A1O9_04901 (Exophiala aquamarina)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 A1O9_04901 T252743_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SMP1
M01557_2.00 		Saccharomyces cerevisiae
TTAATAAA
TTTATTAA		 PBM
Zhu et al.(2009)
Smp1 		0.729 0.729
SMP1
M08587_2.00 		Saccharomyces cerevisiae
BNDBMYWYAATTRWRNNWVNN
NNBWNNYWYAATTRWRKVHNV		 Misc
DeBoer et al.(2011)
YBR182C_864 		0.729 0.729
RLM1
M08590_2.00 		Saccharomyces cerevisiae
NTAWWWWTAG
CTAWWWWTAN		 Misc
DeBoer et al.(2011)
YPL089C_419 		0.729 0.729
RLM1
M08459_2.00 		Saccharomyces cerevisiae
NDWTCTAWWWATAGMYHN
NDRKCTATWWWTAGAWHN		 COMPILED
Mathelier et al.(2014)
MA0369.1 		0.729 0.729
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
KEF60051 MADS box 10 57

Links

Other MADS box family TFs
Other Exophiala aquamarina TFs

240 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_32978 Aegilops tauschii F775_32978 I 0.000
Aquca_030_00152 Aquilegia coerulea Aquca_030_00152 I 0.000
ARF17 Arabidopsis lyrata scaffold_202748.1 N 0.000
ARF17 Arabidopsis thaliana AT1G77850 N 0.000
Bostr.20129s0222 Boechera stricta Bostr.20129s0222 N 0.000
BRADI1G33160 Brachypodium distachyon BRADI1G33160 I 0.000
BRADI3G28950 Brachypodium distachyon BRADI3G28950 I 0.000
Bo6g081980 Brassica oleracea Bo6g081980 N 0.000
Bo6g121520 Brassica oleracea Bo6g121520 N 0.000
Bra003665 Brassica rapa Bra003665 N 0.000
Bra015651 Brassica rapa Bra015651 N 0.000
Cagra.0096s0050 Capsella grandiflora Cagra.0096s0050 N 0.000
Carubv10019991m.g Capsella rubella Carubv10019991m.g N 0.000
evm.TU.supercontig_49.122 Carica papaya evm.TU.supercontig_49.122 I 0.000
Ca_26121 Cicer arietinum Ca_26121 I 0.000
Cla008883 Citrullus lanatus Cla008883 I 0.000
Cla022413 Citrullus lanatus Cla022413 I 0.000
Ciclev10000693m.g Citrus clementina Ciclev10000693m.g I 0.000
orange1.1g008078m.g Citrus sinensis orange1.1g008078m.g I 0.000
Cucsa.381330 Cucumis sativus Cucsa.381330 I 0.000
Cucsa.386060 Cucumis sativus Cucsa.386060 I 0.000
Eucgr.F04380 Eucalyptus grandis Eucgr.F04380 I 0.000
Thhalv10018331m.g Eutrema salsugineum Thhalv10018331m.g N 0.000
gene02234-v1.0-hybrid Fragaria vesca gene02234-v1.0-hybrid I 0.000
gene16050-v1.0-hybrid Fragaria vesca gene16050-v1.0-hybrid N 0.000
GLYMA04G43350 Glycine max GLYMA04G43350 N 0.000
Gorai.006G166400 Gossypium raimondii Gorai.006G166400 I 0.000
Gorai.009G107800 Gossypium raimondii Gorai.009G107800 I 0.000
Gorai.009G241900 Gossypium raimondii Gorai.009G241900 I 0.000
Gorai.010G046000 Gossypium raimondii Gorai.010G046000 I 0.000
Gorai.013G267100 Gossypium raimondii Gorai.013G267100 I 0.000
MLOC_64795 Hordeum vulgare MLOC_64795 I 0.000
LPERR02G20290 Leersia perrieri LPERR02G20290 I 0.000
LPERR06G21020 Leersia perrieri LPERR06G21020 I 0.000
LPERR10G09970 Leersia perrieri LPERR10G09970 I 0.000
Lus10009770.g Linum usitatissimum Lus10009770.g N 0.000
Lus10021467.g Linum usitatissimum Lus10021467.g I 0.000
Lus10024754.g Linum usitatissimum Lus10024754.g N 0.000
chr1.LjT31L11.90.nd Lotus japonicus chr1.LjT31L11.90.nd I 0.000
MDP0000232116 Malus domestica MDP0000232116 N 0.000
MDP0000256621 Malus domestica MDP0000256621 I 0.000
cassava36161.valid.m1 Manihot esculenta cassava36161.valid.m1 I 0.000
cassava5984.valid.m1 Manihot esculenta cassava5984.valid.m1 I 0.000
MTR_2g094570 Medicago truncatula MTR_2g094570 I 0.000
MTR_3g073420 Medicago truncatula MTR_3g073420 N 0.000
MTR_4g058930 Medicago truncatula MTR_4g058930 I 0.000
GSMUA_Achr11G22870_001 Musa acuminata GSMUA_Achr11G22870_001 I 0.000
GSMUA_Achr9G29480_001 Musa acuminata GSMUA_Achr9G29480_001 I 0.000
OBART04G30660 Oryza barthii OBART04G30660 N 0.000
OBART06G25230 Oryza barthii OBART06G25230 I 0.000
OBART10G13410 Oryza barthii OBART10G13410 I 0.000
OB02G32150 Oryza brachyantha OB02G32150 I 0.000
OB06G32920 Oryza brachyantha OB06G32920 I 0.000
OB10G20590 Oryza brachyantha OB10G20590 I 0.000
ORGLA02G0215100 Oryza glaberrima ORGLA02G0215100 I 0.000
ORGLA04G0270000 Oryza glaberrima ORGLA04G0270000 N 0.000
ORGLA06G0209500 Oryza glaberrima ORGLA06G0209500 I 0.000
ORGLA10G0115500 Oryza glaberrima ORGLA10G0115500 I 0.000
OGLUM02G25270 Oryza glumaepatula OGLUM02G25270 I 0.000
OGLUM04G30530 Oryza glumaepatula OGLUM04G30530 N 0.000
OGLUM06G26560 Oryza glumaepatula OGLUM06G26560 I 0.000
OGLUM10G13220 Oryza glumaepatula OGLUM10G13220 I 0.000
BGIOSGA008657 Oryza indica BGIOSGA008657 I 0.000
BGIOSGA014036 Oryza indica BGIOSGA014036 N 0.000
BGIOSGA033142 Oryza indica BGIOSGA033142 I 0.000
OMERI02G24320 Oryza meridionalis OMERI02G24320 I 0.000
OMERI04G25770 Oryza meridionalis OMERI04G25770 N 0.000
OMERI06G25370 Oryza meridionalis OMERI06G25370 I 0.000
OMERI10G10210 Oryza meridionalis OMERI10G10210 I 0.000
ONIVA02G27180 Oryza nivara ONIVA02G27180 I 0.000
ONIVA04G29840 Oryza nivara ONIVA04G29840 N 0.000
ONIVA06G28270 Oryza nivara ONIVA06G28270 I 0.000
ONIVA10G14700 Oryza nivara ONIVA10G14700 I 0.000
OPUNC02G22610 Oryza punctata OPUNC02G22610 I 0.000
OPUNC06G22960 Oryza punctata OPUNC06G22960 I 0.000
OPUNC10G11840 Oryza punctata OPUNC10G11840 I 0.000
ORUFI02G26180 Oryza rufipogon ORUFI02G26180 I 0.000
ORUFI06G27120 Oryza rufipogon ORUFI06G27120 I 0.000
ORUFI10G14150 Oryza rufipogon ORUFI10G14150 I 0.000
ARF8 Oryza sativa OS02G0628600 I 0.000
ARF13 Oryza sativa OS04G0690600 N 0.000
ARF18 Oryza sativa OS06G0685700 I 0.000
ARF22 Oryza sativa OS10G0479900 I 0.000
Pavir.Da00107 Panicum virgatum Pavir.Da00107 I 0.000
Pavir.J26437 Panicum virgatum Pavir.J26437 I 0.000
Pavir.J37640 Panicum virgatum Pavir.J37640 I 0.000
POPTR_0002s09050 Populus trichocarpa POPTR_0002s09050 I 0.000
POPTR_0004s22130 Populus trichocarpa POPTR_0004s22130 I 0.000
POPTR_0005s16320 Populus trichocarpa POPTR_0005s16320 I 0.000
POPTR_0006s12930 Populus trichocarpa POPTR_0006s12930 I 0.000
POPTR_0016s09150 Populus trichocarpa POPTR_0016s09150 I 0.000
POPTR_0848s00200 Populus trichocarpa POPTR_0848s00200 I 0.000
Pm019126 Prunus mume Pm019126 I 0.000
PRUPE_ppa003136mg Prunus persica PRUPE_ppa003136mg I 0.000
29908.m005953 Ricinus communis 29908.m005953 I 0.000
30078.m002329 Ricinus communis 30078.m002329 I 0.000
SapurV1A.0010s0540 Salix purpurea SapurV1A.0010s0540 I 0.000
SapurV1A.0141s0090 Salix purpurea SapurV1A.0141s0090 I 0.000
SapurV1A.0331s0130 Salix purpurea SapurV1A.0331s0130 I 0.000
SapurV1A.0986s0010 Salix purpurea SapurV1A.0986s0010 I 0.000
Si005991m.g Setaria italica Si005991m.g I 0.000
Si034525m.g Setaria italica Si034525m.g I 0.000
Solyc11g069500.1 Solanum lycopersicum Solyc11g069500.1 I 0.000
PGSC0003DMG400008081 Solanum tuberosum PGSC0003DMG400008081 I 0.000
Sb01g019130 Sorghum bicolor Sb01g019130 I 0.000
Sb10g027790 Sorghum bicolor Sb10g027790 I 0.000
TCM_022163 Theobroma cacao TCM_022163 I 0.000
TCM_035002 Theobroma cacao TCM_035002 I 0.000
AC207656.3_FG002 Zea mays AC207656.3_FG002 I 0.000