RBPJ (Ornithorhynchus anatinus)
CSL

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF09271 (LAG1-DNAbind) IPR015351 ENSOANG00000006699 T166093_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RBPJ
M00735_2.00 		Homo sapiens
NNNBTCHCAN
NTGDGAVNNN		 PBM
DelBianco et al.(2010)
GST-CSL_Fig2 		1.000 1.000
RBPJ
M00736_2.00 		Homo sapiens
NNNYTCHCAN
NTGDGARNNN		 PBM
DelBianco et al.(2010)
GST-CSL_Fig4 		1.000 1.000
RBPJ
M00737_2.00 		Homo sapiens
NNNBTCHCAN
NTGDGAVNNN		 PBM
DelBianco et al.(2010)
GST-CSL-NOTCH1 		1.000 1.000
RBPJ
M00738_2.00 		Homo sapiens
NBTCHCAN
NTGDGAVN		 PBM
DelBianco et al.(2010)
GST-NOTCH1_CSL-6His_MAML1 		1.000 1.000
RBPJ
M00739_2.00 		Homo sapiens
NNBTCHCAN
NTGDGAVNN		 PBM
DelBianco et al.(2010)
GST-NOTCH1_CSL-6His 		1.000 1.000
RBPJ
M00740_2.00 		Homo sapiens
NNNYTCYCAN
NTGRGARNNN		 PBM
DelBianco et al.(2010)
GST-NOTCH1_Fig2 		1.000 1.000
RBPJ
M00741_2.00 		Homo sapiens
NNNBTCHCAN
NTGDGAVNNN		 PBM
DelBianco et al.(2010)
MAML1-CSL-GST-NOTCH1_Fig2 		1.000 1.000
RBPJ
M00742_2.00 		Homo sapiens
NDYTCHCAB
VTGDGARHN		 PBM
DelBianco et al.(2010)
MAML1-CSL-GST-NOTCH1_Fig5 		1.000 1.000
RBPJ
M08105_2.00 		Homo sapiens
NNTTCCCABN
NVTGGGAANN		 ChIP-seq
Mathelier et al.(2014)
MA1116.1 		1.000 1.000
RBPJ
M09020_2.00 		Homo sapiens
BTTCCCASVVN
NBBSTGGGAAV		 Misc
Kulakovskiy et al.(2013)
SUH_HUMAN.H11MO.0.A 		1.000 1.000
Rbpj
M09021_2.00 		Mus musculus
NBTTCCCASVV
BBSTGGGAAVN		 Misc
Kulakovskiy et al.(2013)
SUH_MOUSE.H11MO.0.A 		1.000 1.000
RBPJ
M10413_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RBPJK_01 		1.000 1.000
RBPJ
M10414_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RBPJK_Q4 		1.000 1.000
Su(H)
M10415_2.00 		Drosophila melanogaster
VGKTTCYCACRVY
RBYGTGRGAAMCB		 Transfac
Matys et al.(2006)
I$SUH_01 		0.794 0.794
Su(H)
M08455_2.00 		Drosophila melanogaster
HBHNVGKTTCYCACRV
BYGTGRGAAMCBNDVD		 COMPILED
Mathelier et al.(2014)
MA0085.1 		0.794 0.794
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSOANP00000010695 CSL 42 172

Links

Other CSL family TFs
Other Ornithorhynchus anatinus TFs

165 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00003p00264810 Amborella trichopoda AMTR_s00003p00264810 N
Aquca_008_00040 Aquilegia coerulea Aquca_008_00040 N
ULT1 Arabidopsis lyrata fgenesh2_kg.7__1389__AT4G28190.1 N
Bostr.7867s0654 Boechera stricta Bostr.7867s0654 N
Bo1g051270 Brassica oleracea Bo1g051270 N
Bo7g111950 Brassica oleracea Bo7g111950 N
Bra026276 Brassica rapa Bra026276 N
PK16281.1 Cannabis sativa PK16281.1 N
Cagra.1225s0078 Capsella grandiflora Cagra.1225s0078 N
Carubv10005638m.g Capsella rubella Carubv10005638m.g N
evm.TU.supercontig_34.111 Carica papaya evm.TU.supercontig_34.111 N
Ca_19014 Cicer arietinum Ca_19014 N
Cla007849 Citrullus lanatus Cla007849 N
Cucsa.147930 Cucumis sativus Cucsa.147930 N
Eucgr.K00939 Eucalyptus grandis Eucgr.K00939 N
gene10278-v1.0-hybrid Fragaria vesca gene10278-v1.0-hybrid N
GLYMA12G11800 Glycine max GLYMA12G11800 N
GLYMA06G45180 Glycine max GLYMA06G45180 N
Gorai.005G204800 Gossypium raimondii Gorai.005G204800 N
Gorai.008G152400 Gossypium raimondii Gorai.008G152400 N
Lus10018560.g Linum usitatissimum Lus10018560.g N
Lus10039791.g Linum usitatissimum Lus10039791.g N
chr3.CM0711.550.nd Lotus japonicus chr3.CM0711.550.nd N
MDP0000315130 Malus domestica MDP0000315130 N
MDP0000237588 Malus domestica MDP0000237588 N
MDP0000089136 Malus domestica MDP0000089136 N
cassava12533.valid.m1 Manihot esculenta cassava12533.valid.m1 N
cassava18740.valid.m1 Manihot esculenta cassava18740.valid.m1 N
MTR_0072s0040 Medicago truncatula MTR_0072s0040 N
GSMUA_AchrUn_randomG13850_001 Musa acuminata GSMUA_AchrUn_randomG13850_001 N
GSMUA_Achr1G08820_001 Musa acuminata GSMUA_Achr1G08820_001 N
GSMUA_Achr2G02900_001 Musa acuminata GSMUA_Achr2G02900_001 N
POPTR_0013s14170 Populus trichocarpa POPTR_0013s14170 N
POPTR_0019s13550 Populus trichocarpa POPTR_0019s13550 N
Pm015354 Prunus mume Pm015354 N
PRUPE_ppa017439mg Prunus persica PRUPE_ppa017439mg N
29983.m003255 Ricinus communis 29983.m003255 N
SapurV1A.0048s0510 Salix purpurea SapurV1A.0048s0510 N
SapurV1A.0492s0170 Salix purpurea SapurV1A.0492s0170 N
SapurV1A.2807s0020 Salix purpurea SapurV1A.2807s0020 N
Sb03g036430 Sorghum bicolor Sb03g036430 N
TCM_007971 Theobroma cacao TCM_007971 N
GRMZM2G082745 Zea mays GRMZM2G082745 N
GRMZM2G004690 Zea mays GRMZM2G004690 N