PAS_chr1-1_0442 (Komagataella pastoris)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 PAS_chr1-1_0442 T331759_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
CAY67819 Sox 125 149
CAY67819 Sox 157 205

Links

Other Sox family TFs
Other Komagataella pastoris TFs

44 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CC1G_07855 Coprinopsis cinerea CC1G_07855 N 0.417
UCREL1_5722 Eutypa lata UCREL1_5722 N 0.457
estExt_fgenesh2_kg.C_130080 Fragilariopsis cylindrus estExt_fgenesh2_kg.C_130080 N 0.429
GPLIN_000170600 Globodera pallida GPLIN_000170600 N 0.451
estExt_Genewise1.C_120062 Heterobasidion annosum estExt_Genewise1.C_120062 N 0.488
HETIRDRAFT_460226 Heterobasidion irregulare HETIRDRAFT_460226 N 0.488
JAAARDRAFT_460099 Jaapia argillacea JAAARDRAFT_460099 N 0.439
SAKL0D09922g Lachancea kluyveri SAKL0D09922g N 0.472
SAKL0C10648g Lachancea kluyveri SAKL0C10648g N 0.472
SAKL0C03872g Lachancea kluyveri SAKL0C03872g N 0.477
SAKL0C03916g Lachancea kluyveri SAKL0C03916g N 0.477
LALA0_S01e08702g Lachancea lanzarotensis LALA0_S01e08702g N 0.465
MVLG_01553 Microbotryum violaceum MVLG_01553 N 0.470
MPER_12197 Moniliophthora perniciosa MPER_12197 N 0.472
Moror_8439 Moniliophthora roreri Moror_8439 N 0.476
MYCTH_2294733 Myceliophthora thermophila MYCTH_2294733 N 0.439
NCLIV_023590 Neospora caninum NCLIV_023590 N 0.415
HPODL_02662 Ogataea parapolymorpha HPODL_02662 N 0.419
Phatr3_J49938 Phaeodactylum tricornutum Phatr3_J49938 N 0.439
Phatr3_J50240 Phaeodactylum tricornutum Phatr3_J50240 N 0.459
Phatr3_J47350 Phaeodactylum tricornutum Phatr3_J47350 N 0.462
Phatr3_J39045 Phaeodactylum tricornutum Phatr3_J39045 N 0.430
Phatr3_J38097 Phaeodactylum tricornutum Phatr3_J38097 N 0.444
Phatr3_J33840 Phaeodactylum tricornutum Phatr3_J33840 N 0.476
XP_002490100.1 Pichia pastoris XP_002490100.1 N 0.741
GLOINDRAFT_9339 Rhizophagus irregularis GLOINDRAFT_9339 N 0.520
RHTO_04537 Rhodosporidium toruloides RHTO_04537 N 0.471
SCHCODRAFT_110960 Schizophyllum commune SCHCODRAFT_110960 N 0.447
fgenesh1_pg.C_scaffold_11000089 Sporobolomyces roseus fgenesh1_pg.C_scaffold_11000089 N 0.471
S40285_05706 Stachybotrys chlorohalonata S40285_05706 N 0.419
TSTA_110260 Talaromyces stipitatus TSTA_110260 N 0.439
Thaps11168 Thalassiosira pseudonana Thaps11168 N 0.467
Thapsdraft651 Thalassiosira pseudonana Thapsdraft651 N 0.430
Thapsdraft1840 Thalassiosira pseudonana Thapsdraft1840 N 0.457
Thaps5285 Thalassiosira pseudonana Thaps5285 N 0.440
Thaps25909 Thalassiosira pseudonana Thaps25909 N 0.506
Thaps24755 Thalassiosira pseudonana Thaps24755 N 0.432
Thaps23446 Thalassiosira pseudonana Thaps23446 N 0.446
Thaps22858 Thalassiosira pseudonana Thaps22858 N 0.421
K437DRAFT_66818 Tilletiaria anomala K437DRAFT_66818 N 0.434
K437DRAFT_266676 Tilletiaria anomala K437DRAFT_266676 N 0.507
TGME49_081900 Toxoplasma gondii TGME49_081900 N 0.418
A1Q1_02593 Trichosporon asahii A1Q1_02593 N 0.472
M407DRAFT_45069 Tulasnella calospora M407DRAFT_45069 N 0.424