ORUFI09G04060 (Oryza rufipogon)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ORUFI09G04060 T125179_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
ORUFI09G04060.1 C2H2 ZF 239 260
ORUFI09G04060.1 C2H2 ZF 260 285

Links

Other C2H2 ZF family TFs
Other Oryza rufipogon TFs

182 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00022p00243980 Amborella trichopoda AMTR_s00022p00243980 N 0.774
AMTR_s00093p00164790 Amborella trichopoda AMTR_s00093p00164790 N 0.808
Aquca_026_00228 Aquilegia coerulea Aquca_026_00228 N 0.784
NTT Arabidopsis lyrata fgenesh2_kg.5__2209__AT3G57670.1 N 0.774
WIP6 Arabidopsis thaliana AT1G13290 N 0.784
WIP2 Arabidopsis thaliana AT3G57670 N 0.774
Bostr.13671s0117 Boechera stricta Bostr.13671s0117 N 0.784
Bostr.20903s0019 Boechera stricta Bostr.20903s0019 N 0.774
BRADI1G36067 Brachypodium distachyon BRADI1G36067 N 0.766
BRADI4G27770 Brachypodium distachyon BRADI4G27770 N 0.792
Bo4g111000 Brassica oleracea Bo4g111000 N 0.774
Bo5g015200 Brassica oleracea Bo5g015200 N 0.784
Bo5g081360 Brassica oleracea Bo5g081360 N 0.762
Bo6g073120 Brassica oleracea Bo6g073120 N 0.774
Bo8g092070 Brassica oleracea Bo8g092070 N 0.774
Bra003295 Brassica rapa Bra003295 N 0.774
Bra007346 Brassica rapa Bra007346 N 0.772
Bra014612 Brassica rapa Bra014612 N 0.774
Bra019822 Brassica rapa Bra019822 N 0.784
PK03705.1 Cannabis sativa PK03705.1 N 0.774
Cagra.0210s0004 Capsella grandiflora Cagra.0210s0004 N 0.774
Cagra.3501s0170 Capsella grandiflora Cagra.3501s0170 N 0.784
Carubv10012013m.g Capsella rubella Carubv10012013m.g N 0.784
Carubv10017428m.g Capsella rubella Carubv10017428m.g N 0.774
evm.TU.supercontig_1.215 Carica papaya evm.TU.supercontig_1.215 N 0.784
evm.TU.supercontig_84.74 Carica papaya evm.TU.supercontig_84.74 N 0.774
Ca_07269 Cicer arietinum Ca_07269 N 0.774
Ca_08435 Cicer arietinum Ca_08435 N 0.784
Ca_21713 Cicer arietinum Ca_21713 N 0.784
Ca_24699 Cicer arietinum Ca_24699 N 0.784
Ca_27078 Cicer arietinum Ca_27078 N 0.758
Cla000184 Citrullus lanatus Cla000184 N 0.758
Cla002714 Citrullus lanatus Cla002714 N 0.784
Cla008187 Citrullus lanatus Cla008187 N 0.774
Cla008675 Citrullus lanatus Cla008675 N 0.774
Ciclev10003648m.g Citrus clementina Ciclev10003648m.g N 0.758
Ciclev10005189m.g Citrus clementina Ciclev10005189m.g N 0.774
Ciclev10017716m.g Citrus clementina Ciclev10017716m.g N 0.774
Ciclev10033535m.g Citrus clementina Ciclev10033535m.g N 0.774
orange1.1g019587m.g Citrus sinensis orange1.1g019587m.g N 0.774
orange1.1g037179m.g Citrus sinensis orange1.1g037179m.g N 0.758
orange1.1g040794m.g Citrus sinensis orange1.1g040794m.g N 0.774
orange1.1g046329m.g Citrus sinensis orange1.1g046329m.g N 0.774
Cucsa.199850 Cucumis sativus Cucsa.199850 N 0.758
Cucsa.242970 Cucumis sativus Cucsa.242970 N 0.774
Cucsa.248320 Cucumis sativus Cucsa.248320 N 0.784
Cucsa.357260 Cucumis sativus Cucsa.357260 N 0.774
Eucgr.A02400 Eucalyptus grandis Eucgr.A02400 N 0.774
Eucgr.B03047 Eucalyptus grandis Eucgr.B03047 N 0.808
Eucgr.F00336 Eucalyptus grandis Eucgr.F00336 N 0.772
Eucgr.J00788 Eucalyptus grandis Eucgr.J00788 N 0.784
Thhalv10006035m.g Eutrema salsugineum Thhalv10006035m.g N 0.774
Thhalv10009489m.g Eutrema salsugineum Thhalv10009489m.g N 0.784
gene03867-v1.0-hybrid Fragaria vesca gene03867-v1.0-hybrid N 0.774
gene14361-v1.0-hybrid Fragaria vesca gene14361-v1.0-hybrid N 0.774
gene20598-v1.0-hybrid Fragaria vesca gene20598-v1.0-hybrid N 0.774
GLYMA01G22120 Glycine max GLYMA01G22120 N 0.784
GLYMA02G10970 Glycine max GLYMA02G10970 N 0.784
GLYMA02G31270 Glycine max GLYMA02G31270 N 0.774
GLYMA10G34770 Glycine max GLYMA10G34770 N 0.784
GLYMA13G01720 Glycine max GLYMA13G01720 N 0.758
GLYMA14G35140 Glycine max GLYMA14G35140 N 0.758
GLYMA19G32430 Glycine max GLYMA19G32430 N 0.774
GLYMA20G32750 Glycine max GLYMA20G32750 N 0.784
Gorai.002G152600 Gossypium raimondii Gorai.002G152600 N 0.774
Gorai.003G089200 Gossypium raimondii Gorai.003G089200 N 0.774
Gorai.006G138700 Gossypium raimondii Gorai.006G138700 N 0.774
Gorai.010G039600 Gossypium raimondii Gorai.010G039600 N 0.758
Gorai.013G080100 Gossypium raimondii Gorai.013G080100 N 0.784
Gorai.013G250800 Gossypium raimondii Gorai.013G250800 N 0.784
MLOC_54308 Hordeum vulgare MLOC_54308 N 0.792
MLOC_65351 Hordeum vulgare MLOC_65351 N 0.790
LPERR06G17470 Leersia perrieri LPERR06G17470 N 0.766
LPERR09G03450 Leersia perrieri LPERR09G03450 N 0.792
Lus10021700.g Linum usitatissimum Lus10021700.g N 0.784
Lus10031271.g Linum usitatissimum Lus10031271.g N 0.774
Lus10031838.g Linum usitatissimum Lus10031838.g N 0.774
Lus10033454.g Linum usitatissimum Lus10033454.g N 0.758
Lus10035044.g Linum usitatissimum Lus10035044.g N 0.784
chr1.CM0318.720.nd Lotus japonicus chr1.CM0318.720.nd N 0.774
chr2.CM1731.90.nc Lotus japonicus chr2.CM1731.90.nc N 0.784
LjSGA_032817.1 Lotus japonicus LjSGA_032817.1 N 0.782
MDP0000303483 Malus domestica MDP0000303483 N 0.784
MDP0000403797 Malus domestica MDP0000403797 N 0.774
MDP0000580545 Malus domestica MDP0000580545 N 0.774
MDP0000601705 Malus domestica MDP0000601705 N 0.774
MDP0000899280 Malus domestica MDP0000899280 N 0.774
cassava34009.m1 Manihot esculenta cassava34009.m1 N 0.759
cassava35956.valid.m1 Manihot esculenta cassava35956.valid.m1 N 0.774
cassava41737.m1 Manihot esculenta cassava41737.m1 N 0.774
cassava44390.m1 Manihot esculenta cassava44390.m1 N 0.758
cassava46219.m1 Manihot esculenta cassava46219.m1 N 0.784
cassava5227.m1 Manihot esculenta cassava5227.m1 N 0.764
MTR_1g093095 Medicago truncatula MTR_1g093095 N 0.784
mgf019910m Mimulus guttatus mgf019910m N 0.774
mgf022319m Mimulus guttatus mgf022319m N 0.768
GSMUA_Achr11G18950_001 Musa acuminata GSMUA_Achr11G18950_001 N 0.778
GSMUA_Achr3G11050_001 Musa acuminata GSMUA_Achr3G11050_001 N 0.764
GSMUA_Achr3G11870_001 Musa acuminata GSMUA_Achr3G11870_001 N 0.784
GSMUA_Achr6G01410_001 Musa acuminata GSMUA_Achr6G01410_001 N 0.792
GSMUA_Achr6G03470_001 Musa acuminata GSMUA_Achr6G03470_001 N 0.764
GSMUA_Achr8G25650_001 Musa acuminata GSMUA_Achr8G25650_001 N 0.778
GSMUA_AchrUn_randomG20320_001 Musa acuminata GSMUA_AchrUn_randomG20320_001 N 0.774
GSMUA_AchrUn_randomG22660_001 Musa acuminata GSMUA_AchrUn_randomG22660_001 N 0.774
OBART02G07320 Oryza barthii OBART02G07320 N 0.787
OBART06G20890 Oryza barthii OBART06G20890 N 0.790
OBART09G03640 Oryza barthii OBART09G03640 N 0.827
OB06G28740 Oryza brachyantha OB06G28740 N 0.766
ORGLA02G0068500 Oryza glaberrima ORGLA02G0068500 N 0.787
ORGLA06G0173600 Oryza glaberrima ORGLA06G0173600 N 0.766
ORGLA09G0176200 Oryza glaberrima ORGLA09G0176200 N 0.827
OGLUM06G22000 Oryza glumaepatula OGLUM06G22000 N 0.766
OGLUM09G04400 Oryza glumaepatula OGLUM09G04400 N 0.827
OGLUM09G05550 Oryza glumaepatula OGLUM09G05550 N 0.792
BGIOSGA023262 Oryza indica BGIOSGA023262 N 0.766
BGIOSGA030081 Oryza indica BGIOSGA030081 N 0.827
BGIOSGA030484 Oryza indica BGIOSGA030484 N 0.792
OMERI09G02890 Oryza meridionalis OMERI09G02890 N 0.827
OMERI09G03940 Oryza meridionalis OMERI09G03940 N 0.792
ONIVA02G14580 Oryza nivara ONIVA02G14580 N 0.827
ONIVA06G24670 Oryza nivara ONIVA06G24670 N 0.766
ONIVA08G08420 Oryza nivara ONIVA08G08420 N 0.792
OPUNC06G19020 Oryza punctata OPUNC06G19020 N 0.766
OPUNC09G03280 Oryza punctata OPUNC09G03280 N 0.827
OPUNC09G04260 Oryza punctata OPUNC09G04260 N 0.792
ORUFI06G22350 Oryza rufipogon ORUFI06G22350 N 0.766
ORUFI09G05390 Oryza rufipogon ORUFI09G05390 N 0.792
OS02G0196100 Oryza sativa OS02G0196100 N 0.763
OS06G0612300 Oryza sativa OS06G0612300 N 0.766
OS09G0307400 Oryza sativa OS09G0307400 N 0.792
Pavir.Ba03009 Panicum virgatum Pavir.Ba03009 N 0.792
Pavir.Db00765 Panicum virgatum Pavir.Db00765 N 0.766
e_gw1.203.23.1 Physcomitrella patens e_gw1.203.23.1 N 0.784
gw1.359.34.1 Physcomitrella patens gw1.359.34.1 N 0.784
POPTR_0003s20400 Populus trichocarpa POPTR_0003s20400 N 0.764
POPTR_0010s13910 Populus trichocarpa POPTR_0010s13910 N 0.784
POPTR_0016s05310 Populus trichocarpa POPTR_0016s05310 N 0.774
Pm000471 Prunus mume Pm000471 N 0.774
Pm025853 Prunus mume Pm025853 N 0.774
Pm029018 Prunus mume Pm029018 N 0.784
PRUPE_ppa008185mg Prunus persica PRUPE_ppa008185mg N 0.774
PRUPE_ppa020013m2g Prunus persica PRUPE_ppa020013m2g N 0.784
PRUPE_ppa024429mg Prunus persica PRUPE_ppa024429mg N 0.774
27810.m000651 Ricinus communis 27810.m000651 N 0.774
29908.m006047 Ricinus communis 29908.m006047 N 0.758
30169.m006417 Ricinus communis 30169.m006417 N 0.764
SapurV1A.0009s0540 Salix purpurea SapurV1A.0009s0540 N 0.764
SapurV1A.0018s0090 Salix purpurea SapurV1A.0018s0090 N 0.774
SELMODRAFT_110681 Selaginella moellendorffii SELMODRAFT_110681 N 0.784
SELMODRAFT_128378 Selaginella moellendorffii SELMODRAFT_128378 N 0.784
SELMODRAFT_36986 Selaginella moellendorffii SELMODRAFT_36986 N 0.784
SELMODRAFT_36987 Selaginella moellendorffii SELMODRAFT_36987 N 0.784
SELMODRAFT_57106 Selaginella moellendorffii SELMODRAFT_57106 N 0.784
SELMODRAFT_57114 Selaginella moellendorffii SELMODRAFT_57114 N 0.784
Si006616m.g Setaria italica Si006616m.g N 0.766
Si030360m.g Setaria italica Si030360m.g N 0.792
Solyc04g074320.1 Solanum lycopersicum Solyc04g074320.1 N 0.772
Solyc05g009770.1 Solanum lycopersicum Solyc05g009770.1 N 0.774
Solyc11g062060.1 Solanum lycopersicum Solyc11g062060.1 N 0.774
PGSC0003DMG400013609 Solanum tuberosum PGSC0003DMG400013609 N 0.774
PGSC0003DMG400030271 Solanum tuberosum PGSC0003DMG400030271 N 0.774
PGSC0003DMG400030803 Solanum tuberosum PGSC0003DMG400030803 N 0.772
PGSC0003DMG400046144 Solanum tuberosum PGSC0003DMG400046144 N 0.774
Sb02g020840 Sorghum bicolor Sb02g020840 N 0.792
Sb10g024040 Sorghum bicolor Sb10g024040 N 0.766
TCM_011858 Theobroma cacao TCM_011858 N 0.784
TCM_024788 Theobroma cacao TCM_024788 N 0.774
TCM_034881 Theobroma cacao TCM_034881 N 0.758
TCM_040610 Theobroma cacao TCM_040610 N 0.784
Traes_5BL_46BDE583B Triticum aestivum Traes_5BL_46BDE583B N 0.792
Traes_5DL_98FA0887C Triticum aestivum Traes_5DL_98FA0887C N 0.792
Traes_7AL_1070DBD71 Triticum aestivum Traes_7AL_1070DBD71 N 0.790
TRIUR3_23735 Triticum urartu TRIUR3_23735 N 0.790
TRIUR3_30537 Triticum urartu TRIUR3_30537 N 0.792
DOT5 Vitis vinifera VIT_01s0011g03100 N 0.784
VIT_06s0004g01870 Vitis vinifera VIT_06s0004g01870 N 0.756
NTT Vitis vinifera VIT_08s0007g08070 N 0.774
TT1 Vitis vinifera VIT_18s0001g05860 N 0.764
GRMZM2G061545 Zea mays GRMZM2G061545 N 0.790
GRMZM2G150011 Zea mays GRMZM2G150011 N 0.792
GRMZM2G435357 Zea mays GRMZM2G435357 N 0.766
GRMZM2G436344 Zea mays GRMZM2G436344 N 0.766