CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PEQ_0000587201
(
Parascaris equorum
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
PEQ_0000587201
T235680_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PEQ_0000587201-mRNA-1
Homeodomain
31
58
RSKQPYRLHNDNAFLQVWFSNRRAKWRR
Links
Other
Homeodomain
family TFs
Other
Parascaris equorum
TFs
21 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
nAv.1.0.1.g08227
Acanthocheilonema viteae
nAv.1.0.1.g08227
N
0.000
AMAG_00757
Allomyces macrogynus
AMAG_00757
N
0.000
AMAG_02260
Allomyces macrogynus
AMAG_02260
N
0.000
AMTR_s00029p00240750
Amborella trichopoda
AMTR_s00029p00240750
I
0.000
AMTR_s00044p00160130
Amborella trichopoda
AMTR_s00044p00160130
I
0.000
ANCCEY_04224
Ancylostoma ceylanicum
ANCCEY_04224
N
0.000
ANCDUO_12352
Ancylostoma duodenale
ANCDUO_12352
N
0.000
ACAC_0000817201
Angiostrongylus cantonensis
ACAC_0000817201
N
0.000
ACOC_0000235301
Angiostrongylus costaricensis
ACOC_0000235301
N
0.000
ASIM_0001178701
Anisakis simplex
ASIM_0001178701
N
0.000
GB47837
Apis mellifera
GB47837
N
0.000
Aquca_004_00335
Aquilegia coerulea
Aquca_004_00335
I
0.000
Aquca_015_00344
Aquilegia coerulea
Aquca_015_00344
I
0.000
Aquca_045_00054
Aquilegia coerulea
Aquca_045_00054
I
0.000
HMGB1
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_5001281
I
0.000
HMGB2
Arabidopsis lyrata
fgenesh2_kg.1__2255__AT1G20693.2
I
0.000
HMGB3
Arabidopsis lyrata
fgenesh2_kg.1__2258__AT1G20696.3
I
0.000
HMGB4
Arabidopsis lyrata
fgenesh2_kg.3__3350__AT2G17560.1
I
0.000
HMGB2
Arabidopsis thaliana
AT1G20693
I
0.000
HMGB3
Arabidopsis thaliana
AT1G20696
I
0.000
SSRP1
Arabidopsis thaliana
AT3G28730
I
0.000
HMGB1
Arabidopsis thaliana
AT3G51880
I
0.000
ALUE_0000365901
Ascaris lumbricoides
ALUE_0000365901
N
0.000
ASU_05994
Ascaris suum
ASU_05994
N
0.000
ASU_09087
Ascaris suum
ASU_09087
N
0.000
ACEP16621
Atta cephalotes
ACEP16621
N
0.000
Bostr.0556s0524
Boechera stricta
Bostr.0556s0524
I
0.000
Bostr.18351s0219
Boechera stricta
Bostr.18351s0219
I
0.000
Bostr.6864s0060
Boechera stricta
Bostr.6864s0060
I
0.000
Bostr.7128s0662
Boechera stricta
Bostr.7128s0662
I
0.000
Bostr.7128s0663
Boechera stricta
Bostr.7128s0663
I
0.000
BRADI3G51140
Brachypodium distachyon
BRADI3G51140
N
0.000
BRADI4G37247
Brachypodium distachyon
BRADI4G37247
I
0.000
Bo5g030580
Brassica oleracea
Bo5g030580
I
0.000
Bo7g061420
Brassica oleracea
Bo7g061420
I
0.000
Bo7g101270
Brassica oleracea
Bo7g101270
I
0.000
Bo8g070350
Brassica oleracea
Bo8g070350
I
0.000
Bo8g081200
Brassica oleracea
Bo8g081200
I
0.000
Bra002073
Brassica rapa
Bra002073
I
0.000
Bra025350
Brassica rapa
Bra025350
N
0.000
Bra025838
Brassica rapa
Bra025838
I
0.000
Bra037266
Brassica rapa
Bra037266
I
0.000
Bm8632
Brugia malayi
Bm8632
N
0.000
BTMF_0001080901
Brugia timori
BTMF_0001080901
N
0.000
BXY_1081800
Bursaphelenchus xylophilus
BXY_1081800
I
0.000
BXY_1081900
Bursaphelenchus xylophilus
BXY_1081900
I
0.000
CBN25379
Caenorhabditis brenneri
CBN25379
I
0.000
hmg-1.1
Caenorhabditis elegans
WBGene00001971
N
0.000
CJA04355
Caenorhabditis japonica
CJA04355
N
0.000
CRE11852
Caenorhabditis remanei
CRE11852
N
0.000
Cflo_05893--XP_624266.1_APIME
Camponotus floridanus
Cflo_05893--XP_624266.1_APIME
N
0.000
Cagra.0535s0005
Capsella grandiflora
Cagra.0535s0005
I
0.000
Cagra.1043s0022
Capsella grandiflora
Cagra.1043s0022
I
0.000
Cagra.1891s0017
Capsella grandiflora
Cagra.1891s0017
I
0.000
Cagra.6160s0027
Capsella grandiflora
Cagra.6160s0027
I
0.000
Cagra.6160s0028
Capsella grandiflora
Cagra.6160s0028
I
0.000
Carubv10010586m.g
Capsella rubella
Carubv10010586m.g
I
0.000
Carubv10012681m.g
Capsella rubella
Carubv10012681m.g
I
0.000
Carubv10014808m.g
Capsella rubella
Carubv10014808m.g
I
0.000
Carubv10016819m.g
Capsella rubella
Carubv10016819m.g
I
0.000
Carubv10018109m.g
Capsella rubella
Carubv10018109m.g
I
0.000
evm.TU.supercontig_211.6
Carica papaya
evm.TU.supercontig_211.6
I
0.000
evm.TU.supercontig_26.174
Carica papaya
evm.TU.supercontig_26.174
I
0.000
Ca_09896
Cicer arietinum
Ca_09896
I
0.000
Cla009093
Citrullus lanatus
Cla009093
I
0.000
Cla009222
Citrullus lanatus
Cla009222
I
0.000
Cla018386
Citrullus lanatus
Cla018386
I
0.000
Ciclev10002782m.g
Citrus clementina
Ciclev10002782m.g
I
0.000
Ciclev10016587m.g
Citrus clementina
Ciclev10016587m.g
N
0.000
Ciclev10026715m.g
Citrus clementina
Ciclev10026715m.g
I
0.000
Ciclev10032930m.g
Citrus clementina
Ciclev10032930m.g
I
0.000
orange1.1g026850m.g
Citrus sinensis
orange1.1g026850m.g
N
0.000
orange1.1g029982m.g
Citrus sinensis
orange1.1g029982m.g
I
0.000
orange1.1g031906m.g
Citrus sinensis
orange1.1g031906m.g
I
0.000
orange1.1g031973m.g
Citrus sinensis
orange1.1g031973m.g
I
0.000
Cucsa.067200
Cucumis sativus
Cucsa.067200
I
0.000
Cucsa.300030
Cucumis sativus
Cucsa.300030
I
0.000
Cucsa.323100
Cucumis sativus
Cucsa.323100
I
0.000
DICVIV_05502
Dictyocaulus viviparus
DICVIV_05502
N
0.000
nDi.2.2.2.g08508
Dirofilaria immitis
nDi.2.2.2.g08508
N
0.000
DME_0000779601
Dracunculus medinensis
DME_0000779601
N
0.000
GF12460
Drosophila ananassae
FBgn0089497
N
0.000
GG19998
Drosophila erecta
FBgn0112197
N
0.000
GH21151
Drosophila grimshawi
FBgn0128613
N
0.000
Ssrp
Drosophila melanogaster
FBgn0010278
N
0.000
GI18750
Drosophila mojavensis
FBgn0141489
N
0.000
GL11071
Drosophila persimilis
FBgn0148681
N
0.000
Ssrp
Drosophila pseudoobscura
FBgn0078456
N
0.000
GD25013
Drosophila simulans
FBgn0196325
N
0.000
GJ21774
Drosophila virilis
FBgn0208892
N
0.000
GK22092
Drosophila willistoni
FBgn0224077
N
0.000
GE11532
Drosophila yakuba
FBgn0229332
N
0.000
ECPE_0000536801
Echinostoma caproni
ECPE_0000536801
N
0.000
ETH_00027140
Eimeria tenella
ETH_00027140
I
0.000
ETH_00031100
Eimeria tenella
ETH_00031100
I
0.000
Eucgr.F03571
Eucalyptus grandis
Eucgr.F03571
I
0.000
Eucgr.J02535
Eucalyptus grandis
Eucgr.J02535
I
0.000
Thhalv10003803m.g
Eutrema salsugineum
Thhalv10003803m.g
I
0.000
Thhalv10009371m.g
Eutrema salsugineum
Thhalv10009371m.g
I
0.000
Thhalv10009970m.g
Eutrema salsugineum
Thhalv10009970m.g
I
0.000
Thhalv10010751m.g
Eutrema salsugineum
Thhalv10010751m.g
I
0.000
Thhalv10022905m.g
Eutrema salsugineum
Thhalv10022905m.g
I
0.000
D915_02473
Fasciola hepatica
D915_02473
N
0.000
gene13043-v1.0-hybrid
Fragaria vesca
gene13043-v1.0-hybrid
I
0.000
GLYMA04G01840
Glycine max
GLYMA04G01840
I
0.000
GLYMA06G01970
Glycine max
GLYMA06G01970
I
0.000
Gorai.002G115100
Gossypium raimondii
Gorai.002G115100
I
0.000
Gorai.005G114500
Gossypium raimondii
Gorai.005G114500
I
0.000
Gorai.008G147700
Gossypium raimondii
Gorai.008G147700
I
0.000
Gorai.009G186800
Gossypium raimondii
Gorai.009G186800
I
0.000
HCOI01550200
Haemonchus contortus
HCOI01550200
N
0.000
HCOI01913300
Haemonchus contortus
HCOI01913300
I
0.000
HPLM_0001324601
Haemonchus placei
HPLM_0001324601
N
0.000
Hsal_13112--XP_624266.1_APIME
Harpegnathos saltator
Hsal_13112--XP_624266.1_APIME
N
0.000
LPERR08G00140
Leersia perrieri
LPERR08G00140
N
0.000
LDEC020995
Leptinotarsa decemlineata
LDEC020995
N
0.000
Lus10012252.g
Linum usitatissimum
Lus10012252.g
I
0.000
Lus10016025.g
Linum usitatissimum
Lus10016025.g
I
0.000
nLs.2.1.2.g04082
Litomosoides sigmodontis
nLs.2.1.2.g04082
N
0.000
LOAG_08062
Loa loa
LOAG_08062
N
0.000
chr1.CM0113.560.nc
Lotus japonicus
chr1.CM0113.560.nc
I
0.000
ENSMMUG00000031258
Macaca mulatta
ENSMMUG00000031258
I
0.000
MDP0000205665
Malus domestica
MDP0000205665
I
0.000
MDP0000275042
Malus domestica
MDP0000275042
I
0.000
MDP0000310093
Malus domestica
MDP0000310093
I
0.000
MDP0000362980
Malus domestica
MDP0000362980
I
0.000
MDP0000607529
Malus domestica
MDP0000607529
I
0.000
MDP0000757111
Malus domestica
MDP0000757111
I
0.000
cassava18624.valid.m1
Manihot esculenta
cassava18624.valid.m1
I
0.000
cassava18625.valid.m1
Manihot esculenta
cassava18625.valid.m1
I
0.000
cassava18626.valid.m1
Manihot esculenta
cassava18626.valid.m1
I
0.000
cassava23716.valid.m1
Manihot esculenta
cassava23716.valid.m1
I
0.000
cassava24859.valid.m1
Manihot esculenta
cassava24859.valid.m1
I
0.000
cassava35948.valid.m1
Manihot esculenta
cassava35948.valid.m1
I
0.000
MTR_3g115580
Medicago truncatula
MTR_3g115580
I
0.000
MTR_5g024180
Medicago truncatula
MTR_5g024180
I
0.000
MTR_5g082570
Medicago truncatula
MTR_5g082570
I
0.000
MTR_7g068280
Medicago truncatula
MTR_7g068280
I
0.000
MTR_8g073345
Medicago truncatula
MTR_8g073345
I
0.000
mgf000913m
Mimulus guttatus
mgf000913m
I
0.000
mgf006113m
Mimulus guttatus
mgf006113m
I
0.000
mgf008076m
Mimulus guttatus
mgf008076m
I
0.000
mgf009330m
Mimulus guttatus
mgf009330m
I
0.000
mgf014518m
Mimulus guttatus
mgf014518m
I
0.000
mgf016608m
Mimulus guttatus
mgf016608m
I
0.000
mgf024995m
Mimulus guttatus
mgf024995m
I
0.000
GSMUA_Achr2G11060_001
Musa acuminata
GSMUA_Achr2G11060_001
I
0.000
GSMUA_Achr4G25860_001
Musa acuminata
GSMUA_Achr4G25860_001
I
0.000
GSMUA_Achr5G11630_001
Musa acuminata
GSMUA_Achr5G11630_001
I
0.000
MDOA007633
Musca domestica
MDOA007633
N
0.000
NECAME_17555
Necator americanus
NECAME_17555
N
0.000
NECAME_17981
Necator americanus
NECAME_17981
N
0.000
NCLIV_043670
Neospora caninum
NCLIV_043670
I
0.000
NBR_0001277401
Nippostrongylus brasiliensis
NBR_0001277401
N
0.000
OESDEN_09619
Oesophagostomum dentatum
OESDEN_09619
N
0.000
OESDEN_24828
Oesophagostomum dentatum
OESDEN_24828
N
0.000
SNAPOd2T00000181001
Oikopleura dioica
SNAPOd2T00000181001
N
0.000
SNAPOd2T00016002001
Oikopleura dioica
SNAPOd2T00016002001
N
0.000
OFLC_0000261801
Onchocerca flexuosa
OFLC_0000261801
N
0.000
nOo.2.0.1.g04208
Onchocerca ochengi
nOo.2.0.1.g04208
N
0.000
nOo.2.0.1.g04693
Onchocerca ochengi
nOo.2.0.1.g04693
N
0.000
WBGene00238628
Onchocerca volvulus
WBGene00238628
N
0.000
OBART02G27340
Oryza barthii
OBART02G27340
N
0.000
OBART08G00070
Oryza barthii
OBART08G00070
I
0.000
OB02G34710
Oryza brachyantha
OB02G34710
N
0.000
OB08G10120
Oryza brachyantha
OB08G10120
N
0.000
OGLUM02G27900
Oryza glumaepatula
OGLUM02G27900
N
0.000
OGLUM08G00090
Oryza glumaepatula
OGLUM08G00090
I
0.000
BGIOSGA008782
Oryza indica
BGIOSGA008782
N
0.000
BGIOSGA027814
Oryza indica
BGIOSGA027814
I
0.000
BGIOSGA027819
Oryza indica
BGIOSGA027819
I
0.000
OLONG_014445
Oryza longistaminata
OLONG_014445
I
0.000
OMERI02G26620
Oryza meridionalis
OMERI02G26620
N
0.000
ONIVA02G29880
Oryza nivara
ONIVA02G29880
N
0.000
ONIVA08G00070
Oryza nivara
ONIVA08G00070
I
0.000
OPUNC02G25020
Oryza punctata
OPUNC02G25020
N
0.000
OPUNC08G00150
Oryza punctata
OPUNC08G00150
I
0.000
ORUFI02G28820
Oryza rufipogon
ORUFI02G28820
N
0.000
ORUFI08G00080
Oryza rufipogon
ORUFI08G00080
I
0.000
OS02G0670400
Oryza sativa
OS02G0670400
N
0.000
OS08G0101100
Oryza sativa
OS08G0101100
I
0.000
OSTLU_18991
Ostreococcus lucimarinus
OSTLU_18991
N
0.000
OSTLU_31946
Ostreococcus lucimarinus
OSTLU_31946
I
0.000
gw1.6.1665.1
Ostreococcus RCC809
gw1.6.1665.1
I
0.000
ENSOGAG00000026034
Otolemur garnettii
ENSOGAG00000026034
I
0.000
ENSOGAG00000031524
Otolemur garnettii
ENSOGAG00000031524
I
0.000
PTRK_0001161700
Parastrongyloides trichosuri
PTRK_0001161700
N
0.000
PTRK_0001490800
Parastrongyloides trichosuri
PTRK_0001490800
N
0.000
PPAI002521
Phlebotomus papatasi
PPAI002521
N
0.000
PDK_20s1306741g001
Phoenix dactylifera
PDK_20s1306741g001
I
0.000
estExt_fgenesh1_pg.C_2230007
Physcomitrella patens
estExt_fgenesh1_pg.C_2230007
I
0.000
fgenesh1_pg.scaffold_277000017
Physcomitrella patens
fgenesh1_pg.scaffold_277000017
I
0.000
HMG-1
Pisum sativum
Q41026_PEA
D
0.000
POPTR_0002s01000
Populus trichocarpa
POPTR_0002s01000
I
0.000
POPTR_0005s10440
Populus trichocarpa
POPTR_0005s10440
I
0.000
XM_002306945.1
Populus trichocarpa
POPTR_0005s27390
I
0.000
POPTR_0008s06730
Populus trichocarpa
POPTR_0008s06730
I
0.000
POPTR_0010s19720
Populus trichocarpa
POPTR_0010s19720
I
0.000
scaffold113-EXSNAP2012.49
Pristionchus exspectatus
scaffold113-EXSNAP2012.49
N
0.000
scaffold1425-EXSNAP2012.3
Pristionchus exspectatus
scaffold1425-EXSNAP2012.3
N
0.000
Ppa-hmg-1.1
Pristionchus pacificus
PPA22767
N
0.000
Pm006054
Prunus mume
Pm006054
I
0.000
Pm018913
Prunus mume
Pm018913
I
0.000
Pm026798
Prunus mume
Pm026798
I
0.000
PRUPE_ppa011596mg
Prunus persica
PRUPE_ppa011596mg
I
0.000
PRUPE_ppa012424mg
Prunus persica
PRUPE_ppa012424mg
I
0.000
PRUPE_ppa012972mg
Prunus persica
PRUPE_ppa012972mg
I
0.000
PRUPE_ppa026912mg
Prunus persica
PRUPE_ppa026912mg
I
0.000
AABR07009373.1
Rattus norvegicus
ENSRNOG00000011429
I
0.000
RSKR_0000587700
Rhabditophanes kr3021
RSKR_0000587700
N
0.000
29600.m000548
Ricinus communis
29600.m000548
I
0.000
29669.m000844
Ricinus communis
29669.m000844
I
0.000
30170.m014386
Ricinus communis
30170.m014386
I
0.000
SapurV1A.0016s0600
Salix purpurea
SapurV1A.0016s0600
I
0.000
SapurV1A.0085s0030
Salix purpurea
SapurV1A.0085s0030
I
0.000
SapurV1A.0266s0310
Salix purpurea
SapurV1A.0266s0310
I
0.000
SapurV1A.0766s0120
Salix purpurea
SapurV1A.0766s0120
I
0.000
SapurV1A.0825s0160
Salix purpurea
SapurV1A.0825s0160
I
0.000
SELMODRAFT_18312
Selaginella moellendorffii
SELMODRAFT_18312
I
0.000
SELMODRAFT_18313
Selaginella moellendorffii
SELMODRAFT_18313
I
0.000
Solyc02g082700.2
Solanum lycopersicum
Solyc02g082700.2
I
0.000
Solyc04g008820.2
Solanum lycopersicum
Solyc04g008820.2
I
0.000
PGSC0003DMG400001567
Solanum tuberosum
PGSC0003DMG400001567
I
0.000
PGSC0003DMG400018685
Solanum tuberosum
PGSC0003DMG400018685
I
0.000
PGSC0003DMG400025304
Solanum tuberosum
PGSC0003DMG400025304
I
0.000
SINV22588
Solenopsis invicta
SINV22588
N
0.000
L596_g16476
Steinernema carpocapsae
L596_g16476
N
0.000
L596_g28088
Steinernema carpocapsae
L596_g28088
N
0.000
L889_g16198
Steinernema feltiae
L889_g16198
N
0.000
L889_g9094
Steinernema feltiae
L889_g9094
N
0.000
L893_g23503
Steinernema glaseri
L893_g23503
N
0.000
L893_g29974
Steinernema glaseri
L893_g29974
N
0.000
L898_g4830
Steinernema monticolum
L898_g4830
N
0.000
L898_g7743
Steinernema monticolum
L898_g7743
N
0.000
L892_g19058
Steinernema scapterisci
L892_g19058
N
0.000
L892_g23618
Steinernema scapterisci
L892_g23618
N
0.000
SPAL_0000986100
Strongyloides papillosus
SPAL_0000986100
N
0.000
SPAL_0001085700
Strongyloides papillosus
SPAL_0001085700
N
0.000
SSTP_0000585600
Strongyloides stercoralis
SSTP_0000585600
N
0.000
SSTP_0001024100
Strongyloides stercoralis
SSTP_0001024100
N
0.000
SVE_0294800
Strongyloides venezuelensis
SVE_0294800
N
0.000
SVE_0954900
Strongyloides venezuelensis
SVE_0954900
N
0.000
TSTA_074230
Talaromyces stipitatus
TSTA_074230
N
0.000
TELCIR_02603
Teladorsagia circumcincta
TELCIR_02603
N
0.000
tetur02g08250
Tetranychus urticae
tetur02g08250
N
0.000
TCM_000068
Theobroma cacao
TCM_000068
I
0.000
TCM_007659
Theobroma cacao
TCM_007659
I
0.000
TCM_034406
Theobroma cacao
TCM_034406
I
0.000
TCNE_0000332201
Toxocara canis
TCNE_0000332201
N
0.000
TCNE_0001025901
Toxocara canis
TCNE_0001025901
N
0.000
TGME49_010410
Toxoplasma gondii
TGME49_010410
I
0.000
Traes_5BL_9CC98DD38
Triticum aestivum
Traes_5BL_9CC98DD38
I
0.000
Traes_5DL_DD9491112
Triticum aestivum
Traes_5DL_DD9491112
I
0.000
VIT_04s0044g00110
Vitis vinifera
VIT_04s0044g00110
I
0.000
HMGB6
Vitis vinifera
VIT_10s0071g00870
I
0.000
VIT_13s0067g00640
Vitis vinifera
VIT_13s0067g00640
I
0.000
VIT_18s0122g01190
Vitis vinifera
VIT_18s0122g01190
I
0.000
WUBG_16399
Wuchereria bancrofti
WUBG_16399
N
0.000