg-1.1
Caenorhabditis elegans
WBGene00001971
N
CJA04355
Caenorhabditis japonica
CJA04355
N
CRE11852
Caenorhabditis remanei
CRE11852
N
Cflo_05893--XP_624266.1_APIME
Camponotus floridanus
Cflo_05893--XP_624266.1_APIME
N
Cagra.0535s0005
Capsella grandiflora
Cagra.0535s0005
I
Cagra.1043s0022
Capsella grandiflora
Cagra.1043s0022
I
Cagra.1891s0017
Capsella grandiflora
Cagra.1891s0017
I
Cagra.6160s0027
Capsella grandiflora
Cagra.6160s0027
I
Cagra.6160s0028
Capsella grandiflora
Cagra.6160s0028
I
Carubv10010586m.g
Capsella rubella
Carubv10010586m.g
I
Carubv10012681m.g
Capsella rubella
Carubv10012681m.g
I
Carubv10014808m.g
Capsella rubella
Carubv10014808m.g
I
Carubv10016819m.g
Capsella rubella
Carubv10016819m.g
I
Carubv10018109m.g
Capsella rubella
Carubv10018109m.g
I
evm.TU.supercontig_211.6
Carica papaya
evm.TU.supercontig_211.6
I
evm.TU.supercontig_26.174
Carica papaya
evm.TU.supercontig_26.174
I
Ca_09896
Cicer arietinum
Ca_09896
I
Cla009093
Citrullus lanatus
Cla009093
I
Cla009222
Citrullus lanatus
Cla009222
I
Cla018386
Citrullus lanatus
Cla018386
I
Ciclev10002782m.g
Citrus clementina
Ciclev10002782m.g
I
Ciclev10016587m.g
Citrus clementina
Ciclev10016587m.g
N
Ciclev10026715m.g
Citrus clementina
Ciclev10026715m.g
I
Ciclev10032930m.g
Citrus clementina
Ciclev10032930m.g
I
orange1.1g026850m.g
Citrus sinensis
orange1.1g026850m.g
N
orange1.1g029982m.g
Citrus sinensis
orange1.1g029982m.g
I
orange1.1g031906m.g
Citrus sinensis
orange1.1g031906m.g
I
orange1.1g031973m.g
Citrus sinensis
orange1.1g031973m.g
I
Cucsa.067200
Cucumis sativus
Cucsa.067200
I
Cucsa.300030
Cucumis sativus
Cucsa.300030
I
Cucsa.323100
Cucumis sativus
Cucsa.323100
I
DICVIV_05502
Dictyocaulus viviparus
DICVIV_05502
N
nDi.2.2.2.g08508
Dirofilaria immitis
nDi.2.2.2.g08508
N
DME_0000779601
Dracunculus medinensis
DME_0000779601
N
GF12460
Drosophila ananassae
FBgn0089497
N
GG19998
Drosophila erecta
FBgn0112197
N
GH21151
Drosophila grimshawi
FBgn0128613
N
Ssrp
Drosophila melanogaster
FBgn0010278
N
GI18750
Drosophila mojavensis
FBgn0141489
N
GL11071
Drosophila persimilis
FBgn0148681
N
Ssrp
Drosophila pseudoobscura
FBgn0078456
N
GD25013
Drosophila simulans
FBgn0196325
N
GJ21774
Drosophila virilis
FBgn0208892
N
GK22092
Drosophila willistoni
FBgn0224077
N
GE11532
Drosophila yakuba
FBgn0229332
N
ECPE_0000536801
Echinostoma caproni
ECPE_0000536801
N
ETH_00027140
Eimeria tenella
ETH_00027140
I
ETH_00031100
Eimeria tenella
ETH_00031100
I
Eucgr.F03571
Eucalyptus grandis
Eucgr.F03571
I
Eucgr.J02535
Eucalyptus grandis
Eucgr.J02535
I
Thhalv10003803m.g
Eutrema salsugineum
Thhalv10003803m.g
I
Thhalv10009371m.g
Eutrema salsugineum
Thhalv10009371m.g
I
Thhalv10009970m.g
Eutrema salsugineum
Thhalv10009970m.g
I
Thhalv10010751m.g
Eutrema salsugineum
Thhalv10010751m.g
I
Thhalv10022905m.g
Eutrema salsugineum
Thhalv10022905m.g
I
D915_02473
Fasciola hepatica
D915_02473
N
gene13043-v1.0-hybrid
Fragaria vesca
gene13043-v1.0-hybrid
I
GLYMA04G01840
Glycine max
GLYMA04G01840
I
GLYMA06G01970
Glycine max
GLYMA06G01970
I
Gorai.002G115100
Gossypium raimondii
Gorai.002G115100
I
Gorai.005G114500
Gossypium raimondii
Gorai.005G114500
I
Gorai.008G147700
Gossypium raimondii
Gorai.008G147700
I
Gorai.009G186800
Gossypium raimondii
Gorai.009G186800
I
HCOI01550200
Haemonchus contortus
HCOI01550200
N
HCOI01912600
Haemonchus contortus
HCOI01912600
I
HPLM_0001324601
Haemonchus placei
HPLM_0001324601
N
Hsal_13112--XP_624266.1_APIME
Harpegnathos saltator
Hsal_13112--XP_624266.1_APIME
N
LPERR08G00140
Leersia perrieri
LPERR08G00140
N
LDEC020995
Leptinotarsa decemlineata
LDEC020995
N
Lus10012252.g
Linum usitatissimum
Lus10012252.g
I
Lus10016025.g
Linum usitatissimum
Lus10016025.g
I
nLs.2.1.2.g04082
Litomosoides sigmodontis
nLs.2.1.2.g04082
N
LOAG_08062
Loa loa
LOAG_08062
N
chr1.CM0113.560.nc
Lotus japonicus
chr1.CM0113.560.nc
I
ENSMMUG00000031258
Macaca mulatta
ENSMMUG00000031258
I
MDP0000205665
Malus domestica
MDP0000205665
I
MDP0000275042
Malus domestica
MDP0000275042
I
MDP0000310093
Malus domestica
MDP0000310093
I
MDP0000362980
Malus domestica
MDP0000362980
I
MDP0000607529
Malus domestica
MDP0000607529
I
MDP0000757111
Malus domestica
MDP0000757111
I
cassava18624.valid.m1
Manihot esculenta
cassava18624.valid.m1
I
cassava18625.valid.m1
Manihot esculenta
cassava18625.valid.m1
I
cassava18626.valid.m1
Manihot esculenta
cassava18626.valid.m1
I
cassava23716.valid.m1
Manihot esculenta
cassava23716.valid.m1
I
cassava24859.valid.m1
Manihot esculenta
cassava24859.valid.m1
I
cassava35948.valid.m1
Manihot esculenta
cassava35948.valid.m1
I
MTR_3g115580
Medicago truncatula
MTR_3g115580
I
MTR_5g024180
Medicago truncatula
MTR_5g024180
I
MTR_5g082570
Medicago truncatula
MTR_5g082570
I
MTR_7g068280
Medicago truncatula
MTR_7g068280
I
MTR_8g073345
Medicago truncatula
MTR_8g073345
I
mgf000913m
Mimulus guttatus
mgf000913m
I
mgf006113m
Mimulus guttatus
mgf006113m
I
mgf008076m
Mimulus guttatus
mgf008076m
I
mgf009330m
Mimulus guttatus
mgf009330m
I
mgf014518m
Mimulus guttatus
mgf014518m
I
mgf016608m
Mimulus guttatus
mgf016608m
I
mgf024995m
Mimulus guttatus
mgf024995m
I
GSMUA_Achr2G11060_001
Musa acuminata
GSMUA_Achr2G11060_001
I
GSMUA_Achr4G25860_001
Musa acuminata
GSMUA_Achr4G25860_001
I
GSMUA_Achr5G11630_001
Musa acuminata
GSMUA_Achr5G11630_001
I
MDOA007633
Musca domestica
MDOA007633
N
NECAME_17555
Necator americanus
NECAME_17555
N
NECAME_17981
Necator americanus
NECAME_17981
N
NCLIV_043670
Neospora caninum
NCLIV_043670
I
NBR_0001277401
Nippostrongylus brasiliensis
NBR_0001277401
N
OESDEN_09619
Oesophagostomum dentatum
OESDEN_09619
N
OESDEN_24828
Oesophagostomum dentatum
OESDEN_24828
N
SNAPOd2T00000181001
Oikopleura dioica
SNAPOd2T00000181001
N
SNAPOd2T00016002001
Oikopleura dioica
SNAPOd2T00016002001
N
OFLC_0000261801
Onchocerca flexuosa
OFLC_0000261801
N
nOo.2.0.1.g04208
Onchocerca ochengi
nOo.2.0.1.g04208
N
nOo.2.0.1.g04693
Onchocerca ochengi
nOo.2.0.1.g04693
N
WBGene00238628
Onchocerca volvulus
WBGene00238628
N
OBART02G27340
Oryza barthii
OBART02G27340
N
OBART08G00070
Oryza barthii
OBART08G00070
I
OB02G34710
Oryza brachyantha
OB02G34710
N
OB08G10120
Oryza brachyantha
OB08G10120
N
OGLUM02G27900
Oryza glumaepatula
OGLUM02G27900
N
OGLUM08G00090
Oryza glumaepatula
OGLUM08G00090
I
BGIOSGA008782
Oryza indica
BGIOSGA008782
N
BGIOSGA027814
Oryza indica
BGIOSGA027814
I
BGIOSGA027819
Oryza indica
BGIOSGA027819
I
OLONG_014445
Oryza longistaminata
OLONG_014445
I
OMERI02G26620
Oryza meridionalis
OMERI02G26620
N
ONIVA02G29880
Oryza nivara
ONIVA02G29880
N
ONIVA08G00070
Oryza nivara
ONIVA08G00070
I
OPUNC02G25020
Oryza punctata
OPUNC02G25020
N
OPUNC08G00150
Oryza punctata
OPUNC08G00150
I
ORUFI02G28820
Oryza rufipogon
ORUFI02G28820
N
ORUFI08G00080
Oryza rufipogon
ORUFI08G00080
I
OS02G0670400
Oryza sativa
OS02G0670400
N
OS08G0101100
Oryza sativa
OS08G0101100
I
OSTLU_18991
Ostreococcus lucimarinus
OSTLU_18991
N
OSTLU_31946
Ostreococcus lucimarinus
OSTLU_31946
I
gw1.6.1665.1
Ostreococcus RCC809
gw1.6.1665.1
I
ENSOGAG00000026034
Otolemur garnettii
ENSOGAG00000026034
I
ENSOGAG00000031524
Otolemur garnettii
ENSOGAG00000031524
I
PTRK_0001161700
Parastrongyloides trichosuri
PTRK_0001161700
N
PTRK_0001490800
Parastrongyloides trichosuri
PTRK_0001490800
N
PPAI002521
Phlebotomus papatasi
PPAI002521
N
PDK_20s1306741g001
Phoenix dactylifera
PDK_20s1306741g001
I
estExt_fgenesh1_pg.C_2230007
Physcomitrella patens
estExt_fgenesh1_pg.C_2230007
I
fgenesh1_pg.scaffold_277000017
Physcomitrella patens
fgenesh1_pg.scaffold_277000017
I
HMG-1
Pisum sativum
Q41026_PEA
D
POPTR_0002s01000
Populus trichocarpa
POPTR_0002s01000
I
POPTR_0005s10440
Populus trichocarpa
POPTR_0005s10440
I
XM_002306945.1
Populus trichocarpa
POPTR_0005s27390
I
POPTR_0008s06730
Populus trichocarpa
POPTR_0008s06730
I
POPTR_0010s19720
Populus trichocarpa
POPTR_0010s19720
I
scaffold113-EXSNAP2012.49
Pristionchus exspectatus
scaffold113-EXSNAP2012.49
N
scaffold1425-EXSNAP2012.3
Pristionchus exspectatus
scaffold1425-EXSNAP2012.3
N
Ppa-hmg-1.1
Pristionchus pacificus
PPA22767
N
Pm006054
Prunus mume
Pm006054
I
Pm018913
Prunus mume
Pm018913
I
Pm026798
Prunus mume
Pm026798
I
PRUPE_ppa011596mg
Prunus persica
PRUPE_ppa011596mg
I
PRUPE_ppa012424mg
Prunus persica
PRUPE_ppa012424mg
I
PRUPE_ppa012972mg
Prunus persica
PRUPE_ppa012972mg
I
PRUPE_ppa026912mg
Prunus persica
PRUPE_ppa026912mg
I
AABR07009373.1
Rattus norvegicus
ENSRNOG00000011429
I
RSKR_0000587700
Rhabditophanes kr3021
RSKR_0000587700
N
29600.m000548
Ricinus communis
29600.m000548
I
29669.m000844
Ricinus communis
29669.m000844
I
30170.m014386
Ricinus communis
30170.m014386
I
SapurV1A.0016s0600
Salix purpurea
SapurV1A.0016s0600
I
SapurV1A.0085s0030
Salix purpurea
SapurV1A.0085s0030
I
SapurV1A.0266s0310
Salix purpurea
SapurV1A.0266s0310
I
SapurV1A.0766s0120
Salix purpurea
SapurV1A.0766s0120
I
SapurV1A.0825s0160
Salix purpurea
SapurV1A.0825s0160
I
SELMODRAFT_18312
Selaginella moellendorffii
SELMODRAFT_18312
I
SELMODRAFT_18313
Selaginella moellendorffii
SELMODRAFT_18313
I
Solyc02g082700.2
Solanum lycopersicum
Solyc02g082700.2
I
Solyc04g008820.2
Solanum lycopersicum
Solyc04g008820.2
I
PGSC0003DMG400001567
Solanum tuberosum
PGSC0003DMG400001567
I
PGSC0003DMG400018685
Solanum tuberosum
PGSC0003DMG400018685
I
PGSC0003DMG400025304
Solanum tuberosum
PGSC0003DMG400025304
I
SINV22588
Solenopsis invicta
SINV22588
N
L596_g16476
Steinernema carpocapsae
L596_g16476
N
L596_g28088
Steinernema carpocapsae
L596_g28088
N
L889_g16198
Steinernema feltiae
L889_g16198
N
L889_g9094
Steinernema feltiae
L889_g9094
N
L893_g23503
Steinernema glaseri
L893_g23503
N
L893_g29974
Steinernema glaseri
L893_g29974
N
L898_g4830
Steinernema monticolum
L898_g4830
N
L898_g7743
Steinernema monticolum
L898_g7743
N
L892_g19058
Steinernema scapterisci
L892_g19058
N
L892_g23618
Steinernema scapterisci
L892_g23618
N
SPAL_0000986100
Strongyloides papillosus
SPAL_0000986100
N
SPAL_0001085700
Strongyloides papillosus
SPAL_0001085700
N
SSTP_0000585600
Strongyloides stercoralis
SSTP_0000585600
N
SSTP_0001024100
Strongyloides stercoralis
SSTP_0001024100
N
SVE_0294800
Strongyloides venezuelensis
SVE_0294800
N
SVE_0954900
Strongyloides venezuelensis
SVE_0954900
N
TSTA_074230
Talaromyces stipitatus
TSTA_074230
N
TELCIR_02603
Teladorsagia circumcincta
TELCIR_02603
N
tetur02g08250
Tetranychus urticae
tetur02g08250
N
TCM_000068
Theobroma cacao
TCM_000068
I
TCM_007659
Theobroma cacao
TCM_007659
I
TCM_034406
Theobroma cacao
TCM_034406
I
TCNE_0000332201
Toxocara canis
TCNE_0000332201
N
TCNE_0001025901
Toxocara canis
TCNE_0001025901
N
TGME49_010410
Toxoplasma gondii
TGME49_010410
I
Traes_5BL_9CC98DD38
Triticum aestivum
Traes_5BL_9CC98DD38
I
Traes_5DL_DD9491112
Triticum aestivum
Traes_5DL_DD9491112
I
VIT_04s0044g00110
Vitis vinifera
VIT_04s0044g00110
I
HMGB6
Vitis vinifera
VIT_10s0071g00870
I
VIT_13s0067g00640
Vitis vinifera
VIT_13s0067g00640
I
VIT_18s0122g01190
Vitis vinifera
VIT_18s0122g01190
I
WUBG_16399
Wuchereria bancrofti
WUBG_16399
N