Bo5g126640 (Brassica oleracea)
MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01429 (MBD) IPR001739 Bo5g126640 T259935_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Bo5g126640.1 MBD 353 410

Links

Other MBD family TFs
Other Brassica oleracea TFs

3 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00041p00044170 Amborella trichopoda AMTR_s00041p00044170 I 0.000
Aquca_009_00560 Aquilegia coerulea Aquca_009_00560 I 0.000
Aquca_013_00578 Aquilegia coerulea Aquca_013_00578 I 0.000
Aquca_017_00683 Aquilegia coerulea Aquca_017_00683 I 0.000
Aquca_034_00401 Aquilegia coerulea Aquca_034_00401 I 0.000
LBD20 Arabidopsis lyrata fgenesh1_pg.C_scaffold_3000301 I 0.000
LBD29 Arabidopsis lyrata fgenesh2_kg.5__2263__AT3G58190.1 I 0.000
LBD30 Arabidopsis lyrata fgenesh2_kg.6__3680__AT4G00220.1 I 0.000
LBD16 Arabidopsis lyrata scaffold_403099.1 I 0.000
LBD16 Arabidopsis thaliana AT2G42430 D 0.000
LBD20 Arabidopsis thaliana AT3G03760 I 0.000
LBD29 Arabidopsis thaliana AT3G58190 I 0.000
LBD30 Arabidopsis thaliana AT4G00220 D 0.000
Bostr.14547s0031 Boechera stricta Bostr.14547s0031 I 0.000
Bostr.19046s0098 Boechera stricta Bostr.19046s0098 I 0.000
Bostr.20903s0070 Boechera stricta Bostr.20903s0070 I 0.000
Bostr.25993s0538 Boechera stricta Bostr.25993s0538 I 0.000
BRADI1G68170 Brachypodium distachyon BRADI1G68170 I 0.000
BRADI1G75110 Brachypodium distachyon BRADI1G75110 I 0.000
BRADI3G12550 Brachypodium distachyon BRADI3G12550 I 0.000
BRADI3G55680 Brachypodium distachyon BRADI3G55680 I 0.000
Bo1g153580 Brassica oleracea Bo1g153580 I 0.000
Bo3g036000 Brassica oleracea Bo3g036000 I 0.000
Bo3g036030 Brassica oleracea Bo3g036030 I 0.000
Bo4g016000 Brassica oleracea Bo4g016000 I 0.000
Bo4g191530 Brassica oleracea Bo4g191530 I 0.000
Bo4g195510 Brassica oleracea Bo4g195510 I 0.000
Bo8g092560 Brassica oleracea Bo8g092560 I 0.000
Bo9g002160 Brassica oleracea Bo9g002160 I 0.000
Bra000257 Brassica rapa Bra000257 I 0.000
Bra001087 Brassica rapa Bra001087 I 0.000
Bra004693 Brassica rapa Bra004693 I 0.000
Bra016877 Brassica rapa Bra016877 I 0.000
Bra036436 Brassica rapa Bra036436 I 0.000
Bra037323 Brassica rapa Bra037323 I 0.000
PK23380.1 Cannabis sativa PK23380.1 I 0.000
Cagra.0686s0035 Capsella grandiflora Cagra.0686s0035 I 0.000
Cagra.0686s0036 Capsella grandiflora Cagra.0686s0036 I 0.000
Cagra.1261s0014 Capsella grandiflora Cagra.1261s0014 I 0.000
Cagra.2098s0013 Capsella grandiflora Cagra.2098s0013 I 0.000
Cagra.2636s0029 Capsella grandiflora Cagra.2636s0029 I 0.000
Carubv10001875m.g Capsella rubella Carubv10001875m.g I 0.000
Carubv10015417m.g Capsella rubella Carubv10015417m.g I 0.000
Carubv10018619m.g Capsella rubella Carubv10018619m.g I 0.000
Carubv10019250m.g Capsella rubella Carubv10019250m.g I 0.000
Carubv10025548m.g Capsella rubella Carubv10025548m.g I 0.000
evm.TU.supercontig_18.118 Carica papaya evm.TU.supercontig_18.118 I 0.000
evm.TU.supercontig_50.42 Carica papaya evm.TU.supercontig_50.42 I 0.000
evm.TU.supercontig_50.43 Carica papaya evm.TU.supercontig_50.43 I 0.000
Ca_07763 Cicer arietinum Ca_07763 I 0.000
Ca_12213 Cicer arietinum Ca_12213 I 0.000
Cla002965 Citrullus lanatus Cla002965 I 0.000
Cla006087 Citrullus lanatus Cla006087 I 0.000
Cla006088 Citrullus lanatus Cla006088 I 0.000
Cla007068 Citrullus lanatus Cla007068 I 0.000
Ciclev10021843m.g Citrus clementina Ciclev10021843m.g I 0.000
Ciclev10021992m.g Citrus clementina Ciclev10021992m.g I 0.000
Ciclev10023341m.g Citrus clementina Ciclev10023341m.g I 0.000
Ciclev10024416m.g Citrus clementina Ciclev10024416m.g I 0.000
orange1.1g027399m.g Citrus sinensis orange1.1g027399m.g I 0.000
orange1.1g036534m.g Citrus sinensis orange1.1g036534m.g I 0.000
orange1.1g040761m.g Citrus sinensis orange1.1g040761m.g I 0.000
orange1.1g042813m.g Citrus sinensis orange1.1g042813m.g I 0.000
Cucsa.053440 Cucumis sativus Cucsa.053440 I 0.000
Cucsa.053450 Cucumis sativus Cucsa.053450 I 0.000
Cucsa.362830 Cucumis sativus Cucsa.362830 I 0.000
Cucsa.362840 Cucumis sativus Cucsa.362840 I 0.000
Eucgr.B01529 Eucalyptus grandis Eucgr.B01529 I 0.000
Eucgr.E01414 Eucalyptus grandis Eucgr.E01414 I 0.000
Eucgr.K03284 Eucalyptus grandis Eucgr.K03284 I 0.000
Thhalv10006226m.g Eutrema salsugineum Thhalv10006226m.g I 0.000
Thhalv10017158m.g Eutrema salsugineum Thhalv10017158m.g I 0.000
Thhalv10021301m.g Eutrema salsugineum Thhalv10021301m.g I 0.000
gene08250-v1.0-hybrid Fragaria vesca gene08250-v1.0-hybrid I 0.000
gene24461-v1.0-hybrid Fragaria vesca gene24461-v1.0-hybrid I 0.000
GLYMA03G02620 Glycine max GLYMA03G02620 I 0.000
GLYMA03G31830 Glycine max GLYMA03G31830 I 0.000
GLYMA10G04040 Glycine max GLYMA10G04040 I 0.000
GLYMA10G04050 Glycine max GLYMA10G04050 I 0.000
GLYMA13G18191 Glycine max GLYMA13G18191 I 0.000
GLYMA13G18210 Glycine max GLYMA13G18210 I 0.000
GLYMA19G34590 Glycine max GLYMA19G34590 I 0.000
Gorai.001G251600 Gossypium raimondii Gorai.001G251600 I 0.000
Gorai.001G251700 Gossypium raimondii Gorai.001G251700 I 0.000
Gorai.004G073200 Gossypium raimondii Gorai.004G073200 I 0.000
Gorai.004G073300 Gossypium raimondii Gorai.004G073300 I 0.000
Gorai.004G073400 Gossypium raimondii Gorai.004G073400 I 0.000
Gorai.004G161100 Gossypium raimondii Gorai.004G161100 I 0.000
Gorai.007G144400 Gossypium raimondii Gorai.007G144400 I 0.000
Gorai.007G144500 Gossypium raimondii Gorai.007G144500 I 0.000
Gorai.008G114400 Gossypium raimondii Gorai.008G114400 I 0.000
MLOC_10784 Hordeum vulgare MLOC_10784 I 0.000
MLOC_52276 Hordeum vulgare MLOC_52276 I 0.000
MLOC_55239 Hordeum vulgare MLOC_55239 I 0.000
MLOC_61947 Hordeum vulgare MLOC_61947 I 0.000
LPERR02G31040 Leersia perrieri LPERR02G31040 I 0.000
LPERR03G03470 Leersia perrieri LPERR03G03470 I 0.000
LPERR03G09330 Leersia perrieri LPERR03G09330 I 0.000
LPERR08G20530 Leersia perrieri LPERR08G20530 I 0.000
Lus10000613.g Linum usitatissimum Lus10000613.g I 0.000
Lus10000707.g Linum usitatissimum Lus10000707.g I 0.000
Lus10014757.g Linum usitatissimum Lus10014757.g I 0.000
Lus10024877.g Linum usitatissimum Lus10024877.g I 0.000
Lus10033872.g Linum usitatissimum Lus10033872.g I 0.000
Lus10033873.g Linum usitatissimum Lus10033873.g I 0.000
chr1.LjT38H23.30.nd Lotus japonicus chr1.LjT38H23.30.nd I 0.000
chr5.CM0494.160.nd Lotus japonicus chr5.CM0494.160.nd I 0.000
LjSGA_002536.2 Lotus japonicus LjSGA_002536.2 I 0.000
LjT35F15.70.nd Lotus japonicus LjT35F15.70.nd I 0.000
MDP0000131964 Malus domestica MDP0000131964 I 0.000
MDP0000145761 Malus domestica MDP0000145761 I 0.000
MDP0000254224 Malus domestica MDP0000254224 I 0.000
MDP0000322059 Malus domestica MDP0000322059 I 0.000
cassava15337.m1 Manihot esculenta cassava15337.m1 I 0.000
cassava15612.m1 Manihot esculenta cassava15612.m1 I 0.000
cassava25975.m1 Manihot esculenta cassava25975.m1 I 0.000
cassava28659.m1 Manihot esculenta cassava28659.m1 I 0.000
cassava36912.valid.m1 Manihot esculenta cassava36912.valid.m1 I 0.000
cassava40664.m1 Manihot esculenta cassava40664.m1 I 0.000
cassava41632.m1 Manihot esculenta cassava41632.m1 I 0.000
MTR_1g070205 Medicago truncatula MTR_1g070205 I 0.000
MTR_1g070220 Medicago truncatula MTR_1g070220 I 0.000
MTR_7g096530 Medicago truncatula MTR_7g096530 I 0.000
mgf020773m Mimulus guttatus mgf020773m I 0.000
mgf026090m Mimulus guttatus mgf026090m I 0.000
GSMUA_Achr10G06700_001 Musa acuminata GSMUA_Achr10G06700_001 I 0.000
GSMUA_Achr1G01350_001 Musa acuminata GSMUA_Achr1G01350_001 I 0.000
GSMUA_Achr1G01360_001 Musa acuminata GSMUA_Achr1G01360_001 I 0.000
GSMUA_Achr1G02520_001 Musa acuminata GSMUA_Achr1G02520_001 I 0.000
GSMUA_Achr1G06580_001 Musa acuminata GSMUA_Achr1G06580_001 I 0.000
GSMUA_Achr2G11240_001 Musa acuminata GSMUA_Achr2G11240_001 I 0.000
GSMUA_Achr3G27340_001 Musa acuminata GSMUA_Achr3G27340_001 I 0.000
GSMUA_Achr4G25190_001 Musa acuminata GSMUA_Achr4G25190_001 I 0.000
GSMUA_Achr5G11330_001 Musa acuminata GSMUA_Achr5G11330_001 I 0.000
GSMUA_AchrUn_randomG07730_001 Musa acuminata GSMUA_AchrUn_randomG07730_001 I 0.000
GSMUA_AchrUn_randomG10470_001 Musa acuminata GSMUA_AchrUn_randomG10470_001 I 0.000
GSMUA_AchrUn_randomG23710_001 Musa acuminata GSMUA_AchrUn_randomG23710_001 I 0.000
OBART02G37570 Oryza barthii OBART02G37570 I 0.000
OBART03G03820 Oryza barthii OBART03G03820 I 0.000
OBART03G03830 Oryza barthii OBART03G03830 I 0.000
OBART03G10450 Oryza barthii OBART03G10450 I 0.000
OBART08G23860 Oryza barthii OBART08G23860 I 0.000
OB02G44330 Oryza brachyantha OB02G44330 I 0.000
OB03G13890 Oryza brachyantha OB03G13890 I 0.000
OB03G20590 Oryza brachyantha OB03G20590 I 0.000
OB08G30680 Oryza brachyantha OB08G30680 I 0.000
OB10G12360 Oryza brachyantha OB10G12360 I 0.000
ORGLA02G0327800 Oryza glaberrima ORGLA02G0327800 I 0.000
ORGLA03G0035900 Oryza glaberrima ORGLA03G0035900 I 0.000
ORGLA03G0100400 Oryza glaberrima ORGLA03G0100400 I 0.000
ORGLA08G0192400 Oryza glaberrima ORGLA08G0192400 I 0.000
OGLUM02G38740 Oryza glumaepatula OGLUM02G38740 I 0.000
OGLUM03G03700 Oryza glumaepatula OGLUM03G03700 I 0.000
OGLUM03G03710 Oryza glumaepatula OGLUM03G03710 I 0.000
OGLUM03G10340 Oryza glumaepatula OGLUM03G10340 I 0.000
OGLUM08G25340 Oryza glumaepatula OGLUM08G25340 I 0.000
BGIOSGA005344 Oryza indica BGIOSGA005344 I 0.000
BGIOSGA011118 Oryza indica BGIOSGA011118 I 0.000
BGIOSGA011445 Oryza indica BGIOSGA011445 I 0.000
BGIOSGA026473 Oryza indica BGIOSGA026473 I 0.000
OLONG_001985 Oryza longistaminata OLONG_001985 I 0.000
OLONG_010223 Oryza longistaminata OLONG_010223 I 0.000
OLONG_020841 Oryza longistaminata OLONG_020841 I 0.000
OLONG_028429 Oryza longistaminata OLONG_028429 I 0.000
OMERI02G35350 Oryza meridionalis OMERI02G35350 I 0.000
OMERI03G09680 Oryza meridionalis OMERI03G09680 I 0.000
OMERI07G01660 Oryza meridionalis OMERI07G01660 I 0.000
OMERI08G18670 Oryza meridionalis OMERI08G18670 I 0.000
ONIVA02G40360 Oryza nivara ONIVA02G40360 I 0.000
ONIVA03G03570 Oryza nivara ONIVA03G03570 I 0.000
ONIVA03G03580 Oryza nivara ONIVA03G03580 I 0.000
ONIVA09G01330 Oryza nivara ONIVA09G01330 I 0.000
OPUNC02G34750 Oryza punctata OPUNC02G34750 I 0.000
OPUNC03G03520 Oryza punctata OPUNC03G03520 I 0.000
OPUNC03G10080 Oryza punctata OPUNC03G10080 I 0.000
OPUNC08G21770 Oryza punctata OPUNC08G21770 I 0.000
ORUFI02G39110 Oryza rufipogon ORUFI02G39110 I 0.000
ORUFI03G03540 Oryza rufipogon ORUFI03G03540 I 0.000
ORUFI03G03550 Oryza rufipogon ORUFI03G03550 I 0.000
ORUFI03G10670 Oryza rufipogon ORUFI03G10670 I 0.000
ORUFI08G26340 Oryza rufipogon ORUFI08G26340 I 0.000
OS02G0820500 Oryza sativa OS02G0820500 I 0.000
OS03G0149100 Oryza sativa OS03G0149100 I 0.000
OS03G0246900 Oryza sativa OS03G0246900 I 0.000
OS08G0563400 Oryza sativa OS08G0563400 I 0.000
Pavir.Aa00097 Panicum virgatum Pavir.Aa00097 I 0.000
Pavir.Fa00011 Panicum virgatum Pavir.Fa00011 I 0.000
Pavir.Ia04220 Panicum virgatum Pavir.Ia04220 I 0.000
Pavir.Ib00282 Panicum virgatum Pavir.Ib00282 I 0.000
Pavir.Ib00283 Panicum virgatum Pavir.Ib00283 I 0.000
Pavir.J03376 Panicum virgatum Pavir.J03376 I 0.000
Pavir.J24246 Panicum virgatum Pavir.J24246 I 0.000
Pavir.J34872 Panicum virgatum Pavir.J34872 I 0.000
Pavir.J39638 Panicum virgatum Pavir.J39638 I 0.000
PDK_20s1428661g002 Phoenix dactylifera PDK_20s1428661g002 I 0.000
gw1.190.59.1 Physcomitrella patens gw1.190.59.1 I 0.000
gw1.261.12.1 Physcomitrella patens gw1.261.12.1 I 0.000
gw1.35.169.1 Physcomitrella patens gw1.35.169.1 I 0.000
gw1.42.84.1 Physcomitrella patens gw1.42.84.1 I 0.000
gw1.61.81.1 Physcomitrella patens gw1.61.81.1 I 0.000
POPTR_0002s04200 Populus trichocarpa POPTR_0002s04200 I 0.000
POPTR_0002s04210 Populus trichocarpa POPTR_0002s04210 I 0.000
POPTR_0002s14990 Populus trichocarpa POPTR_0002s14990 I 0.000
POPTR_0005s24320 Populus trichocarpa POPTR_0005s24320 I 0.000
POPTR_0013s06070 Populus trichocarpa POPTR_0013s06070 I 0.000
POPTR_0047s00280 Populus trichocarpa POPTR_0047s00280 I 0.000
Pm017936 Prunus mume Pm017936 I 0.000
Pm020629 Prunus mume Pm020629 I 0.000
Pm028642 Prunus mume Pm028642 I 0.000
PRUPE_ppa010383mg Prunus persica PRUPE_ppa010383mg I 0.000
PRUPE_ppa024802mg Prunus persica PRUPE_ppa024802mg I 0.000
PRUPE_ppa025349mg Prunus persica PRUPE_ppa025349mg I 0.000
28428.m000040 Ricinus communis 28428.m000040 I 0.000
29883.m002035 Ricinus communis 29883.m002035 I 0.000
30072.m000955 Ricinus communis 30072.m000955 I 0.000
30174.m008898 Ricinus communis 30174.m008898 I 0.000
SapurV1A.0006s0980 Salix purpurea SapurV1A.0006s0980 I 0.000
SapurV1A.0024s0780 Salix purpurea SapurV1A.0024s0780 I 0.000
SapurV1A.0378s0180 Salix purpurea SapurV1A.0378s0180 I 0.000
SapurV1A.0532s0190 Salix purpurea SapurV1A.0532s0190 I 0.000
SapurV1A.1704s0040 Salix purpurea SapurV1A.1704s0040 I 0.000
SELMODRAFT_49270 Selaginella moellendorffii SELMODRAFT_49270 I 0.000
SELMODRAFT_59642 Selaginella moellendorffii SELMODRAFT_59642 I 0.000
Si015156m.g Setaria italica Si015156m.g I 0.000
Si019578m.g Setaria italica Si019578m.g I 0.000
Si037727m.g Setaria italica Si037727m.g I 0.000
Si040019m.g Setaria italica Si040019m.g I 0.000
Solyc01g091420.1 Solanum lycopersicum Solyc01g091420.1 I 0.000
Solyc01g098220.1 Solanum lycopersicum Solyc01g098220.1 I 0.000
Solyc06g083930.1 Solanum lycopersicum Solyc06g083930.1 I 0.000
Solyc09g066260.2 Solanum lycopersicum Solyc09g066260.2 I 0.000
PGSC0003DMG400009713 Solanum tuberosum PGSC0003DMG400009713 I 0.000
PGSC0003DMG400020069 Solanum tuberosum PGSC0003DMG400020069 I 0.000
PGSC0003DMG400022454 Solanum tuberosum PGSC0003DMG400022454 I 0.000
PGSC0003DMG402012772 Solanum tuberosum PGSC0003DMG402012772 I 0.000
Sb01g041130 Sorghum bicolor Sb01g041130 I 0.000
Sb01g046990 Sorghum bicolor Sb01g046990 I 0.000
Sb01g047000 Sorghum bicolor Sb01g047000 I 0.000
Sb04g037550 Sorghum bicolor Sb04g037550 I 0.000
Sb07g023810 Sorghum bicolor Sb07g023810 I 0.000
TCM_004103 Theobroma cacao TCM_004103 I 0.000
TCM_004106 Theobroma cacao TCM_004106 I 0.000
TCM_005496 Theobroma cacao TCM_005496 I 0.000
TCM_025849 Theobroma cacao TCM_025849 I 0.000
Traes_4AL_CAF4E16B5 Triticum aestivum Traes_4AL_CAF4E16B5 I 0.000
Traes_4AS_5971FF832 Triticum aestivum Traes_4AS_5971FF832 I 0.000
Traes_4BL_A4D0F4AD6 Triticum aestivum Traes_4BL_A4D0F4AD6 I 0.000
Traes_4DL_43D63ABE3 Triticum aestivum Traes_4DL_43D63ABE3 I 0.000
Traes_4DL_A2012EA68 Triticum aestivum Traes_4DL_A2012EA68 I 0.000
Traes_6AL_D6045E37C Triticum aestivum Traes_6AL_D6045E37C I 0.000
Traes_6DL_850266B2A Triticum aestivum Traes_6DL_850266B2A I 0.000
TRIUR3_01477 Triticum urartu TRIUR3_01477 I 0.000
VIT_07s0005g03020 Vitis vinifera VIT_07s0005g03020 I 0.000
LBD16 Vitis vinifera VIT_07s0005g03030 I 0.000
LBD20 Vitis vinifera VIT_08s0056g01650 I 0.000
LBD30 Vitis vinifera VIT_15s0048g00830 I 0.000
AC149818.2_FG009 Zea mays AC149818.2_FG009 I 0.000
GRMZM2G075499 Zea mays GRMZM2G075499 I 0.000
GRMZM2G092483 Zea mays GRMZM2G092483 I 0.000
GRMZM2G092542 Zea mays GRMZM2G092542 I 0.000
GRMZM2G110913 Zea mays GRMZM2G110913 I 0.000
GRMZM2G150594 Zea mays GRMZM2G150594 I 0.000