CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
gene16050-v1.0-hybrid
(
Fragaria vesca
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02362 (B3)
IPR003340
gene16050-v1.0-hybrid
T023214_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mrna16050.1-v1.0-hybrid
B3
223
325
FAKILTPSEANNGGGFSVPRFCADSIFPPLNYQAEPPVQTLSVTDLHGVVWDFRHIYRGTPRRHLLTTGWSKFVNSKMLVAGDSVVFMRSSRGGEMYVGQVES
Links
Other
B3
family TFs
Other
Fragaria vesca
TFs
44 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
gene02234-v1.0-hybrid
Fragaria vesca
gene02234-v1.0-hybrid
I
0.928
PRUPE_ppa003136mg
Prunus persica
PRUPE_ppa003136mg
I
0.866
Pm019126
Prunus mume
Pm019126
I
0.845
MDP0000256621
Malus domestica
MDP0000256621
I
0.835
cassava36161.valid.m1
Manihot esculenta
cassava36161.valid.m1
I
0.814
POPTR_0005s16320
Populus trichocarpa
POPTR_0005s16320
I
0.804
chr1.LjT31L11.90.nd
Lotus japonicus
chr1.LjT31L11.90.nd
I
0.804
evm.TU.supercontig_49.122
Carica papaya
evm.TU.supercontig_49.122
I
0.804
SapurV1A.0331s0130
Salix purpurea
SapurV1A.0331s0130
I
0.804
SapurV1A.0010s0540
Salix purpurea
SapurV1A.0010s0540
I
0.804
TCM_035002
Theobroma cacao
TCM_035002
I
0.794
POPTR_0002s09050
Populus trichocarpa
POPTR_0002s09050
I
0.794
orange1.1g008078m.g
Citrus sinensis
orange1.1g008078m.g
I
0.784
Ciclev10000693m.g
Citrus clementina
Ciclev10000693m.g
I
0.784
29908.m005953
Ricinus communis
29908.m005953
I
0.784
Cla022413
Citrullus lanatus
Cla022413
I
0.763
Carubv10019991m.g
Capsella rubella
Carubv10019991m.g
N
0.753
Lus10024754.g
Linum usitatissimum
Lus10024754.g
N
0.753
Gorai.010G046000
Gossypium raimondii
Gorai.010G046000
I
0.753
Cagra.0096s0050
Capsella grandiflora
Cagra.0096s0050
N
0.753
Gorai.009G241900
Gossypium raimondii
Gorai.009G241900
I
0.742
Lus10024753.g
Linum usitatissimum
Lus10024753.g
N
0.742
Lus10009770.g
Linum usitatissimum
Lus10009770.g
N
0.742
GSMUA_Achr9G29480_001
Musa acuminata
GSMUA_Achr9G29480_001
I
0.732
ARF17
Arabidopsis thaliana
AT1G77850
N
0.732
Cucsa.381330
Cucumis sativus
Cucsa.381330
I
0.732
PDK_20s1359671g001
Phoenix dactylifera
PDK_20s1359671g001
I
0.724
MDP0000232116
Malus domestica
MDP0000232116
N
0.724
ARF17
Arabidopsis lyrata
scaffold_202748.1
N
0.722
Eucgr.F04380
Eucalyptus grandis
Eucgr.F04380
I
0.714
Bostr.20129s0222
Boechera stricta
Bostr.20129s0222
N
0.711
Bo6g081980
Brassica oleracea
Bo6g081980
N
0.711
Bra003665
Brassica rapa
Bra003665
N
0.711
MTR_3g073420
Medicago truncatula
MTR_3g073420
N
0.704
Pavir.Da00107
Panicum virgatum
Pavir.Da00107
I
0.701
BGIOSGA033142
Oryza indica
BGIOSGA033142
I
0.701
OGLUM10G13220
Oryza glumaepatula
OGLUM10G13220
I
0.701
ORGLA10G0115500
Oryza glaberrima
ORGLA10G0115500
I
0.701
ORUFI10G14150
Oryza rufipogon
ORUFI10G14150
I
0.701
OPUNC10G11840
Oryza punctata
OPUNC10G11840
I
0.701
ONIVA10G14700
Oryza nivara
ONIVA10G14700
I
0.701
ARF22
Oryza sativa
OS10G0479900
I
0.701
OMERI10G10210
Oryza meridionalis
OMERI10G10210
I
0.701
OBART10G13410
Oryza barthii
OBART10G13410
I
0.701