CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Lus10004846.g
(
Linum usitatissimum
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
Lus10004846.g
T298209_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Lus10004846
NAC/NAM
6
137
PPGFRFFPTEEELVSFYLHKQLEGTIQEGLHQVIPVVDIYAIDPWHLPSVAGERCRGDTEQWFYFTPRQEREARGGRPNRTTGSGYWKATGSTSYVYSSNNRVIGVKKTMVFYKGKAPAGRKTKWKMNEYRA
Links
Other
NAC/NAM
family TFs
Other
Linum usitatissimum
TFs
128 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AMTR_s00088p00161000
Amborella trichopoda
AMTR_s00088p00161000
N
Aquca_005_00234
Aquilegia coerulea
Aquca_005_00234
N
Aquca_028_00248
Aquilegia coerulea
Aquca_028_00248
N
PAT1
Arabidopsis lyrata
scaffold_801100.1
N
SCL5
Arabidopsis lyrata
fgenesh2_kg.1__4145__AT1G50600.1
N
SCL5
Arabidopsis thaliana
AT1G50600
N
PAT1
Arabidopsis thaliana
AT5G48150
N
Bostr.26675s0117
Boechera stricta
Bostr.26675s0117
N
Bostr.5224s0004
Boechera stricta
Bostr.5224s0004
N
Bo7g089080
Brassica oleracea
Bo7g089080
N
Bo2g149670
Brassica oleracea
Bo2g149670
N
Bo6g022330
Brassica oleracea
Bo6g022330
N
Bo9g009260
Brassica oleracea
Bo9g009260
N
Bra018860
Brassica rapa
Bra018860
N
Bra020715
Brassica rapa
Bra020715
N
Bra036185
Brassica rapa
Bra036185
N
Bra037509
Brassica rapa
Bra037509
N
PK15082.1
Cannabis sativa
PK15082.1
N
PK09018.1
Cannabis sativa
PK09018.1
N
Cagra.7055s0004
Capsella grandiflora
Cagra.7055s0004
N
Cagra.2766s0005
Capsella grandiflora
Cagra.2766s0005
N
Carubv10008830m.g
Capsella rubella
Carubv10008830m.g
N
Carubv10026289m.g
Capsella rubella
Carubv10026289m.g
N
evm.TU.supercontig_12.194
Carica papaya
evm.TU.supercontig_12.194
N
evm.TU.supercontig_136.17
Carica papaya
evm.TU.supercontig_136.17
N
Ca_09786
Cicer arietinum
Ca_09786
N
Cla001429
Citrullus lanatus
Cla001429
N
Cla004565
Citrullus lanatus
Cla004565
N
Ciclev10007927m.g
Citrus clementina
Ciclev10007927m.g
N
Ciclev10014845m.g
Citrus clementina
Ciclev10014845m.g
N
orange1.1g009376m.g
Citrus sinensis
orange1.1g009376m.g
N
Cucsa.120390
Cucumis sativus
Cucsa.120390
N
Cucsa.042310
Cucumis sativus
Cucsa.042310
N
Eucgr.F03523
Eucalyptus grandis
Eucgr.F03523
N
Eucgr.A01051
Eucalyptus grandis
Eucgr.A01051
N
Thhalv10004053m.g
Eutrema salsugineum
Thhalv10004053m.g
N
Thhalv10011379m.g
Eutrema salsugineum
Thhalv10011379m.g
N
gene03551-v1.0-hybrid
Fragaria vesca
gene03551-v1.0-hybrid
N
gene21592-v1.0-hybrid
Fragaria vesca
gene21592-v1.0-hybrid
N
GLYMA02G47640
Glycine max
GLYMA02G47640
N
GLYMA14G01960
Glycine max
GLYMA14G01960
N
GLYMA14G01020
Glycine max
GLYMA14G01020
N
GLYMA02G46730
Glycine max
GLYMA02G46730
N
Gorai.001G192800
Gossypium raimondii
Gorai.001G192800
N
Gorai.002G096300
Gossypium raimondii
Gorai.002G096300
N
Gorai.007G167000
Gossypium raimondii
Gorai.007G167000
N
Gorai.009G446100
Gossypium raimondii
Gorai.009G446100
N
Lus10016596.g
Linum usitatissimum
Lus10016596.g
N
Lus10012323.g
Linum usitatissimum
Lus10012323.g
N
MDP0000804652
Malus domestica
MDP0000804652
N
MDP0000284679
Malus domestica
MDP0000284679
N
MDP0000205236
Malus domestica
MDP0000205236
N
MDP0000152670
Malus domestica
MDP0000152670
N
cassava34699.m1
Manihot esculenta
cassava34699.m1
N
cassava10826.m1
Manihot esculenta
cassava10826.m1
N
MTR_5g097480
Medicago truncatula
MTR_5g097480
N
Pavir.Ba00562
Panicum virgatum
Pavir.Ba00562
N
PDK_20s1411471g003
Phoenix dactylifera
PDK_20s1411471g003
N
SCL5
Populus trichocarpa
POPTR_0001s37270
N
POPTR_0014s16230
Populus trichocarpa
POPTR_0014s16230
N
Pm015021
Prunus mume
Pm015021
N
Pm012019
Prunus mume
Pm012019
N
PRUPE_ppa004136mg
Prunus persica
PRUPE_ppa004136mg
N
PRUPE_ppa003702mg
Prunus persica
PRUPE_ppa003702mg
N
27613.m000642
Ricinus communis
27613.m000642
N
SapurV1A.0030s0420
Salix purpurea
SapurV1A.0030s0420
N
SapurV1A.0054s0160
Salix purpurea
SapurV1A.0054s0160
N
Solyc07g047950.1
Solanum lycopersicum
Solyc07g047950.1
N
Solyc07g065270.1
Solanum lycopersicum
Solyc07g065270.1
N
PGSC0003DMG400022187
Solanum tuberosum
PGSC0003DMG400022187
N
PGSC0003DMG400006132
Solanum tuberosum
PGSC0003DMG400006132
N
TCM_002319
Theobroma cacao
TCM_002319
N
TCM_030733
Theobroma cacao
TCM_030733
N
VIT_12s0057g00560
Vitis vinifera
VIT_12s0057g00560
N
SCL5
Vitis vinifera
VIT_19s0090g01740
N