Carubv10019483m.g (Capsella rubella)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Carubv10019483m.g T286391_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10019483m Myb 10 57
Carubv10019483m Myb 64 108

Links

Other Myb/SANT family TFs
Other Capsella rubella TFs

87 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00111p00072510 Amborella trichopoda AMTR_s00111p00072510 N 0.723
Aquca_002_00029 Aquilegia coerulea Aquca_002_00029 N 0.762
Aquca_081_00025 Aquilegia coerulea Aquca_081_00025 N 0.778
DUO1 Arabidopsis lyrata fgenesh2_kg.5__2511__AT3G60460.1 N 0.884
DUO1 Arabidopsis thaliana AT3G60460 N 0.884
Bostr.13158s0042 Boechera stricta Bostr.13158s0042 N 0.884
Bostr.13158s0046 Boechera stricta Bostr.13158s0046 N 0.816
BRADI5G17600 Brachypodium distachyon BRADI5G17600 N 0.776
Bo6g077030 Brassica oleracea Bo6g077030 N 0.875
Bo8g095200 Brassica oleracea Bo8g095200 N 0.835
Bra003413 Brassica rapa Bra003413 N 0.884
Bra007536 Brassica rapa Bra007536 N 0.835
Cagra.3527s0008 Capsella grandiflora Cagra.3527s0008 N 0.909
evm.TU.supercontig_37.96 Carica papaya evm.TU.supercontig_37.96 N 0.849
Ca_18954 Cicer arietinum Ca_18954 N 0.791
Ca_19557 Cicer arietinum Ca_19557 N 0.727
Cla006831 Citrullus lanatus Cla006831 N 0.839
Cla010897 Citrullus lanatus Cla010897 N 0.733
Ciclev10021345m.g Citrus clementina Ciclev10021345m.g N 0.807
orange1.1g038795m.g Citrus sinensis orange1.1g038795m.g N 0.807
Cucsa.121070 Cucumis sativus Cucsa.121070 N 0.825
Cucsa.094180 Cucumis sativus Cucsa.094180 N 0.709
Eucgr.E01581 Eucalyptus grandis Eucgr.E01581 N 0.820
Thhalv10006475m.g Eutrema salsugineum Thhalv10006475m.g N 0.869
gene04800-v1.0-hybrid Fragaria vesca gene04800-v1.0-hybrid N 0.800
gene12261-v1.0-hybrid Fragaria vesca gene12261-v1.0-hybrid N 0.783
GLYMA03G26830 Glycine max GLYMA03G26830 N 0.802
GLYMA12G37026 Glycine max GLYMA12G37026 N 0.718
GLYMA09G00371 Glycine max GLYMA09G00371 N 0.721
GLYMA07G14480 Glycine max GLYMA07G14480 N 0.793
Gorai.003G112700 Gossypium raimondii Gorai.003G112700 N 0.713
Gorai.004G165400 Gossypium raimondii Gorai.004G165400 N 0.801
LPERR04G16870 Leersia perrieri LPERR04G16870 N 0.674
Lus10009780.g Linum usitatissimum Lus10009780.g N 0.731
LjT36B17.50.nd Lotus japonicus LjT36B17.50.nd N 0.855
MDP0000319634 Malus domestica MDP0000319634 N 0.829
MDP0000237596 Malus domestica MDP0000237596 N 0.829
cassava19913.m1 Manihot esculenta cassava19913.m1 N 0.817
cassava17368.m1 Manihot esculenta cassava17368.m1 N 0.784
MTR_4g029540 Medicago truncatula MTR_4g029540 N 0.776
MTR_8g006470 Medicago truncatula MTR_8g006470 N 0.783
mgf019330m Mimulus guttatus mgf019330m N 0.807
mgf004314m Mimulus guttatus mgf004314m N 0.675
GSMUA_Achr1G01660_001 Musa acuminata GSMUA_Achr1G01660_001 N 0.722
OBART04G20790 Oryza barthii OBART04G20790 N 0.800
OB04G27810 Oryza brachyantha OB04G27810 N 0.800
ORGLA04G0178400 Oryza glaberrima ORGLA04G0178400 N 0.800
OGLUM04G20730 Oryza glumaepatula OGLUM04G20730 N 0.800
BGIOSGA016880 Oryza indica BGIOSGA016880 N 0.800
OMERI04G17240 Oryza meridionalis OMERI04G17240 N 0.800
ONIVA04G19030 Oryza nivara ONIVA04G19030 N 0.800
OPUNC04G18480 Oryza punctata OPUNC04G18480 N 0.800
ORUFI04G22380 Oryza rufipogon ORUFI04G22380 N 0.800
Pavir.Fa00479 Panicum virgatum Pavir.Fa00479 N 0.779
Pavir.Fb01900 Panicum virgatum Pavir.Fb01900 N 0.810
Pavir.Gb01130 Panicum virgatum Pavir.Gb01130 N 0.815
Pavir.J35399 Panicum virgatum Pavir.J35399 N 0.808
Pavir.J30013 Panicum virgatum Pavir.J30013 N 0.808
POPTR_0014s05420 Populus trichocarpa POPTR_0014s05420 N 0.849
POPTR_0014s05370 Populus trichocarpa POPTR_0014s05370 N 0.849
POPTR_0002s14180 Populus trichocarpa POPTR_0002s14180 N 0.879
Pm017596 Prunus mume Pm017596 N 0.829
Pm019530 Prunus mume Pm019530 N 0.796
Pm031387 Prunus mume Pm031387 N 0.796
PRUPE_ppa016603mg Prunus persica PRUPE_ppa016603mg N 0.796
PRUPE_ppa020326mg Prunus persica PRUPE_ppa020326mg N 0.804
30174.m008784 Ricinus communis 30174.m008784 N 0.832
SapurV1A.0033s0200 Salix purpurea SapurV1A.0033s0200 N 0.876
SapurV1A.0490s0170 Salix purpurea SapurV1A.0490s0170 N 0.856
SELMODRAFT_118852 Selaginella moellendorffii SELMODRAFT_118852 N 0.677
SELMODRAFT_116971 Selaginella moellendorffii SELMODRAFT_116971 N 0.677
Si015815m.g Setaria italica Si015815m.g N 0.776
Si012032m.g Setaria italica Si012032m.g N 0.815
Solyc10g019260.1 Solanum lycopersicum Solyc10g019260.1 N 0.755
Solyc01g090530.1 Solanum lycopersicum Solyc01g090530.1 N 0.794
PGSC0003DMG400025720 Solanum tuberosum PGSC0003DMG400025720 N 0.790
Sb07g027160 Sorghum bicolor Sb07g027160 N 0.760
Sb06g024510 Sorghum bicolor Sb06g024510 N 0.772
TCM_005653 Theobroma cacao TCM_005653 N 0.849
TCM_014872 Theobroma cacao TCM_014872 N 0.742
Traes_2AL_0A21FB42C Triticum aestivum Traes_2AL_0A21FB42C N 0.804
Traes_2BL_855A1170C Triticum aestivum Traes_2BL_855A1170C N 0.804
Traes_2DL_912473A86 Triticum aestivum Traes_2DL_912473A86 N 0.778
DUO1 Vitis vinifera VIT_15s0021g02040 N 0.807
GRMZM2G105137 Zea mays GRMZM2G105137 N 0.800
GRMZM2G311059 Zea mays GRMZM2G311059 N 0.762
GRMZM2G046443 Zea mays GRMZM2G046443 N 0.743