Ca_19192 (Cicer arietinum)
MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01429 (MBD) IPR001739 Ca_19192 T261238_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Ca_19192 MBD 10 83

Links

Other MBD family TFs
Other Cicer arietinum TFs

60 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00004p00169140 Amborella trichopoda AMTR_s00004p00169140 N 0.740
Aquca_020_00103 Aquilegia coerulea Aquca_020_00103 N 0.743
MBD11 Arabidopsis lyrata scaffold_301848.1 N 0.767
MBD10 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1001305 N 0.797
MBD10 Arabidopsis thaliana AT1G15340 N 0.797
MBD11 Arabidopsis thaliana AT3G15790 N 0.740
Bostr.7128s0147 Boechera stricta Bostr.7128s0147 N 0.770
Bostr.28625s0113 Boechera stricta Bostr.28625s0113 N 0.716
Bo8g106130 Brassica oleracea Bo8g106130 N 0.703
Bo8g066360 Brassica oleracea Bo8g066360 N 0.797
Bra016665 Brassica rapa Bra016665 N 0.797
Bra021136 Brassica rapa Bra021136 N 0.730
Bra027207 Brassica rapa Bra027207 N 0.703
PK24888.1 Cannabis sativa PK24888.1 N 0.770
PK04144.1 Cannabis sativa PK04144.1 N 0.757
Cagra.2238s0088 Capsella grandiflora Cagra.2238s0088 N 0.784
Carubv10009517m.g Capsella rubella Carubv10009517m.g N 0.784
Ca_06682 Cicer arietinum Ca_06682 N 0.781
Cla012920 Citrullus lanatus Cla012920 N 0.797
Cla015614 Citrullus lanatus Cla015614 N 0.703
Ciclev10025929m.g Citrus clementina Ciclev10025929m.g N 0.770
Ciclev10010753m.g Citrus clementina Ciclev10010753m.g N 0.776
orange1.1g022816m.g Citrus sinensis orange1.1g022816m.g N 0.767
orange1.1g022412m.g Citrus sinensis orange1.1g022412m.g N 0.743
Cucsa.096390 Cucumis sativus Cucsa.096390 N 0.757
Thhalv10007967m.g Eutrema salsugineum Thhalv10007967m.g N 0.784
gene15686-v1.0-hybrid Fragaria vesca gene15686-v1.0-hybrid N 0.703
gene31058-v1.0-hybrid Fragaria vesca gene31058-v1.0-hybrid N 0.716
GLYMA04G23780 Glycine max GLYMA04G23780 N 0.743
GLYMA04G23980 Glycine max GLYMA04G23980 N 0.716
GLYMA06G25310 Glycine max GLYMA06G25310 N 0.730
GLYMA06G30350 Glycine max GLYMA06G30350 N 0.703
GLYMA06G30590 Glycine max GLYMA06G30590 N 0.716
GLYMA15G01040 Glycine max GLYMA15G01040 N 0.865
GLYMA13G44230 Glycine max GLYMA13G44230 N 0.863
Gorai.006G101100 Gossypium raimondii Gorai.006G101100 N 0.770
Gorai.010G062800 Gossypium raimondii Gorai.010G062800 N 0.703
Gorai.011G083900 Gossypium raimondii Gorai.011G083900 N 0.811
Lus10002168.g Linum usitatissimum Lus10002168.g N 0.727
Lus10019406.g Linum usitatissimum Lus10019406.g N 0.739
chr4.CM0234.40.nc Lotus japonicus chr4.CM0234.40.nc N 0.743
chr3.CM0142.530.nd Lotus japonicus chr3.CM0142.530.nd N 0.847
MDP0000574053 Malus domestica MDP0000574053 N 0.730
MDP0000462461 Malus domestica MDP0000462461 N 0.707
MDP0000152128 Malus domestica MDP0000152128 N 0.730
MDP0000248422 Malus domestica MDP0000248422 N 0.757
MDP0000375866 Malus domestica MDP0000375866 N 0.730
cassava6704.valid.m1 Manihot esculenta cassava6704.valid.m1 N 0.784
MTR_4g114770 Medicago truncatula MTR_4g114770 N 0.708
POPTR_0018s12980 Populus trichocarpa POPTR_0018s12980 N 0.724
PRUPE_ppa009989mg Prunus persica PRUPE_ppa009989mg N 0.784
29841.m002855 Ricinus communis 29841.m002855 N 0.784
Solyc12g009590.1 Solanum lycopersicum Solyc12g009590.1 N 0.703
Solyc06g068140.2 Solanum lycopersicum Solyc06g068140.2 N 0.716
PGSC0003DMG400028533 Solanum tuberosum PGSC0003DMG400028533 N 0.703
PGSC0003DMG400002913 Solanum tuberosum PGSC0003DMG400002913 N 0.703
TCM_038107 Theobroma cacao TCM_038107 N 0.716
TCM_027169 Theobroma cacao TCM_027169 N 0.806
VIT_11s0016g05580 Vitis vinifera VIT_11s0016g05580 N 0.703
VIT_09s0002g06870 Vitis vinifera VIT_09s0002g06870 N 0.797