RR23 (Oryza sativa)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 OS02G0796500 T277152_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
e_gw1.362.4.1
M02341_2.00 		Physcomitrella patens
NNNRDATCNN
NNGATHYNNN		 PBM
Weirauch et al.(2014)
pTH8461 		0.791 0.894
estExt_fgenesh1_pg.C_Chr_16.00010090
M02367_2.00 		Ostreococcus tauri
NNNDATCN
NGATHNNN		 PBM
Weirauch et al.(2014)
pTH9644 		0.749 0.851
ARR14
M00873_2.00 		Arabidopsis thaliana
NNAGATHCKS
SMGDATCTNN		 PBM
Franco-Zorrilla et al.(2014)
ARR14 		0.727 0.830
ARR14
M02293_2.00 		Arabidopsis thaliana
NAGATHYBNN
NNVRDATCTN		 PBM
Weirauch et al.(2014)
pTH7531 		0.727 0.830
ARR1
M02296_2.00 		Arabidopsis thaliana
NDGATHYBNN
NNVRDATCHN		 PBM
Weirauch et al.(2014)
pTH8257 		0.726 0.872
ARR1
M02297_2.00 		Arabidopsis thaliana
NAAGATHCKN
NMGDATCTTN		 PBM
Weirauch et al.(2014)
pTH8590 		0.723 0.872
ARR18
M02313_2.00 		Arabidopsis thaliana
NNNNAGATAYGNN
NNCRTATCTNNNN		 PBM
Weirauch et al.(2014)
pTH8840 		0.709 0.809
PK07924.1
M01278_2.00 		Cannabis sativa
NGATHYNNN
NNNRDATCN		 PBM
Lambert et al.(2019)
pTH11431 		0.687 0.809
AT5G05090
M02305_2.00 		Arabidopsis thaliana
NHAGATHCKNN
NNMGDATCTDN		 PBM
Weirauch et al.(2014)
pTH7104 		0.664 0.681
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OS02T0796500-01 Myb 216 266
OS02T0796500-02 Myb 216 266
OS02T0796500-03 Myb 216 266

Links

Other Myb/SANT family TFs
Other Oryza sativa TFs

488 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00111p00072510 Amborella trichopoda AMTR_s00111p00072510 N
Aquca_081_00025 Aquilegia coerulea Aquca_081_00025 N
Aquca_002_00029 Aquilegia coerulea Aquca_002_00029 N
DUO1 Arabidopsis lyrata fgenesh2_kg.5__2511__AT3G60460.1 N
DUO1 Arabidopsis thaliana AT3G60460 N
Bostr.13158s0042 Boechera stricta Bostr.13158s0042 N
Bostr.13158s0046 Boechera stricta Bostr.13158s0046 N
BRADI5G17600 Brachypodium distachyon BRADI5G17600 N
Bo8g095200 Brassica oleracea Bo8g095200 N
Bo6g077030 Brassica oleracea Bo6g077030 N
Bra003413 Brassica rapa Bra003413 N
Bra007536 Brassica rapa Bra007536 N
Cagra.3527s0008 Capsella grandiflora Cagra.3527s0008 N
Carubv10019483m.g Capsella rubella Carubv10019483m.g N
evm.TU.supercontig_37.96 Carica papaya evm.TU.supercontig_37.96 N
Ca_19557 Cicer arietinum Ca_19557 N
Ca_18954 Cicer arietinum Ca_18954 N
Cla006831 Citrullus lanatus Cla006831 N
Cla010897 Citrullus lanatus Cla010897 N
Ciclev10021345m.g Citrus clementina Ciclev10021345m.g N
orange1.1g038795m.g Citrus sinensis orange1.1g038795m.g N
Cucsa.121070 Cucumis sativus Cucsa.121070 N
Cucsa.094180 Cucumis sativus Cucsa.094180 N
Eucgr.E01581 Eucalyptus grandis Eucgr.E01581 N
Thhalv10006475m.g Eutrema salsugineum Thhalv10006475m.g N
gene12261-v1.0-hybrid Fragaria vesca gene12261-v1.0-hybrid N
gene04800-v1.0-hybrid Fragaria vesca gene04800-v1.0-hybrid N
GLYMA03G26830 Glycine max GLYMA03G26830 N
GLYMA12G37026 Glycine max GLYMA12G37026 N
GLYMA09G00371 Glycine max GLYMA09G00371 N
GLYMA07G14480 Glycine max GLYMA07G14480 N
Gorai.003G112700 Gossypium raimondii Gorai.003G112700 N
Gorai.004G165400 Gossypium raimondii Gorai.004G165400 N
LPERR04G16870 Leersia perrieri LPERR04G16870 N
Lus10009780.g Linum usitatissimum Lus10009780.g N
LjT36B17.50.nd Lotus japonicus LjT36B17.50.nd N
MDP0000319634 Malus domestica MDP0000319634 N
MDP0000237596 Malus domestica MDP0000237596 N
cassava19913.m1 Manihot esculenta cassava19913.m1 N
cassava17368.m1 Manihot esculenta cassava17368.m1 N
MTR_8g006470 Medicago truncatula MTR_8g006470 N
MTR_4g029540 Medicago truncatula MTR_4g029540 N
mgf004314m Mimulus guttatus mgf004314m N
mgf019330m Mimulus guttatus mgf019330m N
GSMUA_Achr1G01660_001 Musa acuminata GSMUA_Achr1G01660_001 N
OBART04G20790 Oryza barthii OBART04G20790 N
OB04G27810 Oryza brachyantha OB04G27810 N
ORGLA04G0178400 Oryza glaberrima ORGLA04G0178400 N
OGLUM04G20730 Oryza glumaepatula OGLUM04G20730 N
BGIOSGA016880 Oryza indica BGIOSGA016880 N
OMERI04G17240 Oryza meridionalis OMERI04G17240 N
ONIVA04G19030 Oryza nivara ONIVA04G19030 N
OPUNC04G18480 Oryza punctata OPUNC04G18480 N
ORUFI04G22380 Oryza rufipogon ORUFI04G22380 N
Pavir.Fa00479 Panicum virgatum Pavir.Fa00479 N
Pavir.Fb01900 Panicum virgatum Pavir.Fb01900 N
Pavir.Gb01130 Panicum virgatum Pavir.Gb01130 N
Pavir.J30013 Panicum virgatum Pavir.J30013 N
Pavir.J35399 Panicum virgatum Pavir.J35399 N
POPTR_0002s14180 Populus trichocarpa POPTR_0002s14180 N
POPTR_0014s05420 Populus trichocarpa POPTR_0014s05420 N
Pm031387 Prunus mume Pm031387 N
Pm019530 Prunus mume Pm019530 N
Pm017596 Prunus mume Pm017596 N
PRUPE_ppa016603mg Prunus persica PRUPE_ppa016603mg N
PRUPE_ppa020326mg Prunus persica PRUPE_ppa020326mg N
30174.m008784 Ricinus communis 30174.m008784 N
SapurV1A.0490s0170 Salix purpurea SapurV1A.0490s0170 N
SapurV1A.0033s0200 Salix purpurea SapurV1A.0033s0200 N
SELMODRAFT_118852 Selaginella moellendorffii SELMODRAFT_118852 N
SELMODRAFT_116971 Selaginella moellendorffii SELMODRAFT_116971 N
Si012032m.g Setaria italica Si012032m.g N
Si015815m.g Setaria italica Si015815m.g N
Solyc10g019260.1 Solanum lycopersicum Solyc10g019260.1 N
Solyc01g090530.1 Solanum lycopersicum Solyc01g090530.1 N
PGSC0003DMG400025720 Solanum tuberosum PGSC0003DMG400025720 N
Sb07g027160 Sorghum bicolor Sb07g027160 N
Sb06g024510 Sorghum bicolor Sb06g024510 N
TCM_014872 Theobroma cacao TCM_014872 N
TCM_005653 Theobroma cacao TCM_005653 N
Traes_2DL_912473A86 Triticum aestivum Traes_2DL_912473A86 N
Traes_2BL_855A1170C Triticum aestivum Traes_2BL_855A1170C N
Traes_2AL_0A21FB42C Triticum aestivum Traes_2AL_0A21FB42C N
DUO1 Vitis vinifera VIT_15s0021g02040 N
GRMZM2G311059 Zea mays GRMZM2G311059 N
GRMZM2G105137 Zea mays GRMZM2G105137 N
GRMZM2G046443 Zea mays GRMZM2G046443 N