Gorai.013G266300 (Gossypium raimondii)
EIN3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04873 (EIN3) IPR006957 Gorai.013G266300 T175364_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q9ZWK1_TOBAC
M10470_2.00 		Nicotiana tabacum
AGRTWCAT
ATGWAYCT		 Transfac
Matys et al.(2006)
P$TEIL_01 		0.931 0.931
EIN3
M00725_2.00 		Arabidopsis thaliana
NNRTDHAYNN
NNRTDHAYNN		 PBM
Chang et al.(2013)
pTH8729 		0.915 0.915
EIN3
M06878_2.00 		Arabidopsis thaliana
GDMYANRTWCAWTGH
DCAWTGWAYNTRKHC		 Dap-seq
OMalley et al.(2016)
EIN3_col_a 		0.915 0.915
EIN3
M06879_2.00 		Arabidopsis thaliana
RCCGTTR
YAACGGY		 Dap-seq
OMalley et al.(2016)
EIN3_colamp_a 		0.915 0.915
EIL1
M00724_2.00 		Arabidopsis thaliana
NNVRTDMRN
NYKHAYBNN		 PBM
Chang et al.(2013)
pTH7932 		0.890 0.890
e_gw1.87.73.1
M00726_2.00 		Physcomitrella patens
NNNRTDCDBN
NVHGHAYNNN		 PBM
Chang et al.(2013)
pTH8479 		0.837 0.837
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.013G266300.1 EIN3 48 295
Gorai.013G266300.2 EIN3 48 295

Links

Other EIN3 family TFs
Other Gossypium raimondii TFs

156 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_28545 Aegilops tauschii F775_28545 I 0.797
AMTR_s00022p00216890 Amborella trichopoda AMTR_s00022p00216890 I 0.710
AMTR_s00119p00117410 Amborella trichopoda AMTR_s00119p00117410 I 0.859
Aquca_014_00938 Aquilegia coerulea Aquca_014_00938 I 0.902
EIN3 Arabidopsis lyrata fgenesh2_kg.3__2304__AT3G20770.1 I 0.906
EIL1 Arabidopsis lyrata fgenesh2_kg.4__646__AT2G27050.1 I 0.891
EIL1 Arabidopsis thaliana AT2G27050 D 0.887
EIN3 Arabidopsis thaliana AT3G20770 D 0.915
Bostr.19424s0573 Boechera stricta Bostr.19424s0573 I 0.911
Bostr.29505s0037 Boechera stricta Bostr.29505s0037 I 0.878
BRADI1G63780 Brachypodium distachyon BRADI1G63780 I 0.809
Bo1g108650 Brassica oleracea Bo1g108650 I 0.857
Bo3g041690 Brassica oleracea Bo3g041690 I 0.867
Bo3g076180 Brassica oleracea Bo3g076180 I 0.841
Bo5g106280 Brassica oleracea Bo5g106280 I 0.899
Bra000528 Brassica rapa Bra000528 I 0.875
Bra001802 Brassica rapa Bra001802 I 0.835
PK01239.1 Cannabis sativa PK01239.1 I 0.894
PK13351.1 Cannabis sativa PK13351.1 I 0.890
PK19114.1 Cannabis sativa PK19114.1 I 0.704
Cagra.2243s0007 Capsella grandiflora Cagra.2243s0007 I 0.911
Cagra.6016s0001 Capsella grandiflora Cagra.6016s0001 I 0.883
Carubv10013213m.g Capsella rubella Carubv10013213m.g I 0.911
Carubv10022879m.g Capsella rubella Carubv10022879m.g I 0.883
evm.TU.supercontig_103.60 Carica papaya evm.TU.supercontig_103.60 I 0.927
evm.TU.supercontig_54.30 Carica papaya evm.TU.supercontig_54.30 I 0.801
Ca_07534 Cicer arietinum Ca_07534 I 0.923
Ca_10236 Cicer arietinum Ca_10236 I 0.927
Ciclev10000608m.g Citrus clementina Ciclev10000608m.g I 0.882
Ciclev10000617m.g Citrus clementina Ciclev10000617m.g I 0.902
Ciclev10014617m.g Citrus clementina Ciclev10014617m.g I 0.927
Ciclev10015261m.g Citrus clementina Ciclev10015261m.g I 0.700
orange1.1g007017m.g Citrus sinensis orange1.1g007017m.g I 0.927
orange1.1g007174m.g Citrus sinensis orange1.1g007174m.g I 0.902
orange1.1g007662m.g Citrus sinensis orange1.1g007662m.g I 0.700
orange1.1g009144m.g Citrus sinensis orange1.1g009144m.g I 0.882
Cucsa.142750 Cucumis sativus Cucsa.142750 I 0.935
Cucsa.364340 Cucumis sativus Cucsa.364340 I 0.890
Eucgr.B03664 Eucalyptus grandis Eucgr.B03664 I 0.700
Eucgr.G02632 Eucalyptus grandis Eucgr.G02632 I 0.878
Eucgr.J00631 Eucalyptus grandis Eucgr.J00631 I 0.939
Thhalv10001938m.g Eutrema salsugineum Thhalv10001938m.g I 0.902
Thhalv10020292m.g Eutrema salsugineum Thhalv10020292m.g I 0.915
gene00379-v1.0-hybrid Fragaria vesca gene00379-v1.0-hybrid I 0.866
gene25474-v1.0-hybrid Fragaria vesca gene25474-v1.0-hybrid I 0.911
GLYMA02G44220 Glycine max GLYMA02G44220 I 0.919
GLYMA13G03660 Glycine max GLYMA13G03660 I 0.923
GLYMA13G03700 Glycine max GLYMA13G03700 I 0.939
GLYMA13G41751 Glycine max GLYMA13G41751 I 0.721
GLYMA14G04550 Glycine max GLYMA14G04550 I 0.931
GLYMA15G03650 Glycine max GLYMA15G03650 I 0.713
GLYMA20G12250 Glycine max GLYMA20G12250 I 0.935
Gorai.003G140600 Gossypium raimondii Gorai.003G140600 I 0.939
Gorai.004G035300 Gossypium raimondii Gorai.004G035300 I 0.745
Gorai.004G227800 Gossypium raimondii Gorai.004G227800 I 0.935
Gorai.009G071400 Gossypium raimondii Gorai.009G071400 I 0.700
Gorai.009G105400 Gossypium raimondii Gorai.009G105400 I 0.947
MLOC_14619 Hordeum vulgare MLOC_14619 I 0.797
LPERR03G13760 Leersia perrieri LPERR03G13760 I 0.825
LPERR07G23570 Leersia perrieri LPERR07G23570 I 0.728
chr2.CM0031.190.nc Lotus japonicus chr2.CM0031.190.nc I 0.931
chr3.LjB09K03.50.nc Lotus japonicus chr3.LjB09K03.50.nc I 0.700
LjSGA_067101.1 Lotus japonicus LjSGA_067101.1 I 0.932
MDP0000202831 Malus domestica MDP0000202831 I 0.890
MDP0000212881 Malus domestica MDP0000212881 I 0.882
MDP0000306498 Malus domestica MDP0000306498 I 0.882
MDP0000564884 Malus domestica MDP0000564884 I 0.882
cassava3620.m1 Manihot esculenta cassava3620.m1 I 0.939
MTR_2g098470 Medicago truncatula MTR_2g098470 I 0.711
MTR_3g078770 Medicago truncatula MTR_3g078770 I 0.915
MTR_5g087790 Medicago truncatula MTR_5g087790 I 0.931
mgf012394m Mimulus guttatus mgf012394m I 0.821
mgf015996m Mimulus guttatus mgf015996m I 0.876
mgf018950m Mimulus guttatus mgf018950m I 0.865
GSMUA_Achr10G12800_001 Musa acuminata GSMUA_Achr10G12800_001 I 0.833
GSMUA_Achr11G25120_001 Musa acuminata GSMUA_Achr11G25120_001 I 0.753
GSMUA_Achr2G11540_001 Musa acuminata GSMUA_Achr2G11540_001 I 0.802
GSMUA_Achr3G09440_001 Musa acuminata GSMUA_Achr3G09440_001 I 0.751
GSMUA_Achr5G27670_001 Musa acuminata GSMUA_Achr5G27670_001 I 0.837
GSMUA_Achr6G15930_001 Musa acuminata GSMUA_Achr6G15930_001 I 0.831
GSMUA_Achr8G21550_001 Musa acuminata GSMUA_Achr8G21550_001 I 0.815
GSMUA_Achr9G17080_001 Musa acuminata GSMUA_Achr9G17080_001 I 0.785
Q9ZWK1_TOBAC Nicotiana tabacum Q9ZWK1_TOBAC D 0.927
OBART07G26760 Oryza barthii OBART07G26760 I 0.770
ORGLA03G0150600 Oryza glaberrima ORGLA03G0150600 I 0.805
ORGLA07G0211700 Oryza glaberrima ORGLA07G0211700 I 0.776
OGLUM03G15860 Oryza glumaepatula OGLUM03G15860 I 0.805
BGIOSGA012535 Oryza indica BGIOSGA012535 I 0.805
BGIOSGA023694 Oryza indica BGIOSGA023694 I 0.776
OLONG_004360 Oryza longistaminata OLONG_004360 I 0.733
OMERI03G14140 Oryza meridionalis OMERI03G14140 I 0.805
OMERI05G02190 Oryza meridionalis OMERI05G02190 I 0.727
OMERI07G23380 Oryza meridionalis OMERI07G23380 I 0.765
ONIVA03G16680 Oryza nivara ONIVA03G16680 I 0.805
ONIVA07G26490 Oryza nivara ONIVA07G26490 I 0.776
OPUNC03G15240 Oryza punctata OPUNC03G15240 I 0.805
OPUNC07G25150 Oryza punctata OPUNC07G25150 I 0.765
ORUFI03G16290 Oryza rufipogon ORUFI03G16290 I 0.805
ORUFI07G27710 Oryza rufipogon ORUFI07G27710 I 0.776
OS03G0324200 Oryza sativa OS03G0324200 I 0.805
OS03G0324300 Oryza sativa OS03G0324300 I 0.805
OS07G0685700 Oryza sativa OS07G0685700 I 0.776
Pavir.Bb03705 Panicum virgatum Pavir.Bb03705 I 0.717
Pavir.Ia03450 Panicum virgatum Pavir.Ia03450 I 0.797
Pavir.Ib01512 Panicum virgatum Pavir.Ib01512 I 0.805
Pavir.J01001 Panicum virgatum Pavir.J01001 I 0.736
PDK_20s1443543g001 Phoenix dactylifera PDK_20s1443543g001 I 0.798
e_gw1.11.194.1 Physcomitrella patens e_gw1.11.194.1 I 0.829
e_gw1.87.73.1 Physcomitrella patens e_gw1.87.73.1 D 0.837
POPTR_0001s05360 Populus trichocarpa POPTR_0001s05360 I 0.704
POPTR_0004s20830 Populus trichocarpa POPTR_0004s20830 I 0.927
POPTR_0008s01200 Populus trichocarpa POPTR_0008s01200 I 0.890
POPTR_0009s16080 Populus trichocarpa POPTR_0009s16080 I 0.915
POPTR_0010s25370 Populus trichocarpa POPTR_0010s25370 I 0.882
Pm017009 Prunus mume Pm017009 I 0.902
PRUPE_ppa003113mg Prunus persica PRUPE_ppa003113mg I 0.703
PRUPE_ppa003493mg Prunus persica PRUPE_ppa003493mg I 0.852
PRUPE_ppa003550mg Prunus persica PRUPE_ppa003550mg I 0.874
29708.m000185 Ricinus communis 29708.m000185 I 0.935
30169.m006395 Ricinus communis 30169.m006395 I 0.707
SapurV1A.0036s0870 Salix purpurea SapurV1A.0036s0870 I 0.870
SapurV1A.0070s0670 Salix purpurea SapurV1A.0070s0670 I 0.878
SapurV1A.0561s0140 Salix purpurea SapurV1A.0561s0140 I 0.906
SapurV1A.0615s0150 Salix purpurea SapurV1A.0615s0150 I 0.927
SELMODRAFT_112063 Selaginella moellendorffii SELMODRAFT_112063 I 0.797
SELMODRAFT_136229 Selaginella moellendorffii SELMODRAFT_136229 I 0.797
SELMODRAFT_16064 Selaginella moellendorffii SELMODRAFT_16064 I 0.711
SELMODRAFT_16065 Selaginella moellendorffii SELMODRAFT_16065 I 0.711
SELMODRAFT_419770 Selaginella moellendorffii SELMODRAFT_419770 I 0.810
SELMODRAFT_449238 Selaginella moellendorffii SELMODRAFT_449238 I 0.787
Si029213m.g Setaria italica Si029213m.g I 0.733
Si034616m.g Setaria italica Si034616m.g I 0.789
Solyc01g009170.2 Solanum lycopersicum Solyc01g009170.2 I 0.931
Solyc01g096810.2 Solanum lycopersicum Solyc01g096810.2 I 0.866
Solyc06g073720.1 Solanum lycopersicum Solyc06g073720.1 I 0.911
Solyc06g073730.1 Solanum lycopersicum Solyc06g073730.1 I 0.902
PGSC0003DMG400005914 Solanum tuberosum PGSC0003DMG400005914 I 0.894
PGSC0003DMG400005915 Solanum tuberosum PGSC0003DMG400005915 I 0.906
PGSC0003DMG400008712 Solanum tuberosum PGSC0003DMG400008712 I 0.931
PGSC0003DMG400027507 Solanum tuberosum PGSC0003DMG400027507 I 0.866
PGSC0003DMG400029908 Solanum tuberosum PGSC0003DMG400029908 I 0.700
Sb01g036740 Sorghum bicolor Sb01g036740 I 0.797
Sb02g043350 Sorghum bicolor Sb02g043350 I 0.720
TCM_042022 Theobroma cacao TCM_042022 I 0.943
Traes_2BS_647C82888 Triticum aestivum Traes_2BS_647C82888 I 0.713
Traes_4AS_2BDA1260C Triticum aestivum Traes_4AS_2BDA1260C I 0.797
Traes_4BL_F34EBD618 Triticum aestivum Traes_4BL_F34EBD618 I 0.847
Traes_4DL_C083C804E Triticum aestivum Traes_4DL_C083C804E I 0.793
Traes_5DL_62DEF8361 Triticum aestivum Traes_5DL_62DEF8361 I 0.709
VIT_06s0009g01380 Vitis vinifera VIT_06s0009g01380 I 0.870
VIT_13s0047g00250 Vitis vinifera VIT_13s0047g00250 I 0.902
GRMZM2G003558 Zea mays GRMZM2G003558 I 0.732
GRMZM2G033570 Zea mays GRMZM2G033570 I 0.793
GRMZM2G151811 Zea mays GRMZM2G151811 I 0.745
GRMZM2G317584 Zea mays GRMZM2G317584 I 0.789