TCM_025676 (Theobroma cacao)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 TCM_025676 T256466_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
EOY10303 MADS box 10 58

Links

Other MADS box family TFs
Other Theobroma cacao TFs

27 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
evm.TU.contig_25049.5 Carica papaya evm.TU.contig_25049.5 I 0.702
evm.TU.contig_26058.1 Carica papaya evm.TU.contig_26058.1 I 0.711
evm.TU.contig_27586 Carica papaya evm.TU.contig_27586 I 0.864
evm.TU.contig_28448.4 Carica papaya evm.TU.contig_28448.4 I 0.708
evm.TU.contig_40499.2 Carica papaya evm.TU.contig_40499.2 I 0.708
evm.TU.contig_38146 Carica papaya evm.TU.contig_38146 I 0.727
Ciclev10013728m.g Citrus clementina Ciclev10013728m.g I 0.729
Ciclev10006519m.g Citrus clementina Ciclev10006519m.g I 0.729
gene18029-v1.0-hybrid Fragaria vesca gene18029-v1.0-hybrid I 0.729
gene22967-v1.0-hybrid Fragaria vesca gene22967-v1.0-hybrid I 0.708
cassava19828.m1 Manihot esculenta cassava19828.m1 I 0.729
POPTR_0013s00350 Populus trichocarpa POPTR_0013s00350 I 0.708
POPTR_0013s01880 Populus trichocarpa POPTR_0013s01880 I 0.771
Pm003257 Prunus mume Pm003257 I 0.723
Pm004396 Prunus mume Pm004396 I 0.733
PRUPE_ppa019749mg Prunus persica PRUPE_ppa019749mg I 0.723
PRUPE_ppa018168mg Prunus persica PRUPE_ppa018168mg I 0.733
30128.m008984 Ricinus communis 30128.m008984 I 0.792
30199.m000879 Ricinus communis 30199.m000879 I 0.702
SapurV1A.0066s0310 Salix purpurea SapurV1A.0066s0310 I 0.729
TCM_042848 Theobroma cacao TCM_042848 N 0.729
TCM_042799 Theobroma cacao TCM_042799 I 0.750
TCM_026845 Theobroma cacao TCM_026845 I 0.771
TCM_026842 Theobroma cacao TCM_026842 I 0.750
TCM_025671 Theobroma cacao TCM_025671 I 0.833
TCM_025670 Theobroma cacao TCM_025670 I 0.896
VIT_14s0060g00300 Vitis vinifera VIT_14s0060g00300 I 0.729