MTR_8g006840 (Medicago truncatula)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 MTR_8g006840 T002951_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ERF13
M01615_2.00
Arabidopsis thaliana
VGCCGSCD

HGSCGGCB
PBM
Weirauch et al.(2014)
pTH7283
0.717 0.837
ERF13
M06612_2.00
Arabidopsis thaliana
NHDBMGCCGCCDYHD

HDRHGGCGGCKVHDN
Dap-seq
OMalley et al.(2016)
ERF13_colamp_a
0.717 0.837
ERF13
M06613_2.00
Arabidopsis thaliana
HDBMGCCGCCDYHDN

NHDRHGGCGGCKVHD
Dap-seq
OMalley et al.(2016)
ERF13_col_b
0.717 0.837
ERF098
M01618_2.00
Arabidopsis thaliana
NNGCCGNC

GNCGGCNN
PBM
Weirauch et al.(2014)
pTH8259
0.698 0.755
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
KEH17840 AP2 123 175

Links

Other AP2 family TFs
Other Medicago truncatula TFs

135 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Ca_17211 Cicer arietinum Ca_17211 I 0.820
orange1.1g044584m.g Citrus sinensis orange1.1g044584m.g I 0.751
Lus10016209.g Linum usitatissimum Lus10016209.g I 0.750
Gorai.004G070600 Gossypium raimondii Gorai.004G070600 I 0.738
GLYMA07G13980 Glycine max GLYMA07G13980 I 0.737
TCM_005705 Theobroma cacao TCM_005705 I 0.736
Gorai.004G165800 Gossypium raimondii Gorai.004G165800 I 0.735
Lus10016210.g Linum usitatissimum Lus10016210.g I 0.730
Cla021383 Citrullus lanatus Cla021383 I 0.728
Eucgr.G00392 Eucalyptus grandis Eucgr.G00392 I 0.728
Eucgr.G00397 Eucalyptus grandis Eucgr.G00397 I 0.728
POPTR_0014s04640 Populus trichocarpa POPTR_0014s04640 I 0.728
PRUPE_ppb014367mg Prunus persica PRUPE_ppb014367mg I 0.727
Gorai.004G070800 Gossypium raimondii Gorai.004G070800 I 0.726
Gorai.004G070500 Gossypium raimondii Gorai.004G070500 I 0.726
TCM_005706 Theobroma cacao TCM_005706 I 0.725
SapurV1A.0124s0170 Salix purpurea SapurV1A.0124s0170 I 0.725
Gorai.008G108500 Gossypium raimondii Gorai.008G108500 I 0.725
Lus10029331.g Linum usitatissimum Lus10029331.g I 0.725
Eucgr.G00002 Eucalyptus grandis Eucgr.G00002 I 0.722
POPTR_0014s04600 Populus trichocarpa POPTR_0014s04600 I 0.722
Gorai.007G086000 Gossypium raimondii Gorai.007G086000 I 0.721
PRUPE_ppa016903mg Prunus persica PRUPE_ppa016903mg I 0.721
Pm017696 Prunus mume Pm017696 I 0.721
POPTR_0014s04610 Populus trichocarpa POPTR_0014s04610 I 0.720
cassava19881.m1 Manihot esculenta cassava19881.m1 I 0.720
chr3.CM0080.200.nd Lotus japonicus chr3.CM0080.200.nd I 0.720
ATERF13 Arabidopsis lyrata scaffold_403422.1 I 0.717
Cagra.0239s0035 Capsella grandiflora Cagra.0239s0035 I 0.717
Pm017699 Prunus mume Pm017699 I 0.717
Lus10030261.g Linum usitatissimum Lus10030261.g I 0.717
ERF13 Arabidopsis thaliana AT2G44840 D 0.717
Lus10004011.g Linum usitatissimum Lus10004011.g I 0.717
Carubv10023967m.g Capsella rubella Carubv10023967m.g I 0.717
Thhalv10001758m.g Eutrema salsugineum Thhalv10001758m.g I 0.717
Bo4g024140 Brassica oleracea Bo4g024140 I 0.717
Bra037630 Brassica rapa Bra037630 I 0.717
Bo4g195220 Brassica oleracea Bo4g195220 I 0.717
Bra004873 Brassica rapa Bra004873 I 0.717
Cucsa.260040 Cucumis sativus Cucsa.260040 I 0.716
MTR_8g006825 Medicago truncatula MTR_8g006825 I 0.716
Lus10029333.g Linum usitatissimum Lus10029333.g I 0.716
cassava19882.m1 Manihot esculenta cassava19882.m1 I 0.716
Lus10016212.g Linum usitatissimum Lus10016212.g I 0.715
GLYMA03G26520 Glycine max GLYMA03G26520 I 0.715
Eucgr.G00390 Eucalyptus grandis Eucgr.G00390 I 0.714
30174.m008755 Ricinus communis 30174.m008755 I 0.714
Eucgr.G00391 Eucalyptus grandis Eucgr.G00391 I 0.714
MDP0000153445 Malus domestica MDP0000153445 I 0.713
gene04917-v1.0-hybrid Fragaria vesca gene04917-v1.0-hybrid I 0.713
MDP0000317950 Malus domestica MDP0000317950 I 0.713
TCM_005707 Theobroma cacao TCM_005707 I 0.712
Eucgr.G00388 Eucalyptus grandis Eucgr.G00388 I 0.712
Thhalv10022108m.g Eutrema salsugineum Thhalv10022108m.g I 0.711
gene04913-v1.0-hybrid Fragaria vesca gene04913-v1.0-hybrid I 0.711
evm.TU.supercontig_101.15 Carica papaya evm.TU.supercontig_101.15 I 0.711
Lus10029318.g Linum usitatissimum Lus10029318.g I 0.710
Lus10016224.g Linum usitatissimum Lus10016224.g I 0.710
Bo7g040810 Brassica oleracea Bo7g040810 I 0.709
Bra014925 Brassica rapa Bra014925 I 0.709
MDP0000907929 Malus domestica MDP0000907929 I 0.708
MDP0000189033 Malus domestica MDP0000189033 I 0.708
MDP0000133485 Malus domestica MDP0000133485 I 0.708
chr3.CM0080.270.nc Lotus japonicus chr3.CM0080.270.nc I 0.707
Lus10016225.g Linum usitatissimum Lus10016225.g I 0.707
Eucgr.G00396 Eucalyptus grandis Eucgr.G00396 I 0.706
Eucgr.G00394 Eucalyptus grandis Eucgr.G00394 I 0.706
Eucgr.G00393 Eucalyptus grandis Eucgr.G00393 I 0.706
Lus10029334.g Linum usitatissimum Lus10029334.g I 0.705
cassava19883.m1 Manihot esculenta cassava19883.m1 I 0.705
Lus10016223.g Linum usitatissimum Lus10016223.g I 0.703
30174.m008756 Ricinus communis 30174.m008756 I 0.702
Ciclev10022025m.g Citrus clementina Ciclev10022025m.g I 0.701
orange1.1g047100m.g Citrus sinensis orange1.1g047100m.g I 0.701
evm.TU.supercontig_44.73 Carica papaya evm.TU.supercontig_44.73 I 0.700
Bostr.14547s0008 Boechera stricta Bostr.14547s0008 I 0.700
Pm017700 Prunus mume Pm017700 I 0.700
Bo1g102220 Brassica oleracea Bo1g102220 I 0.699
Bra023748 Brassica rapa Bra023748 I 0.699
POPTR_0014s04630 Populus trichocarpa POPTR_0014s04630 I 0.699
VIT_15s0021g01590 Vitis vinifera VIT_15s0021g01590 I 0.698
VIT_15s0021g01610 Vitis vinifera VIT_15s0021g01610 I 0.698
VIT_15s0021g01600 Vitis vinifera VIT_15s0021g01600 I 0.698
ERF098 Arabidopsis thaliana AT3G23230 D 0.698
Carubv10015406m.g Capsella rubella Carubv10015406m.g I 0.698
Lus10029314.g Linum usitatissimum Lus10029314.g I 0.698
Cagra.8559s0002 Capsella grandiflora Cagra.8559s0002 I 0.698
Bostr.19424s0320 Boechera stricta Bostr.19424s0320 I 0.698
Lus10016227.g Linum usitatissimum Lus10016227.g I 0.698
GLYMA03G26310 Glycine max GLYMA03G26310 I 0.697
Lus10029319.g Linum usitatissimum Lus10029319.g I 0.695
GLYMA18G48730 Glycine max GLYMA18G48730 I 0.695
Thhalv10029212m.g Eutrema salsugineum Thhalv10029212m.g I 0.694
GLYMA09G37780 Glycine max GLYMA09G37780 I 0.694
gene04916-v1.0-hybrid Fragaria vesca gene04916-v1.0-hybrid I 0.694
MDP0000122665 Malus domestica MDP0000122665 I 0.694
MDP0000135205 Malus domestica MDP0000135205 I 0.694
mgf021973m Mimulus guttatus mgf021973m I 0.693
Pm017698 Prunus mume Pm017698 I 0.693
PGSC0003DMG400010309 Solanum tuberosum PGSC0003DMG400010309 I 0.693
Solyc09g066350.1 Solanum lycopersicum Solyc09g066350.1 I 0.693
30174.m008759 Ricinus communis 30174.m008759 I 0.693
PRUPE_ppa023698mg Prunus persica PRUPE_ppa023698mg I 0.693
MTR_8g006815 Medicago truncatula MTR_8g006815 I 0.692
Cagra.4714s0001 Capsella grandiflora Cagra.4714s0001 I 0.692
Carubv10005868m.g Capsella rubella Carubv10005868m.g I 0.692
PRUPE_ppa025748mg Prunus persica PRUPE_ppa025748mg I 0.691
scaffold_604310.1 Arabidopsis lyrata scaffold_604310.1 I 0.691
MDP0000178398 Malus domestica MDP0000178398 I 0.691
GLYMA07G14070 Glycine max GLYMA07G14070 I 0.690
Eucgr.G00943 Eucalyptus grandis Eucgr.G00943 I 0.690
Cucsa.255330 Cucumis sativus Cucsa.255330 I 0.689
GLYMA03G26437 Glycine max GLYMA03G26437 I 0.689
fgenesh2_kg.471__1__AT3G23230.1 Arabidopsis lyrata fgenesh2_kg.471__1__AT3G23230.1 I 0.688
fgenesh2_kg.3__2538__AT3G23230.1 Arabidopsis lyrata fgenesh2_kg.3__2538__AT3G23230.1 I 0.688
Gorai.008G108400 Gossypium raimondii Gorai.008G108400 I 0.687
PRUPE_ppa020417mg Prunus persica PRUPE_ppa020417mg I 0.684
Pm017697 Prunus mume Pm017697 I 0.684
Eucgr.B01541 Eucalyptus grandis Eucgr.B01541 I 0.684
Eucgr.E01561 Eucalyptus grandis Eucgr.E01561 I 0.684
gene08075-v1.0-hybrid Fragaria vesca gene08075-v1.0-hybrid I 0.682
Cucsa.260030 Cucumis sativus Cucsa.260030 I 0.682
Cla021851 Citrullus lanatus Cla021851 I 0.682
Ca_06034 Cicer arietinum Ca_06034 I 0.681
PRUPE_ppa020642mg Prunus persica PRUPE_ppa020642mg I 0.681
mgf026487m Mimulus guttatus mgf026487m I 0.681
Pm020605 Prunus mume Pm020605 I 0.681
TRAES3BF046300130CFD_g Triticum aestivum TRAES3BF046300130CFD_g I 0.678
Eucgr.E01571 Eucalyptus grandis Eucgr.E01571 I 0.677
Bo9g001020 Brassica oleracea Bo9g001020 I 0.677
Ca_02325 Cicer arietinum Ca_02325 I 0.677
TCM_005704 Theobroma cacao TCM_005704 I 0.677
MTR_7g081795 Medicago truncatula MTR_7g081795 I 0.677
Solyc01g090310.2 Solanum lycopersicum Solyc01g090310.2 I 0.677
PGSC0003DMG400041045 Solanum tuberosum PGSC0003DMG400041045 I 0.677